RNA–Protein interactions for RNA: ENST00000611150.3

CDK11B-205, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best)

Gene CDK11B, Length 2,350 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-205ENST00000611150 KIAA1107Q9UPP5 1409 aa20.99■□□□□ 0.95
CDK11B-205ENST00000611150 ZSCAN23Q3MJ62 389 aa20.99■□□□□ 0.95
CDK11B-205ENST00000611150 SEMA3FQ13275 785 aa20.98■□□□□ 0.95
CDK11B-205ENST00000611150 SYCP1Q15431 976 aa20.98■□□□□ 0.95
CDK11B-205ENST00000611150 TMX1Q9H3N1 280 aa20.98■□□□□ 0.95
CDK11B-205ENST00000611150 OS9Q13438 667 aaPredicted RBP20.97■□□□□ 0.95
CDK11B-205ENST00000611150 SMC5Q8IY18 1101 aa20.97■□□□□ 0.95
CDK11B-205ENST00000611150 RNF217Q8TC41 542 aa20.97■□□□□ 0.95
CDK11B-205ENST00000611150 GLI2P10070 1586 aa20.97■□□□□ 0.95
CDK11B-205ENST00000611150 TSPOAP1O95153 1857 aa20.97■□□□□ 0.95
CDK11B-205ENST00000611150 MNS1Q8NEH6 495 aa20.96■□□□□ 0.95
CDK11B-205ENST00000611150 C22orf23Q9BZE7 217 aa20.96■□□□□ 0.95
CDK11B-205ENST00000611150 HMGB1P09429 215 aaKnown RBP20.95■□□□□ 0.94
CDK11B-205ENST00000611150 SPTLC3Q9NUV7 552 aa20.95■□□□□ 0.94
CDK11B-205ENST00000611150 RAD50Q92878 1312 aa20.95■□□□□ 0.94
CDK11B-205ENST00000611150 NPC1L1Q9UHC9 1359 aa20.95■□□□□ 0.94
CDK11B-205ENST00000611150 EIF3AQ14152 1382 aaKnown RBP20.94■□□□□ 0.94
CDK11B-205ENST00000611150 RIOK3O14730 519 aaKnown RBP20.94■□□□□ 0.94
CDK11B-205ENST00000611150 CASQ1P31415 396 aa20.94■□□□□ 0.94
CDK11B-205ENST00000611150 EPRSP07814 1512 aaKnown RBP20.94■□□□□ 0.94
CDK11B-205ENST00000611150 PRIM1P49642 420 aaKnown RBP20.94■□□□□ 0.94
CDK11B-205ENST00000611150 MYBBP1AQ9BQG0 1328 aaKnown RBP20.93■□□□□ 0.94
CDK11B-205ENST00000611150 CYP2C19P33261 490 aa20.93■□□□□ 0.94
CDK11B-205ENST00000611150 TDO2P48775 406 aa20.93■□□□□ 0.94
CDK11B-205ENST00000611150 CLEC17AQ6ZS10 378 aa20.93■□□□□ 0.94
CDK11B-205ENST00000611150 KIF18AQ8NI77 898 aa20.93■□□□□ 0.94
CDK11B-205ENST00000611150 CCDC18Q5T9S5 1454 aa20.92■□□□□ 0.94
CDK11B-205ENST00000611150 CAVIN1Q6NZI2 390 aaKnown RBP20.92■□□□□ 0.94
CDK11B-205ENST00000611150 WDR7Q9Y4E6 1490 aa20.92■□□□□ 0.94
CDK11B-205ENST00000611150 RBM28Q9NW13 759 aaKnown RBP20.92■□□□□ 0.94
CDK11B-205ENST00000611150 NBPF11Q86T75 865 aa20.91■□□□□ 0.94
CDK11B-205ENST00000611150 REC8O95072 547 aa20.9■□□□□ 0.94
CDK11B-205ENST00000611150 ZNF853P0CG23 659 aa20.9■□□□□ 0.94
CDK11B-205ENST00000611150 SETQ01105 290 aaPredicted RBP20.9■□□□□ 0.94
CDK11B-205ENST00000611150 NCBP1Q09161 790 aaKnown RBP20.9■□□□□ 0.94
CDK11B-205ENST00000611150 SPATA31E1Q6ZUB1 1445 aa20.9■□□□□ 0.94
CDK11B-205ENST00000611150 GOLGA6L1Q8N7Z2 621 aa20.9■□□□□ 0.94
CDK11B-205ENST00000611150 TOMM22Q9NS69 142 aa20.9■□□□□ 0.94
CDK11B-205ENST00000611150 STK26Q9P289 416 aa20.9■□□□□ 0.94
CDK11B-205ENST00000611150 EFCAB5A4FU69 1503 aa20.9■□□□□ 0.94
CDK11B-205ENST00000611150 FHOD3Q2V2M9 1422 aa20.89■□□□□ 0.94
CDK11B-205ENST00000611150 MED4Q9NPJ6 270 aa20.89■□□□□ 0.94
CDK11B-205ENST00000611150 ARHGAP31Q2M1Z3 1444 aa20.89■□□□□ 0.93
CDK11B-205ENST00000611150 IGHDP01880 384 aa20.88■□□□□ 0.93
CDK11B-205ENST00000611150 SNX21Q969T3 373 aa20.88■□□□□ 0.93
CDK11B-205ENST00000611150 RAPGEF6Q8TEU7 1601 aa20.88■□□□□ 0.93
CDK11B-205ENST00000611150 NBPF9Q3BBW0 867 aa20.87■□□□□ 0.93
CDK11B-205ENST00000611150 SGSM3Q96HU1 749 aa20.87■□□□□ 0.93
CDK11B-205ENST00000611150 JRKLQ9Y4A0 524 aa20.87■□□□□ 0.93
CDK11B-205ENST00000611150 CFAP65Q6ZU64 1925 aaKnown RBP20.87■□□□□ 0.93
CDK11B-205ENST00000611150 SRPK2P78362 688 aaKnown RBP20.87■□□□□ 0.93
CDK11B-205ENST00000611150 MPNDQ8N594 471 aa20.87■□□□□ 0.93
CDK11B-205ENST00000611150 PLEKHH2Q8IVE3 1493 aa20.86■□□□□ 0.93
CDK11B-205ENST00000611150 MAP3K4Q9Y6R4 1608 aa20.86■□□□□ 0.93
CDK11B-205ENST00000611150 SSR1P43307 286 aaKnown RBP20.86■□□□□ 0.93
CDK11B-205ENST00000611150 MUM1L1Q5H9M0 696 aa20.86■□□□□ 0.93
CDK11B-205ENST00000611150 CCDC91Q7Z6B0 441 aa20.86■□□□□ 0.93
CDK11B-205ENST00000611150 CXorf56Q9H5V9 222 aa20.86■□□□□ 0.93
CDK11B-205ENST00000611150 PPRC1Q5VV67 1664 aaKnown RBP20.86■□□□□ 0.93
CDK11B-205ENST00000611150 ATP10BO94823 1461 aa20.86■□□□□ 0.93
CDK11B-205ENST00000611150 KIF15Q9NS87 1388 aa20.86■□□□□ 0.93
CDK11B-205ENST00000611150 SUFUQ9UMX1 484 aa20.86■□□□□ 0.93
CDK11B-205ENST00000611150 KDM6BO15054 1643 aa20.85■□□□□ 0.93
CDK11B-205ENST00000611150 RTEL1-TNFRSF6BF6WH68 1400 aa20.85■□□□□ 0.93
CDK11B-205ENST00000611150 TTC36A6NLP5 189 aa20.85■□□□□ 0.93
CDK11B-205ENST00000611150 LRSAM1Q6UWE0 723 aa20.85■□□□□ 0.93
CDK11B-205ENST00000611150 ARID3CA6NKF2 412 aa20.85■□□□□ 0.93
CDK11B-205ENST00000611150 DEF6Q9H4E7 631 aa20.84■□□□□ 0.93
CDK11B-205ENST00000611150 BAG4O95429 457 aaKnown RBP20.83■□□□□ 0.93
CDK11B-205ENST00000611150 CALRP27797 417 aaKnown RBP20.83■□□□□ 0.93
CDK11B-205ENST00000611150 GYS2P54840 703 aa20.83■□□□□ 0.93
CDK11B-205ENST00000611150 C10orf67Q8IYJ2 551 aa20.83■□□□□ 0.93
CDK11B-205ENST00000611150 NOL10Q9BSC4 688 aaKnown RBP20.83■□□□□ 0.93
CDK11B-205ENST00000611150 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.83■□□□□ 0.92
CDK11B-205ENST00000611150 MYO1CO00159 1063 aa20.82■□□□□ 0.92
CDK11B-205ENST00000611150 PSMD1Q99460 953 aa20.82■□□□□ 0.92
CDK11B-205ENST00000611150 NBPF10Q6P3W6 841 aaKnown RBP20.81■□□□□ 0.92
CDK11B-205ENST00000611150 DRC1Q96MC2 740 aa20.81■□□□□ 0.92
CDK11B-205ENST00000611150 INSRP06213 1382 aa20.81■□□□□ 0.92
CDK11B-205ENST00000611150 TIAM1Q13009 1591 aa20.81■□□□□ 0.92
CDK11B-205ENST00000611150 MIA2Q96PC5 1412 aa20.81■□□□□ 0.92
CDK11B-205ENST00000611150 FAM53CQ9NYF3 392 aa20.81■□□□□ 0.92
CDK11B-205ENST00000611150 POLKQ9UBT6 870 aa20.8■□□□□ 0.92
CDK11B-205ENST00000611150 DNAJC21Q5F1R6 531 aaKnown RBP20.8■□□□□ 0.92
CDK11B-205ENST00000611150 NUP153P49790 1475 aaKnown RBP20.79■□□□□ 0.92
CDK11B-205ENST00000611150 TNNT1P13805 278 aa20.79■□□□□ 0.92
CDK11B-205ENST00000611150 TEX14Q8IWB6 1497 aa20.79■□□□□ 0.92
CDK11B-205ENST00000611150 A0A1B0GUL7 405 aa20.79■□□□□ 0.92
CDK11B-205ENST00000611150 LRCH2Q5VUJ6 765 aa20.79■□□□□ 0.92
CDK11B-205ENST00000611150 TXLNBQ8N3L3 684 aa20.79■□□□□ 0.92
CDK11B-205ENST00000611150 ARHGAP35Q9NRY4 1499 aa20.78■□□□□ 0.92
CDK11B-205ENST00000611150 ATP2B1P20020 1258 aa20.78■□□□□ 0.92
CDK11B-205ENST00000611150 SSFA2P28290 1259 aa20.78■□□□□ 0.92
CDK11B-205ENST00000611150 SYT10Q6XYQ8 523 aa20.78■□□□□ 0.92
CDK11B-205ENST00000611150 CFAP43Q8NDM7 1665 aa20.78■□□□□ 0.92
CDK11B-205ENST00000611150 CCDC189A1A4V9 331 aa20.78■□□□□ 0.92
CDK11B-205ENST00000611150 PPP1R12AO14974 1030 aaPredicted RBP20.78■□□□□ 0.92
CDK11B-205ENST00000611150 BSDC1Q9NW68 430 aaPredicted RBP20.78■□□□□ 0.92
CDK11B-205ENST00000611150 TERF2IPQ9NYB0 399 aa20.78■□□□□ 0.92
CDK11B-205ENST00000611150 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms