RNA–Protein interactions for RNA: ENST00000611067.4

SEMA3B-210, Transcript of semaphorin 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-210ENST00000611067 MED14O60244 1454 aa24.57■■□□□ 1.52
SEMA3B-210ENST00000611067 SLC26A8Q96RN1 970 aa24.57■■□□□ 1.52
SEMA3B-210ENST00000611067 ZNF142P52746 1687 aaPredicted RBP24.57■■□□□ 1.52
SEMA3B-210ENST00000611067 USP32Q8NFA0 1604 aa24.56■■□□□ 1.52
SEMA3B-210ENST00000611067 SETD1BQ9UPS6 1966 aaKnown RBP24.56■■□□□ 1.52
SEMA3B-210ENST00000611067 VIRMAQ69YN4 1812 aaKnown RBP24.56■■□□□ 1.52
SEMA3B-210ENST00000611067 TRMT2AQ8IZ69 625 aaKnown RBP24.56■■□□□ 1.52
SEMA3B-210ENST00000611067 DIP2AQ14689 1571 aa24.55■■□□□ 1.52
SEMA3B-210ENST00000611067 CGNL1Q0VF96 1302 aa24.55■■□□□ 1.52
SEMA3B-210ENST00000611067 TERF2IPQ9NYB0 399 aa24.53■■□□□ 1.52
SEMA3B-210ENST00000611067 TBX22Q9Y458 520 aa24.53■■□□□ 1.52
SEMA3B-210ENST00000611067 A0A1W2PP64 1363 aa24.52■■□□□ 1.52
SEMA3B-210ENST00000611067 NKTRP30414 1462 aaKnown RBP24.51■■□□□ 1.51
SEMA3B-210ENST00000611067 ROBO2Q9HCK4 1378 aa24.51■■□□□ 1.51
SEMA3B-210ENST00000611067 WASLO00401 505 aaPredicted RBP24.5■■□□□ 1.51
SEMA3B-210ENST00000611067 FAM43AQ8N2R8 423 aa24.5■■□□□ 1.51
SEMA3B-210ENST00000611067 NSD2O96028 1365 aa24.49■■□□□ 1.51
SEMA3B-210ENST00000611067 HDGFL2Q7Z4V5 671 aaPredicted RBP24.49■■□□□ 1.51
SEMA3B-210ENST00000611067 MORC1Q86VD1 984 aa24.49■■□□□ 1.51
SEMA3B-210ENST00000611067 PTPRUQ92729 1446 aa24.48■■□□□ 1.51
SEMA3B-210ENST00000611067 USP19O94966 1318 aa24.47■■□□□ 1.51
SEMA3B-210ENST00000611067 ANKLE2Q86XL3 938 aa24.47■■□□□ 1.51
SEMA3B-210ENST00000611067 CABP1Q9NZU7 370 aa24.46■■□□□ 1.51
SEMA3B-210ENST00000611067 AMOTL2Q9Y2J4 779 aa24.46■■□□□ 1.51
SEMA3B-210ENST00000611067 CD163L1Q9NR16 1453 aa24.45■■□□□ 1.5
SEMA3B-210ENST00000611067 ATP7BP35670 1465 aa24.44■■□□□ 1.5
SEMA3B-210ENST00000611067 PTCH1Q13635 1447 aa24.44■■□□□ 1.5
SEMA3B-210ENST00000611067 SPINK5Q9NQ38 1064 aaPredicted RBP24.44■■□□□ 1.5
SEMA3B-210ENST00000611067 ADGRB2O60241 1585 aa24.43■■□□□ 1.5
SEMA3B-210ENST00000611067 E9PSI1 815 aa24.43■■□□□ 1.5
SEMA3B-210ENST00000611067 BCAR3O75815 825 aa24.43■■□□□ 1.5
SEMA3B-210ENST00000611067 MAPK8IP3Q9UPT6 1336 aa24.42■■□□□ 1.5
SEMA3B-210ENST00000611067 IGHDP01880 384 aa24.42■■□□□ 1.5
SEMA3B-210ENST00000611067 PPIP5K1Q6PFW1 1433 aa24.41■■□□□ 1.5
SEMA3B-210ENST00000611067 PIK3R4Q99570 1358 aa24.41■■□□□ 1.5
SEMA3B-210ENST00000611067 CCDC146Q8IYE0 955 aa24.41■■□□□ 1.5
SEMA3B-210ENST00000611067 RSPH6AQ9H0K4 717 aa24.41■■□□□ 1.5
SEMA3B-210ENST00000611067 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.41■■□□□ 1.5
SEMA3B-210ENST00000611067 PDE3AQ14432 1141 aa24.4■■□□□ 1.5
SEMA3B-210ENST00000611067 BECN1Q14457 450 aa24.4■■□□□ 1.5
SEMA3B-210ENST00000611067 APAF1O14727 1248 aa24.4■■□□□ 1.5
SEMA3B-210ENST00000611067 TNNT2P45379 298 aaPredicted RBP24.4■■□□□ 1.5
SEMA3B-210ENST00000611067 NGEFQ8N5V2 710 aa24.4■■□□□ 1.5
SEMA3B-210ENST00000611067 UBE2Q2Q8WVN8 375 aa24.4■■□□□ 1.5
SEMA3B-210ENST00000611067 NUDT16Q96DE0 195 aaKnown RBP24.4■■□□□ 1.5
SEMA3B-210ENST00000611067 XRN1Q8IZH2 1706 aaKnown RBP24.39■■□□□ 1.5
SEMA3B-210ENST00000611067 CCDC61Q9Y6R9 512 aa24.38■■□□□ 1.49
SEMA3B-210ENST00000611067 EIF5BO60841 1220 aaKnown RBP24.36■■□□□ 1.49
SEMA3B-210ENST00000611067 ANKRD26Q9UPS8 1709 aa24.35■■□□□ 1.49
SEMA3B-210ENST00000611067 POLR3AO14802 1390 aaPredicted RBP24.35■■□□□ 1.49
SEMA3B-210ENST00000611067 CLUAP1Q96AJ1 413 aa24.35■■□□□ 1.49
SEMA3B-210ENST00000611067 SEC24BO95487 1268 aa24.35■■□□□ 1.49
SEMA3B-210ENST00000611067 KIF20BQ96Q89 1820 aa24.34■■□□□ 1.49
SEMA3B-210ENST00000611067 GGNBP2Q9H3C7 697 aa24.34■■□□□ 1.49
SEMA3B-210ENST00000611067 CDC42BPGQ6DT37 1551 aa24.34■■□□□ 1.49
SEMA3B-210ENST00000611067 FYB1O15117 783 aa24.33■■□□□ 1.49
SEMA3B-210ENST00000611067 CPSF1Q10570 1443 aaKnown RBP24.33■■□□□ 1.48
SEMA3B-210ENST00000611067 KCNA6P17658 529 aa24.32■■□□□ 1.48
SEMA3B-210ENST00000611067 ITSN1Q15811 1721 aa24.31■■□□□ 1.48
SEMA3B-210ENST00000611067 PRR36Q9H6K5 1346 aa24.31■■□□□ 1.48
SEMA3B-210ENST00000611067 L1TD1Q5T7N2 865 aaKnown RBP24.31■■□□□ 1.48
SEMA3B-210ENST00000611067 EDC4Q6P2E9 1401 aaKnown RBP24.31■■□□□ 1.48
SEMA3B-210ENST00000611067 CFAP53Q96M91 514 aa24.3■■□□□ 1.48
SEMA3B-210ENST00000611067 NPHP4O75161 1426 aaPredicted RBP24.3■■□□□ 1.48
SEMA3B-210ENST00000611067 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.3■■□□□ 1.48
SEMA3B-210ENST00000611067 NCKAP5LQ9HCH0 1330 aa24.3■■□□□ 1.48
SEMA3B-210ENST00000611067 CHD2O14647 1828 aaKnown RBP24.29■■□□□ 1.48
SEMA3B-210ENST00000611067 MTHFSP49914 203 aa24.29■■□□□ 1.48
SEMA3B-210ENST00000611067 ANTXR1Q9H6X2 564 aa24.29■■□□□ 1.48
SEMA3B-210ENST00000611067 DMRT2Q9Y5R5 561 aa24.29■■□□□ 1.48
SEMA3B-210ENST00000611067 TOPAZ1Q8N9V7 1692 aa24.28■■□□□ 1.48
SEMA3B-210ENST00000611067 MON2Q7Z3U7 1717 aa24.28■■□□□ 1.48
SEMA3B-210ENST00000611067 SLKQ9H2G2 1235 aaPredicted RBP24.28■■□□□ 1.48
SEMA3B-210ENST00000611067 AKAP12Q02952 1782 aa24.27■■□□□ 1.48
SEMA3B-210ENST00000611067 AAMPQ13685 434 aa24.27■■□□□ 1.48
SEMA3B-210ENST00000611067 COG6Q9Y2V7 657 aa24.27■■□□□ 1.48
SEMA3B-210ENST00000611067 NUTM2FA1L443 756 aa24.27■■□□□ 1.48
SEMA3B-210ENST00000611067 ZNF692Q9BU19 519 aaPredicted RBP24.27■■□□□ 1.48
SEMA3B-210ENST00000611067 CANXP27824 592 aaKnown RBP24.26■■□□□ 1.47
SEMA3B-210ENST00000611067 PANK1Q8TE04 598 aa24.26■■□□□ 1.47
SEMA3B-210ENST00000611067 PMFBP1Q8TBY8 1022 aa24.25■■□□□ 1.47
SEMA3B-210ENST00000611067 UPF2Q9HAU5 1272 aaKnown RBP24.24■■□□□ 1.47
SEMA3B-210ENST00000611067 TBC1D32Q96NH3 1257 aa24.23■■□□□ 1.47
SEMA3B-210ENST00000611067 SHPRHQ149N8 1683 aa24.23■■□□□ 1.47
SEMA3B-210ENST00000611067 WWC1Q8IX03 1113 aa24.23■■□□□ 1.47
SEMA3B-210ENST00000611067 PLEKHG3A1L390 1219 aa24.22■■□□□ 1.47
SEMA3B-210ENST00000611067 ACEP12821 1306 aa24.2■■□□□ 1.47
SEMA3B-210ENST00000611067 TBC1D2Q9BYX2 928 aa24.19■■□□□ 1.46
SEMA3B-210ENST00000611067 RRAGDQ9NQL2 400 aaPredicted RBP24.19■■□□□ 1.46
SEMA3B-210ENST00000611067 NME9Q86XW9 330 aa24.18■■□□□ 1.46
SEMA3B-210ENST00000611067 ANKARQ7Z5J8 1434 aa24.17■■□□□ 1.46
SEMA3B-210ENST00000611067 RARSP54136 660 aaKnown RBP24.17■■□□□ 1.46
SEMA3B-210ENST00000611067 COG3Q96JB2 828 aa24.16■■□□□ 1.46
SEMA3B-210ENST00000611067 NALCNQ8IZF0 1738 aa24.16■■□□□ 1.46
SEMA3B-210ENST00000611067 FMN2Q9NZ56 1722 aa24.16■■□□□ 1.46
SEMA3B-210ENST00000611067 PCDHB15Q9Y5E8 787 aa24.15■■□□□ 1.46
SEMA3B-210ENST00000611067 USP6P35125 1406 aa24.15■■□□□ 1.46
SEMA3B-210ENST00000611067 NRKQ7Z2Y5 1582 aa24.15■■□□□ 1.46
SEMA3B-210ENST00000611067 RGPD8O14715 1765 aaPredicted RBP24.15■■□□□ 1.46
SEMA3B-210ENST00000611067 PDZRN3Q9UPQ7 1066 aa24.14■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms