RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 PRR36Q9H6K5 1346 aa20.69■□□□□ 0.9
RTN1-209ENST00000611068 DLC1Q96QB1 1528 aa20.68■□□□□ 0.9
RTN1-209ENST00000611068 PPIP5K1Q6PFW1 1433 aa20.68■□□□□ 0.9
RTN1-209ENST00000611068 TBX22Q9Y458 520 aa20.68■□□□□ 0.9
RTN1-209ENST00000611068 CEP170BQ9Y4F5 1589 aaPredicted RBP20.68■□□□□ 0.9
RTN1-209ENST00000611068 RBM10P98175 930 aaKnown RBP20.68■□□□□ 0.9
RTN1-209ENST00000611068 BACH2Q9BYV9 841 aa20.68■□□□□ 0.9
RTN1-209ENST00000611068 ARHGAP23Q9P227 1491 aa20.67■□□□□ 0.9
RTN1-209ENST00000611068 PMFBP1Q8TBY8 1022 aa20.67■□□□□ 0.9
RTN1-209ENST00000611068 SLIT1O75093 1534 aa20.67■□□□□ 0.9
RTN1-209ENST00000611068 RRP9O43818 475 aaKnown RBP20.67■□□□□ 0.9
RTN1-209ENST00000611068 NME9Q86XW9 330 aa20.66■□□□□ 0.9
RTN1-209ENST00000611068 NEUROD2Q15784 382 aa20.66■□□□□ 0.9
RTN1-209ENST00000611068 CCDC61Q9Y6R9 512 aa20.66■□□□□ 0.9
RTN1-209ENST00000611068 NAP1L5Q96NT1 182 aaPredicted RBP20.65■□□□□ 0.9
RTN1-209ENST00000611068 ADAMTSL3P82987 1691 aa20.65■□□□□ 0.9
RTN1-209ENST00000611068 APAF1O14727 1248 aa20.65■□□□□ 0.9
RTN1-209ENST00000611068 NUDCQ9Y266 331 aa20.64■□□□□ 0.9
RTN1-209ENST00000611068 FAM135BQ49AJ0 1406 aa20.63■□□□□ 0.89
RTN1-209ENST00000611068 MED14O60244 1454 aa20.63■□□□□ 0.89
RTN1-209ENST00000611068 RNF123Q5XPI4 1314 aa20.63■□□□□ 0.89
RTN1-209ENST00000611068 RRP7AQ9Y3A4 280 aaKnown RBP20.63■□□□□ 0.89
RTN1-209ENST00000611068 SOX12O15370 315 aa20.62■□□□□ 0.89
RTN1-209ENST00000611068 TECPR2O15040 1411 aa20.62■□□□□ 0.89
RTN1-209ENST00000611068 TCERG1O14776 1098 aaKnown RBP20.62■□□□□ 0.89
RTN1-209ENST00000611068 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.62■□□□□ 0.89
RTN1-209ENST00000611068 NINLQ9Y2I6 1382 aa20.61■□□□□ 0.89
RTN1-209ENST00000611068 FRAT2O75474 233 aaPredicted RBP20.61■□□□□ 0.89
RTN1-209ENST00000611068 HSP90AA1P07900 732 aaKnown RBP20.61■□□□□ 0.89
RTN1-209ENST00000611068 SIRT1Q96EB6 747 aa20.61■□□□□ 0.89
RTN1-209ENST00000611068 U2SURPO15042 1029 aaKnown RBP20.6■□□□□ 0.89
RTN1-209ENST00000611068 AAMPQ13685 434 aa20.6■□□□□ 0.89
RTN1-209ENST00000611068 CPS1P31327 1500 aa20.6■□□□□ 0.89
RTN1-209ENST00000611068 BLMP54132 1417 aaPredicted RBP20.6■□□□□ 0.89
RTN1-209ENST00000611068 SMG6Q86US8 1419 aaKnown RBP20.59■□□□□ 0.89
RTN1-209ENST00000611068 U2AF1L5P0DN76 240 aaPredicted RBP20.58■□□□□ 0.89
RTN1-209ENST00000611068 HSPA2P54652 639 aa20.58■□□□□ 0.89
RTN1-209ENST00000611068 U2AF1Q01081 240 aaKnown RBP eCLIP20.58■□□□□ 0.89
RTN1-209ENST00000611068 ACEP12821 1306 aa20.58■□□□□ 0.89
RTN1-209ENST00000611068 CFAP53Q96M91 514 aa20.57■□□□□ 0.88
RTN1-209ENST00000611068 POLR3AO14802 1390 aaPredicted RBP20.56■□□□□ 0.88
RTN1-209ENST00000611068 RRS1Q15050 365 aaKnown RBP20.56■□□□□ 0.88
RTN1-209ENST00000611068 C14orf37Q86TY3 774 aa20.56■□□□□ 0.88
RTN1-209ENST00000611068 DDRGK1Q96HY6 314 aa20.55■□□□□ 0.88
RTN1-209ENST00000611068 KNDC1Q76NI1 1749 aa20.55■□□□□ 0.88
RTN1-209ENST00000611068 FGD1P98174 961 aa20.55■□□□□ 0.88
RTN1-209ENST00000611068 EMILIN1Q9Y6C2 1016 aa20.55■□□□□ 0.88
RTN1-209ENST00000611068 ATP7BP35670 1465 aa20.54■□□□□ 0.88
RTN1-209ENST00000611068 DMRT2Q9Y5R5 561 aa20.54■□□□□ 0.88
RTN1-209ENST00000611068 NGDNQ8NEJ9 315 aaKnown RBP20.54■□□□□ 0.88
RTN1-209ENST00000611068 NSD2O96028 1365 aa20.53■□□□□ 0.88
RTN1-209ENST00000611068 NUTM2GQ5VZR2 741 aa20.53■□□□□ 0.88
RTN1-209ENST00000611068 SPINK5Q9NQ38 1064 aaPredicted RBP20.53■□□□□ 0.88
RTN1-209ENST00000611068 SETD1BQ9UPS6 1966 aaKnown RBP20.53■□□□□ 0.88
RTN1-209ENST00000611068 CPSF1Q10570 1443 aaKnown RBP20.52■□□□□ 0.88
RTN1-209ENST00000611068 SKAP1Q86WV1 359 aa20.52■□□□□ 0.87
RTN1-209ENST00000611068 POLKQ9UBT6 870 aa20.51■□□□□ 0.87
RTN1-209ENST00000611068 USP32Q8NFA0 1604 aa20.51■□□□□ 0.87
RTN1-209ENST00000611068 COG3Q96JB2 828 aa20.51■□□□□ 0.87
RTN1-209ENST00000611068 PNNQ9H307 717 aaKnown RBP20.51■□□□□ 0.87
RTN1-209ENST00000611068 TCP11L2Q8N4U5 519 aa20.49■□□□□ 0.87
RTN1-209ENST00000611068 NKTRP30414 1462 aaKnown RBP20.48■□□□□ 0.87
RTN1-209ENST00000611068 PLIN1O60240 522 aa20.48■□□□□ 0.87
RTN1-209ENST00000611068 MS4A1P11836 297 aa20.48■□□□□ 0.87
RTN1-209ENST00000611068 EXOC6Q8TAG9 804 aa20.48■□□□□ 0.87
RTN1-209ENST00000611068 EDC4Q6P2E9 1401 aaKnown RBP20.48■□□□□ 0.87
RTN1-209ENST00000611068 RCAN3Q9UKA8 241 aa20.48■□□□□ 0.87
RTN1-209ENST00000611068 ZNF692Q9BU19 519 aaPredicted RBP20.47■□□□□ 0.87
RTN1-209ENST00000611068 TTC21BQ7Z4L5 1316 aa20.47■□□□□ 0.87
RTN1-209ENST00000611068 NPHP4O75161 1426 aaPredicted RBP20.47■□□□□ 0.87
RTN1-209ENST00000611068 GOLGA2Q08379 1002 aa20.46■□□□□ 0.87
RTN1-209ENST00000611068 DIAPH1O60610 1272 aaKnown RBP20.46■□□□□ 0.87
RTN1-209ENST00000611068 HMOX1P09601 288 aa20.46■□□□□ 0.87
RTN1-209ENST00000611068 PTCH1Q13635 1447 aa20.46■□□□□ 0.87
RTN1-209ENST00000611068 RGPD8O14715 1765 aaPredicted RBP20.46■□□□□ 0.87
RTN1-209ENST00000611068 PLEKHG3A1L390 1219 aa20.45■□□□□ 0.86
RTN1-209ENST00000611068 PDE3BQ13370 1112 aa20.45■□□□□ 0.86
RTN1-209ENST00000611068 RUNDC1Q96C34 613 aa20.45■□□□□ 0.86
RTN1-209ENST00000611068 CDC42BPGQ6DT37 1551 aa20.45■□□□□ 0.86
RTN1-209ENST00000611068 SHPRHQ149N8 1683 aa20.45■□□□□ 0.86
RTN1-209ENST00000611068 KDM4FA0A1W2PPD8 638 aa20.44■□□□□ 0.86
RTN1-209ENST00000611068 XPCQ01831 940 aaPredicted RBP20.44■□□□□ 0.86
RTN1-209ENST00000611068 DIP2AQ14689 1571 aa20.44■□□□□ 0.86
RTN1-209ENST00000611068 PDE4CQ08493 712 aa20.43■□□□□ 0.86
RTN1-209ENST00000611068 ESCO1Q5FWF5 840 aa20.43■□□□□ 0.86
RTN1-209ENST00000611068 PRDM4Q9UKN5 801 aa20.43■□□□□ 0.86
RTN1-209ENST00000611068 ZNF142P52746 1687 aaPredicted RBP20.43■□□□□ 0.86
RTN1-209ENST00000611068 KIF20BQ96Q89 1820 aa20.42■□□□□ 0.86
RTN1-209ENST00000611068 PROSER2Q86WR7 435 aaPredicted RBP20.42■□□□□ 0.86
RTN1-209ENST00000611068 ZNF521Q96K83 1311 aa20.42■□□□□ 0.86
RTN1-209ENST00000611068 DUSP27Q5VZP5 1158 aa20.42■□□□□ 0.86
RTN1-209ENST00000611068 WWC1Q8IX03 1113 aa20.42■□□□□ 0.86
RTN1-209ENST00000611068 XRN1Q8IZH2 1706 aaKnown RBP20.41■□□□□ 0.86
RTN1-209ENST00000611068 INSRP06213 1382 aa20.4■□□□□ 0.86
RTN1-209ENST00000611068 USP6P35125 1406 aa20.4■□□□□ 0.86
RTN1-209ENST00000611068 CLCN1P35523 988 aa20.4■□□□□ 0.86
RTN1-209ENST00000611068 ADGRB2O60241 1585 aa20.39■□□□□ 0.85
RTN1-209ENST00000611068 RGS3P49796 1198 aa20.39■□□□□ 0.85
RTN1-209ENST00000611068 SLFN5Q08AF3 891 aa20.39■□□□□ 0.85
RTN1-209ENST00000611068 ARXQ96QS3 562 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms