RNA–Protein interactions for RNA: ENST00000611278.4

ZNF248-208, Transcript of zinc finger protein 248, humanhuman

TSL 1 (best) BASIC

Gene ZNF248, Length 4,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248-208ENST00000611278 TNS3Q68CZ2 1445 aa11.78□□□□□ -0.52
ZNF248-208ENST00000611278 SEPT12Q8IYM1 358 aa11.78□□□□□ -0.52
ZNF248-208ENST00000611278 KRT27Q7Z3Y8 459 aa11.78□□□□□ -0.52
ZNF248-208ENST00000611278 ABTB2Q8N961 1025 aa11.78□□□□□ -0.52
ZNF248-208ENST00000611278 PMFBP1Q8TBY8 1022 aa11.78□□□□□ -0.52
ZNF248-208ENST00000611278 ONECUT3O60422 494 aaPredicted RBP11.77□□□□□ -0.53
ZNF248-208ENST00000611278 NEFMP07197 916 aa11.77□□□□□ -0.53
ZNF248-208ENST00000611278 CDCA7Q9BWT1 371 aaPredicted RBP11.75□□□□□ -0.53
ZNF248-208ENST00000611278 ZNF692Q9BU19 519 aaPredicted RBP11.75□□□□□ -0.53
ZNF248-208ENST00000611278 KCNH5Q8NCM2 988 aa11.75□□□□□ -0.53
ZNF248-208ENST00000611278 CFAP70Q5T0N1 1121 aa11.74□□□□□ -0.53
ZNF248-208ENST00000611278 TOM1L2Q6ZVM7 507 aa11.74□□□□□ -0.53
ZNF248-208ENST00000611278 HIRIP3Q9BW71 556 aaPredicted RBP11.74□□□□□ -0.53
ZNF248-208ENST00000611278 CCDC61Q9Y6R9 512 aa11.74□□□□□ -0.53
ZNF248-208ENST00000611278 ANKARQ7Z5J8 1434 aa11.74□□□□□ -0.53
ZNF248-208ENST00000611278 YTHDC2Q9H6S0 1430 aaKnown RBP11.73□□□□□ -0.53
ZNF248-208ENST00000611278 CENPJQ9HC77 1338 aaPredicted RBP11.73□□□□□ -0.53
ZNF248-208ENST00000611278 NLRP6P59044 892 aa11.73□□□□□ -0.53
ZNF248-208ENST00000611278 WAPLQ7Z5K2 1190 aa11.73□□□□□ -0.53
ZNF248-208ENST00000611278 USP35Q9P2H5 1018 aa11.73□□□□□ -0.53
ZNF248-208ENST00000611278 BRWD3Q6RI45 1802 aa11.73□□□□□ -0.53
ZNF248-208ENST00000611278 PLCH1Q4KWH8 1693 aa11.72□□□□□ -0.53
ZNF248-208ENST00000611278 CCER1Q8TC90 406 aaPredicted RBP11.72□□□□□ -0.53
ZNF248-208ENST00000611278 C14orf93Q9H972 538 aaKnown RBP11.72□□□□□ -0.53
ZNF248-208ENST00000611278 RGPD1P0DJD0 1748 aa11.72□□□□□ -0.53
ZNF248-208ENST00000611278 DEFB132Q7Z7B7 95 aa11.72□□□□□ -0.53
ZNF248-208ENST00000611278 CARD11Q9BXL7 1154 aa11.72□□□□□ -0.53
ZNF248-208ENST00000611278 NRXN1Q9ULB1 1477 aa11.72□□□□□ -0.53
ZNF248-208ENST00000611278 FAM196AQ6ZSG2 479 aa11.72□□□□□ -0.53
ZNF248-208ENST00000611278 SOX12O15370 315 aa11.71□□□□□ -0.53
ZNF248-208ENST00000611278 ADGRF5Q8IZF2 1346 aa11.71□□□□□ -0.53
ZNF248-208ENST00000611278 IFT172Q9UG01 1749 aa11.71□□□□□ -0.53
ZNF248-208ENST00000611278 PIK3C2GO75747 1445 aa11.71□□□□□ -0.53
ZNF248-208ENST00000611278 WASLO00401 505 aaPredicted RBP11.71□□□□□ -0.54
ZNF248-208ENST00000611278 SPATA31E1Q6ZUB1 1445 aa11.71□□□□□ -0.54
ZNF248-208ENST00000611278 BCL11BQ9C0K0 894 aaPredicted RBP11.7□□□□□ -0.54
ZNF248-208ENST00000611278 PARD3Q8TEW0 1356 aa11.7□□□□□ -0.54
ZNF248-208ENST00000611278 ADGRB2O60241 1585 aa11.7□□□□□ -0.54
ZNF248-208ENST00000611278 MSH5O43196 834 aa11.7□□□□□ -0.54
ZNF248-208ENST00000611278 DISP2A7MBM2 1401 aa11.7□□□□□ -0.54
ZNF248-208ENST00000611278 DIEXFQ68CQ4 756 aaKnown RBP11.7□□□□□ -0.54
ZNF248-208ENST00000611278 NUDT16Q96DE0 195 aaKnown RBP11.7□□□□□ -0.54
ZNF248-208ENST00000611278 COL14A1Q05707 1796 aaKnown RBP11.69□□□□□ -0.54
ZNF248-208ENST00000611278 DLC1Q96QB1 1528 aa11.69□□□□□ -0.54
ZNF248-208ENST00000611278 AMPHP49418 695 aa11.69□□□□□ -0.54
ZNF248-208ENST00000611278 STK32BQ9NY57 414 aa11.68□□□□□ -0.54
ZNF248-208ENST00000611278 ABCA3Q99758 1704 aa11.68□□□□□ -0.54
ZNF248-208ENST00000611278 KLHL34Q8N239 644 aa11.68□□□□□ -0.54
ZNF248-208ENST00000611278 BTG4Q9NY30 223 aa11.68□□□□□ -0.54
ZNF248-208ENST00000611278 PLEKHH1Q9ULM0 1364 aa11.67□□□□□ -0.54
ZNF248-208ENST00000611278 ZC3H6P61129 1189 aaKnown RBP11.67□□□□□ -0.54
ZNF248-208ENST00000611278 CDK19Q9BWU1 502 aa11.67□□□□□ -0.54
ZNF248-208ENST00000611278 NLRP2Q9NX02 1062 aa11.67□□□□□ -0.54
ZNF248-208ENST00000611278 ROCK2O75116 1388 aaKnown RBP11.67□□□□□ -0.54
ZNF248-208ENST00000611278 RAB3GAP2Q9H2M9 1393 aa11.67□□□□□ -0.54
ZNF248-208ENST00000611278 POLD1P28340 1107 aa11.67□□□□□ -0.54
ZNF248-208ENST00000611278 EXOC5O00471 708 aa11.66□□□□□ -0.54
ZNF248-208ENST00000611278 NRAPQ86VF7 1730 aa11.66□□□□□ -0.54
ZNF248-208ENST00000611278 TMF1P82094 1093 aa11.65□□□□□ -0.54
ZNF248-208ENST00000611278 APBA3O96018 575 aa11.65□□□□□ -0.54
ZNF248-208ENST00000611278 FAM83GA6ND36 823 aa11.65□□□□□ -0.54
ZNF248-208ENST00000611278 FAM98CQ17RN3 349 aaKnown RBP11.65□□□□□ -0.54
ZNF248-208ENST00000611278 COG3Q96JB2 828 aa11.65□□□□□ -0.55
ZNF248-208ENST00000611278 SPATA31A5Q5VU36 1347 aa11.64□□□□□ -0.55
ZNF248-208ENST00000611278 SPATA31A7Q8IWB4 1347 aa11.64□□□□□ -0.55
ZNF248-208ENST00000611278 BRD4O60885 1362 aaPredicted RBP11.64□□□□□ -0.55
ZNF248-208ENST00000611278 DDB1Q16531 1140 aa11.64□□□□□ -0.55
ZNF248-208ENST00000611278 CABLES1Q8TDN4 633 aa11.64□□□□□ -0.55
ZNF248-208ENST00000611278 PSDA5PKW4 1024 aaPredicted RBP11.64□□□□□ -0.55
ZNF248-208ENST00000611278 NUTM2GQ5VZR2 741 aa11.63□□□□□ -0.55
ZNF248-208ENST00000611278 RAPGEF4Q8WZA2 1011 aa11.63□□□□□ -0.55
ZNF248-208ENST00000611278 TCP11L2Q8N4U5 519 aa11.62□□□□□ -0.55
ZNF248-208ENST00000611278 RGPD8O14715 1765 aaPredicted RBP11.62□□□□□ -0.55
ZNF248-208ENST00000611278 EN1Q05925 392 aaPredicted RBP11.62□□□□□ -0.55
ZNF248-208ENST00000611278 BCL11AQ9H165 835 aa11.62□□□□□ -0.55
ZNF248-208ENST00000611278 TRPM3Q9HCF6 1732 aaPredicted RBP11.62□□□□□ -0.55
ZNF248-208ENST00000611278 THSD7AQ9UPZ6 1657 aa11.62□□□□□ -0.55
ZNF248-208ENST00000611278 TULP4Q9NRJ4 1543 aa11.62□□□□□ -0.55
ZNF248-208ENST00000611278 ALS2Q96Q42 1657 aa11.61□□□□□ -0.55
ZNF248-208ENST00000611278 ATP7BP35670 1465 aa11.61□□□□□ -0.55
ZNF248-208ENST00000611278 R3HDM1Q15032 1099 aaKnown RBP11.61□□□□□ -0.55
ZNF248-208ENST00000611278 NPHP1O15259 732 aa11.6□□□□□ -0.55
ZNF248-208ENST00000611278 SYTL4Q96C24 671 aaPredicted RBP11.6□□□□□ -0.55
ZNF248-208ENST00000611278 THRAP3Q9Y2W1 955 aaKnown RBP11.6□□□□□ -0.55
ZNF248-208ENST00000611278 PRKCSHP14314 528 aaPredicted RBP11.6□□□□□ -0.55
ZNF248-208ENST00000611278 SMG6Q86US8 1419 aaKnown RBP11.6□□□□□ -0.55
ZNF248-208ENST00000611278 WASHC2AQ641Q2 1341 aa11.59□□□□□ -0.55
ZNF248-208ENST00000611278 TNS1Q9HBL0 1735 aaKnown RBP11.59□□□□□ -0.55
ZNF248-208ENST00000611278 SPON1Q9HCB6 807 aa11.59□□□□□ -0.55
ZNF248-208ENST00000611278 ITSN1Q15811 1721 aa11.59□□□□□ -0.55
ZNF248-208ENST00000611278 SPATA31A1Q5TZJ5 1347 aa11.58□□□□□ -0.56
ZNF248-208ENST00000611278 TTC21AQ8NDW8 1320 aa11.58□□□□□ -0.56
ZNF248-208ENST00000611278 BARGINQ6ZT62 677 aa11.58□□□□□ -0.56
ZNF248-208ENST00000611278 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.58□□□□□ -0.564e-6■■■■□ 21.1
ZNF248-208ENST00000611278 CAMKK2Q96RR4 588 aa11.58□□□□□ -0.56
ZNF248-208ENST00000611278 NINLQ9Y2I6 1382 aa11.57□□□□□ -0.56
ZNF248-208ENST00000611278 PPM1GO15355 546 aaPredicted RBP11.57□□□□□ -0.56
ZNF248-208ENST00000611278 YY1P25490 414 aa11.56□□□□□ -0.56
ZNF248-208ENST00000611278 CHRNA2Q15822 529 aa11.56□□□□□ -0.56
ZNF248-208ENST00000611278 EZH2Q15910 746 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms