RNA–Protein interactions for RNA: ENST00000608945.1

ITGB5-213, Transcript of integrin subunit beta 5, humanhuman

TSL 2

Gene ITGB5, Length 267 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-213ENST00000608945 PODNQ7Z5L7 613 aa6.71□□□□□ -1.34
ITGB5-213ENST00000608945 ADGRG1Q9Y653 693 aa6.71□□□□□ -1.34
ITGB5-213ENST00000608945 TLL2Q9Y6L7 1015 aa6.71□□□□□ -1.34
ITGB5-213ENST00000608945 WDR4P57081 412 aaKnown RBP6.7□□□□□ -1.34
ITGB5-213ENST00000608945 VWA5B2Q8N398 1253 aa6.7□□□□□ -1.34
ITGB5-213ENST00000608945 RBM46Q8TBY0 533 aaKnown RBP6.7□□□□□ -1.34
ITGB5-213ENST00000608945 ENAMQ9NRM1 1142 aa6.7□□□□□ -1.34
ITGB5-213ENST00000608945 ADH1CP00326 375 aa6.69□□□□□ -1.34
ITGB5-213ENST00000608945 YBX3P16989 372 aaKnown RBP eCLIP6.69□□□□□ -1.34
ITGB5-213ENST00000608945 SRSF11Q05519 484 aaKnown RBP6.69□□□□□ -1.34
ITGB5-213ENST00000608945 DXOO77932 396 aaKnown RBP6.68□□□□□ -1.34
ITGB5-213ENST00000608945 SH3RF1Q7Z6J0 888 aa6.68□□□□□ -1.34
ITGB5-213ENST00000608945 COL8A1P27658 744 aa6.67□□□□□ -1.34
ITGB5-213ENST00000608945 CCDC155Q8N6L0 562 aa6.67□□□□□ -1.34
ITGB5-213ENST00000608945 ATP6V1AP38606 617 aa6.66□□□□□ -1.34
ITGB5-213ENST00000608945 FAM161AQ3B820 660 aa6.66□□□□□ -1.34
ITGB5-213ENST00000608945 FZD5Q13467 585 aa6.65□□□□□ -1.34
ITGB5-213ENST00000608945 GAS6Q14393 721 aa6.65□□□□□ -1.34
ITGB5-213ENST00000608945 NBPF11Q86T75 865 aa6.65□□□□□ -1.34
ITGB5-213ENST00000608945 CCDC24Q8N4L8 307 aa6.65□□□□□ -1.34
ITGB5-213ENST00000608945 ZFAND3Q9H8U3 227 aa6.65□□□□□ -1.34
ITGB5-213ENST00000608945 CHGAP10645 457 aaKnown RBP6.64□□□□□ -1.35
ITGB5-213ENST00000608945 CDC14CA4D256 554 aa6.63□□□□□ -1.35
ITGB5-213ENST00000608945 GTPBP6O43824 516 aaPredicted RBP6.63□□□□□ -1.35
ITGB5-213ENST00000608945 SV2AQ7L0J3 742 aa6.63□□□□□ -1.35
ITGB5-213ENST00000608945 BMP2P12643 396 aa6.62□□□□□ -1.35
ITGB5-213ENST00000608945 ITGA6P23229 1130 aa6.62□□□□□ -1.35
ITGB5-213ENST00000608945 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.62□□□□□ -1.35
ITGB5-213ENST00000608945 LINC00528Q8N1L1 170 aa6.61□□□□□ -1.35
ITGB5-213ENST00000608945 NEDD1Q8NHV4 660 aa6.61□□□□□ -1.35
ITGB5-213ENST00000608945 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.6□□□□□ -1.35
ITGB5-213ENST00000608945 SLC35F4A4IF30 521 aa6.6□□□□□ -1.35
ITGB5-213ENST00000608945 C1QTNF9BB2RNN3 333 aa6.6□□□□□ -1.35
ITGB5-213ENST00000608945 SNRPNP63162 240 aaKnown RBP6.6□□□□□ -1.35
ITGB5-213ENST00000608945 SH3BP2P78314 561 aa6.59□□□□□ -1.35
ITGB5-213ENST00000608945 DOC2BQ14184 412 aa6.59□□□□□ -1.35
ITGB5-213ENST00000608945 ZIC2O95409 532 aaPredicted RBP6.58□□□□□ -1.36
ITGB5-213ENST00000608945 LCE4AQ5TA78 99 aa6.58□□□□□ -1.36
ITGB5-213ENST00000608945 PTCRAQ6ISU1 281 aaPredicted RBP6.58□□□□□ -1.36
ITGB5-213ENST00000608945 CD163Q86VB7 1156 aa6.58□□□□□ -1.36
ITGB5-213ENST00000608945 ITPKCQ96DU7 683 aa6.58□□□□□ -1.36
ITGB5-213ENST00000608945 BCRP11274 1271 aa6.57□□□□□ -1.36
ITGB5-213ENST00000608945 MCTP1Q6DN14 999 aa6.57□□□□□ -1.36
ITGB5-213ENST00000608945 ALYREFQ86V81 257 aaKnown RBP6.57□□□□□ -1.36
ITGB5-213ENST00000608945 MPNDQ8N594 471 aa6.56□□□□□ -1.36
ITGB5-213ENST00000608945 MEIOBQ8N635 442 aa6.56□□□□□ -1.36
ITGB5-213ENST00000608945 CHRNA4P43681 627 aa6.54□□□□□ -1.36
ITGB5-213ENST00000608945 RSPH4AQ5TD94 716 aa6.54□□□□□ -1.36
ITGB5-213ENST00000608945 FMNL2Q96PY5 1086 aa6.54□□□□□ -1.36
ITGB5-213ENST00000608945 TTLL8A6PVC2 850 aa6.52□□□□□ -1.37
ITGB5-213ENST00000608945 TXKP42681 527 aa6.52□□□□□ -1.37
ITGB5-213ENST00000608945 ACDQ96AP0 544 aa6.52□□□□□ -1.37
ITGB5-213ENST00000608945 PLEKHG3A1L390 1219 aa6.51□□□□□ -1.37
ITGB5-213ENST00000608945 FIGNL2A6NMB9 653 aa6.51□□□□□ -1.37
ITGB5-213ENST00000608945 RSPO4Q2I0M5 234 aaPredicted RBP6.51□□□□□ -1.37
ITGB5-213ENST00000608945 USB1Q9BQ65 265 aaKnown RBP6.51□□□□□ -1.37
ITGB5-213ENST00000608945 UPP2O95045 317 aa6.5□□□□□ -1.37
ITGB5-213ENST00000608945 RDH13Q8NBN7 331 aa6.5□□□□□ -1.37
ITGB5-213ENST00000608945 IGF1RP08069 1367 aa6.49□□□□□ -1.37
ITGB5-213ENST00000608945 NR3C2P08235 984 aa6.49□□□□□ -1.37
ITGB5-213ENST00000608945 GCGRP47871 477 aa6.49□□□□□ -1.37
ITGB5-213ENST00000608945 PTGDRQ13258 359 aa6.49□□□□□ -1.37
ITGB5-213ENST00000608945 PXYLP1Q8TE99 480 aa6.49□□□□□ -1.37
ITGB5-213ENST00000608945 SUV39H2Q9H5I1 410 aa6.48□□□□□ -1.37
ITGB5-213ENST00000608945 MBIPQ9NS73 344 aa6.47□□□□□ -1.37
ITGB5-213ENST00000608945 LRP8Q14114 963 aa6.46□□□□□ -1.38
ITGB5-213ENST00000608945 GRIN2CQ14957 1233 aa6.46□□□□□ -1.38
ITGB5-213ENST00000608945 Q3C1V9 767 aa6.46□□□□□ -1.38
ITGB5-213ENST00000608945 NKAPLQ5M9Q1 402 aa6.46□□□□□ -1.38
ITGB5-213ENST00000608945 PAX4O43316 350 aa6.45□□□□□ -1.38
ITGB5-213ENST00000608945 CUEDC1Q9NWM3 386 aaPredicted RBP6.45□□□□□ -1.38
ITGB5-213ENST00000608945 MKL2Q9ULH7 1088 aa6.45□□□□□ -1.38
ITGB5-213ENST00000608945 SENP3-EIF4A1A0A087X0R7 540 aa6.44□□□□□ -1.38
ITGB5-213ENST00000608945 LINC01559Q495D7 138 aa6.44□□□□□ -1.38
ITGB5-213ENST00000608945 LRRC4BQ9NT99 713 aa6.44□□□□□ -1.38
ITGB5-213ENST00000608945 HYAL3O43820 417 aaPredicted RBP6.43□□□□□ -1.38
ITGB5-213ENST00000608945 VARSP26640 1264 aaKnown RBP6.43□□□□□ -1.38
ITGB5-213ENST00000608945 ARIH1Q9Y4X5 557 aaPredicted RBP6.43□□□□□ -1.38
ITGB5-213ENST00000608945 COL17A1Q9UMD9 1497 aaPredicted RBP6.41□□□□□ -1.38
ITGB5-213ENST00000608945 OIP5O43482 229 aa6.41□□□□□ -1.38
ITGB5-213ENST00000608945 TSEN34Q9BSV6 310 aaKnown RBP6.41□□□□□ -1.38
ITGB5-213ENST00000608945 DDX11L8A8MPP1 907 aa6.4□□□□□ -1.38
ITGB5-213ENST00000608945 SHISA8B8ZZ34 492 aa6.4□□□□□ -1.38
ITGB5-213ENST00000608945 DYRK3O43781 588 aa6.4□□□□□ -1.38
ITGB5-213ENST00000608945 JUNDP17535 347 aa6.4□□□□□ -1.38
ITGB5-213ENST00000608945 CDK15Q96Q40 435 aa6.4□□□□□ -1.38
ITGB5-213ENST00000608945 NUDT12Q9BQG2 462 aa6.4□□□□□ -1.38
ITGB5-213ENST00000608945 HOXB4P17483 251 aaPredicted RBP6.39□□□□□ -1.39
ITGB5-213ENST00000608945 LINC00114Q6XXX2 140 aa6.38□□□□□ -1.39
ITGB5-213ENST00000608945 BAP1Q92560 729 aa6.38□□□□□ -1.39
ITGB5-213ENST00000608945 PRSS36Q5K4E3 855 aa6.37□□□□□ -1.39
ITGB5-213ENST00000608945 CCER1Q8TC90 406 aaPredicted RBP6.37□□□□□ -1.39
ITGB5-213ENST00000608945 GPR25O00155 361 aa6.36□□□□□ -1.39
ITGB5-213ENST00000608945 JAG1P78504 1218 aa6.36□□□□□ -1.39
ITGB5-213ENST00000608945 LCE5AQ5TCM9 118 aa6.36□□□□□ -1.39
ITGB5-213ENST00000608945 METTL3Q86U44 580 aaKnown RBP6.36□□□□□ -1.39
ITGB5-213ENST00000608945 ZNF511Q8NB15 262 aa6.36□□□□□ -1.39
ITGB5-213ENST00000608945 DAXXQ9UER7 740 aaPredicted RBP6.36□□□□□ -1.39
ITGB5-213ENST00000608945 GRM5P41594 1212 aa6.35□□□□□ -1.39
ITGB5-213ENST00000608945 SPINT1O43278 529 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms