RNA–Protein interactions for RNA: ENST00000609293.1

LINC01990-201, Transcript of long intergenic non-protein coding RNA 1990, humanhuman

TSL 1 (best) BASIC

Gene LINC01990, Length 1,487 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01990-201ENST00000609293 SYCP2Q9BX26 1530 aa12.42□□□□□ -0.42
LINC01990-201ENST00000609293 CEP170BQ9Y4F5 1589 aaPredicted RBP12.41□□□□□ -0.42
LINC01990-201ENST00000609293 UBAP1LF5GYI3 381 aa12.41□□□□□ -0.42
LINC01990-201ENST00000609293 LAPTM4AQ15012 233 aa12.41□□□□□ -0.42
LINC01990-201ENST00000609293 NUDT18Q6ZVK8 323 aa12.41□□□□□ -0.42
LINC01990-201ENST00000609293 IL21Q9HBE4 155 aa12.41□□□□□ -0.42
LINC01990-201ENST00000609293 RTN4Q9NQC3 1192 aaKnown RBP12.41□□□□□ -0.42
LINC01990-201ENST00000609293 ZMYM3Q14202 1370 aa12.41□□□□□ -0.42
LINC01990-201ENST00000609293 SLC4A3P48751 1232 aa12.4□□□□□ -0.42
LINC01990-201ENST00000609293 TJAP1Q5JTD0 557 aa12.4□□□□□ -0.42
LINC01990-201ENST00000609293 PLA2R1Q13018 1463 aa12.4□□□□□ -0.42
LINC01990-201ENST00000609293 ZNF335Q9H4Z2 1342 aaPredicted RBP12.4□□□□□ -0.42
LINC01990-201ENST00000609293 CASKIN1Q8WXD9 1431 aa12.4□□□□□ -0.42
LINC01990-201ENST00000609293 CDHR5Q9HBB8 845 aa12.4□□□□□ -0.43
LINC01990-201ENST00000609293 ATP7AQ04656 1500 aa12.39□□□□□ -0.43
LINC01990-201ENST00000609293 RNF40O75150 1001 aa12.39□□□□□ -0.43
LINC01990-201ENST00000609293 ZNF777Q9ULD5 760 aaPredicted RBP12.39□□□□□ -0.43
LINC01990-201ENST00000609293 PLXNC1O60486 1568 aa12.39□□□□□ -0.43
LINC01990-201ENST00000609293 INO80Q9ULG1 1556 aaPredicted RBP12.39□□□□□ -0.43
LINC01990-201ENST00000609293 SPAG9O60271 1321 aaKnown RBP12.39□□□□□ -0.43
LINC01990-201ENST00000609293 ADGBQ8N7X0 1667 aa12.38□□□□□ -0.43
LINC01990-201ENST00000609293 POLR1AO95602 1720 aaPredicted RBP12.38□□□□□ -0.43
LINC01990-201ENST00000609293 TCOF1Q13428 1488 aaKnown RBP12.37□□□□□ -0.43
LINC01990-201ENST00000609293 MTRQ99707 1265 aa12.37□□□□□ -0.43
LINC01990-201ENST00000609293 SLF2Q8IX21 1173 aa12.36□□□□□ -0.43
LINC01990-201ENST00000609293 A2MP01023 1474 aa12.36□□□□□ -0.43
LINC01990-201ENST00000609293 C3orf80F5H4A9 247 aa12.35□□□□□ -0.43
LINC01990-201ENST00000609293 PTPRKQ15262 1439 aa12.35□□□□□ -0.43
LINC01990-201ENST00000609293 FYCO1Q9BQS8 1478 aa12.35□□□□□ -0.43
LINC01990-201ENST00000609293 MED1Q15648 1581 aaPredicted RBP12.34□□□□□ -0.43
LINC01990-201ENST00000609293 PLEKHH2Q8IVE3 1493 aa12.34□□□□□ -0.43
LINC01990-201ENST00000609293 TTC13Q8NBP0 860 aa12.34□□□□□ -0.43
LINC01990-201ENST00000609293 GPATCH8Q9UKJ3 1502 aaKnown RBP12.34□□□□□ -0.43
LINC01990-201ENST00000609293 DNMT1P26358 1616 aaKnown RBP12.34□□□□□ -0.43
LINC01990-201ENST00000609293 HNRNPMP52272 730 aaKnown RBP eCLIP12.34□□□□□ -0.43
LINC01990-201ENST00000609293 GGT6Q6P531 493 aa12.33□□□□□ -0.44
LINC01990-201ENST00000609293 PADI6Q6TGC4 694 aa12.33□□□□□ -0.44
LINC01990-201ENST00000609293 ARHGEF1Q92888 912 aaKnown RBP12.33□□□□□ -0.44
LINC01990-201ENST00000609293 A2ML1A8K2U0 1454 aa12.32□□□□□ -0.44
LINC01990-201ENST00000609293 KIAA1107Q9UPP5 1409 aa12.32□□□□□ -0.44
LINC01990-201ENST00000609293 NPDC1Q9NQX5 325 aaPredicted RBP12.31□□□□□ -0.44
LINC01990-201ENST00000609293 CPS1P31327 1500 aa12.31□□□□□ -0.44
LINC01990-201ENST00000609293 APLP1P51693 650 aa12.3□□□□□ -0.44
LINC01990-201ENST00000609293 PRR14Q9BWN1 585 aa12.3□□□□□ -0.44
LINC01990-201ENST00000609293 NEURL4Q96JN8 1562 aa12.29□□□□□ -0.44
LINC01990-201ENST00000609293 GGCXP38435 758 aa12.29□□□□□ -0.44
LINC01990-201ENST00000609293 PIP4K2BP78356 416 aa12.29□□□□□ -0.44
LINC01990-201ENST00000609293 SWT1Q5T5J6 900 aaKnown RBP12.29□□□□□ -0.44
LINC01990-201ENST00000609293 CFDP1Q9UEE9 299 aaPredicted RBP12.29□□□□□ -0.44
LINC01990-201ENST00000609293 CCNB3Q8WWL7 1395 aa12.29□□□□□ -0.44
LINC01990-201ENST00000609293 TOM1O60784 492 aa12.28□□□□□ -0.44
LINC01990-201ENST00000609293 HSPA1LP34931 641 aa12.28□□□□□ -0.44
LINC01990-201ENST00000609293 PPP1R18Q6NYC8 613 aa12.28□□□□□ -0.44
LINC01990-201ENST00000609293 PRKD2Q9BZL6 878 aa12.28□□□□□ -0.44
LINC01990-201ENST00000609293 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.28□□□□□ -0.44
LINC01990-201ENST00000609293 V9GY48 417 aaPredicted RBP12.28□□□□□ -0.44
LINC01990-201ENST00000609293 GFRA3O60609 400 aa12.27□□□□□ -0.44
LINC01990-201ENST00000609293 SHANK2Q9UPX8 1470 aa12.27□□□□□ -0.45
LINC01990-201ENST00000609293 ZNF516Q92618 1163 aa12.26□□□□□ -0.45
LINC01990-201ENST00000609293 EYA1Q99502 592 aa12.25□□□□□ -0.45
LINC01990-201ENST00000609293 MTUS2Q5JR59 1369 aa12.25□□□□□ -0.45
LINC01990-201ENST00000609293 TNRQ92752 1358 aa12.25□□□□□ -0.45
LINC01990-201ENST00000609293 TIAM1Q13009 1591 aa12.25□□□□□ -0.45
LINC01990-201ENST00000609293 KDM5DQ9BY66 1539 aa12.24□□□□□ -0.45
LINC01990-201ENST00000609293 FAM135AQ9P2D6 1515 aa12.24□□□□□ -0.45
LINC01990-201ENST00000609293 VWDEQ8N2E2 1590 aa12.24□□□□□ -0.45
LINC01990-201ENST00000609293 IQGAP1P46940 1657 aa12.23□□□□□ -0.45
LINC01990-201ENST00000609293 PZPP20742 1482 aa12.23□□□□□ -0.45
LINC01990-201ENST00000609293 DEPDC5O75140 1603 aa12.23□□□□□ -0.45
LINC01990-201ENST00000609293 RTEL1-TNFRSF6BF6WH68 1400 aa12.23□□□□□ -0.45
LINC01990-201ENST00000609293 EHBP1L1Q8N3D4 1523 aa12.22□□□□□ -0.45
LINC01990-201ENST00000609293 DHX29Q7Z478 1369 aaKnown RBP12.22□□□□□ -0.45
LINC01990-201ENST00000609293 TMUB1Q9BVT8 246 aa12.21□□□□□ -0.45
LINC01990-201ENST00000609293 UGGT1Q9NYU2 1555 aa12.21□□□□□ -0.45
LINC01990-201ENST00000609293 MBD5Q9P267 1494 aa12.21□□□□□ -0.45
LINC01990-201ENST00000609293 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.21□□□□□ -0.46
LINC01990-201ENST00000609293 NRG2O14511 850 aaPredicted RBP12.21□□□□□ -0.46
LINC01990-201ENST00000609293 COPS2P61201 443 aa12.21□□□□□ -0.46
LINC01990-201ENST00000609293 FBXO31Q5XUX0 539 aaPredicted RBP12.21□□□□□ -0.46
LINC01990-201ENST00000609293 ANKLE2Q86XL3 938 aa12.21□□□□□ -0.46
LINC01990-201ENST00000609293 RBM46Q8TBY0 533 aaKnown RBP12.21□□□□□ -0.46
LINC01990-201ENST00000609293 ZNF644Q9H582 1327 aaPredicted RBP12.2□□□□□ -0.46
LINC01990-201ENST00000609293 NLRP1Q9C000 1473 aa12.2□□□□□ -0.46
LINC01990-201ENST00000609293 RNF17Q9BXT8 1623 aaKnown RBP12.2□□□□□ -0.46
LINC01990-201ENST00000609293 ALKQ9UM73 1620 aa12.2□□□□□ -0.46
LINC01990-201ENST00000609293 STRCP1A6NGW2 1772 aa12.2□□□□□ -0.46
LINC01990-201ENST00000609293 SYNMO15061 1565 aa12.2□□□□□ -0.46
LINC01990-201ENST00000609293 KIF3BO15066 747 aa12.2□□□□□ -0.46
LINC01990-201ENST00000609293 NPHP4O75161 1426 aaPredicted RBP12.2□□□□□ -0.46
LINC01990-201ENST00000609293 DNAJB2P25686 324 aa12.2□□□□□ -0.46
LINC01990-201ENST00000609293 MLLT3P42568 568 aaPredicted RBP12.2□□□□□ -0.46
LINC01990-201ENST00000609293 TSHZ2Q9NRE2 1034 aa12.2□□□□□ -0.46
LINC01990-201ENST00000609293 LCE2BO14633 110 aa12.19□□□□□ -0.46
LINC01990-201ENST00000609293 TRAF7Q6Q0C0 670 aa12.19□□□□□ -0.46
LINC01990-201ENST00000609293 THEMISQ8N1K5 641 aaPredicted RBP12.19□□□□□ -0.46
LINC01990-201ENST00000609293 MED14O60244 1454 aa12.19□□□□□ -0.46
LINC01990-201ENST00000609293 ZPR1O75312 459 aa12.18□□□□□ -0.46
LINC01990-201ENST00000609293 PTGDRQ13258 359 aa12.18□□□□□ -0.46
LINC01990-201ENST00000609293 KCNV2Q8TDN2 545 aa12.18□□□□□ -0.46
LINC01990-201ENST00000609293 PCDHB3Q9Y5E6 796 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms