RNA–Protein interactions for RNA: ENST00000608535.1

SMIM8-208, Transcript of small integral membrane protein 8, humanhuman

Gene SMIM8, Length 3,915 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM8-208ENST00000608535 DDRGK1Q96HY6 314 aa11.75□□□□□ -0.53
SMIM8-208ENST00000608535 ZHX3Q9H4I2 956 aa11.75□□□□□ -0.53
SMIM8-208ENST00000608535 C4orf46Q504U0 113 aa11.75□□□□□ -0.53
SMIM8-208ENST00000608535 HMGXB3Q12766 1538 aa11.74□□□□□ -0.53
SMIM8-208ENST00000608535 WDR75Q8IWA0 830 aaKnown RBP11.74□□□□□ -0.53
SMIM8-208ENST00000608535 RSPH9Q9H1X1 276 aaPredicted RBP11.74□□□□□ -0.53
SMIM8-208ENST00000608535 TDO2P48775 406 aa11.74□□□□□ -0.53
SMIM8-208ENST00000608535 SAFB2Q14151 953 aaKnown RBP eCLIP11.74□□□□□ -0.53
SMIM8-208ENST00000608535 FMNL3Q8IVF7 1028 aa11.74□□□□□ -0.53
SMIM8-208ENST00000608535 CCDC34Q96HJ3 373 aa11.74□□□□□ -0.53
SMIM8-208ENST00000608535 NAP1L4Q99733 375 aaKnown RBP11.74□□□□□ -0.53
SMIM8-208ENST00000608535 MTA1Q13330 715 aa11.73□□□□□ -0.53
SMIM8-208ENST00000608535 GPIHBP1Q8IV16 184 aa11.73□□□□□ -0.53
SMIM8-208ENST00000608535 FEZ2Q9UHY8 353 aaPredicted RBP11.73□□□□□ -0.53
SMIM8-208ENST00000608535 S100BP04271 92 aaPredicted RBP11.73□□□□□ -0.53
SMIM8-208ENST00000608535 MKRN1Q9UHC7 482 aaKnown RBP11.72□□□□□ -0.53
SMIM8-208ENST00000608535 ERCC6Q03468 1493 aa11.72□□□□□ -0.53
SMIM8-208ENST00000608535 ERCC5P28715 1186 aaPredicted RBP11.72□□□□□ -0.53
SMIM8-208ENST00000608535 SMAPO00193 183 aa11.72□□□□□ -0.53
SMIM8-208ENST00000608535 TBX4P57082 545 aa11.71□□□□□ -0.53
SMIM8-208ENST00000608535 ANP32AP39687 249 aaKnown RBP11.71□□□□□ -0.53
SMIM8-208ENST00000608535 RNF217Q8TC41 542 aa11.71□□□□□ -0.54
SMIM8-208ENST00000608535 JDP2Q8WYK2 163 aa11.71□□□□□ -0.54
SMIM8-208ENST00000608535 EVA1CP58658 441 aa11.7□□□□□ -0.54
SMIM8-208ENST00000608535 STK11IPQ8N1F8 1099 aa11.7□□□□□ -0.54
SMIM8-208ENST00000608535 EIF3JO75822 258 aaKnown RBP11.7□□□□□ -0.54
SMIM8-208ENST00000608535 HDGFL1Q5TGJ6 251 aa11.7□□□□□ -0.54
SMIM8-208ENST00000608535 ZHX1Q9UKY1 873 aaPredicted RBP11.7□□□□□ -0.54
SMIM8-208ENST00000608535 RRM1P23921 792 aa11.69□□□□□ -0.54
SMIM8-208ENST00000608535 NBPF10Q6P3W6 841 aaKnown RBP11.69□□□□□ -0.54
SMIM8-208ENST00000608535 ZSWIM4Q9H7M6 989 aa11.69□□□□□ -0.54
SMIM8-208ENST00000608535 SWAP70Q9UH65 585 aa11.69□□□□□ -0.54
SMIM8-208ENST00000608535 RSF1Q96T23 1441 aaPredicted RBP11.69□□□□□ -0.54
SMIM8-208ENST00000608535 CACTIN-AS1Q8N1I8 211 aa11.69□□□□□ -0.54
SMIM8-208ENST00000608535 CFAP69A5D8W1 941 aa11.69□□□□□ -0.54
SMIM8-208ENST00000608535 TAGLNQ01995 201 aaKnown RBP11.69□□□□□ -0.54
SMIM8-208ENST00000608535 CXorf56Q9H5V9 222 aa11.69□□□□□ -0.54
SMIM8-208ENST00000608535 CCDC144BQ3MJ40 725 aa11.68□□□□□ -0.54
SMIM8-208ENST00000608535 U2AF1L5P0DN76 240 aaPredicted RBP11.68□□□□□ -0.54
SMIM8-208ENST00000608535 U2AF1Q01081 240 aaKnown RBP eCLIP11.68□□□□□ -0.54
SMIM8-208ENST00000608535 ANKRD23Q86SG2 305 aa11.68□□□□□ -0.54
SMIM8-208ENST00000608535 ENOX1Q8TC92 643 aaKnown RBP11.68□□□□□ -0.54
SMIM8-208ENST00000608535 KCNB2Q92953 911 aa11.68□□□□□ -0.54
SMIM8-208ENST00000608535 INO80BQ9C086 356 aaPredicted RBP11.68□□□□□ -0.54
SMIM8-208ENST00000608535 SDE2Q6IQ49 451 aa11.67□□□□□ -0.54
SMIM8-208ENST00000608535 DDX27Q96GQ7 796 aaKnown RBP11.67□□□□□ -0.54
SMIM8-208ENST00000608535 CDC5LQ99459 802 aaKnown RBP11.67□□□□□ -0.54
SMIM8-208ENST00000608535 CGNQ9P2M7 1197 aaKnown RBP11.67□□□□□ -0.54
SMIM8-208ENST00000608535 POU5F1Q01860 360 aaKnown RBP11.67□□□□□ -0.54
SMIM8-208ENST00000608535 MIER1Q8N108 512 aa11.67□□□□□ -0.54
SMIM8-208ENST00000608535 PCMTD1Q96MG8 357 aaPredicted RBP11.67□□□□□ -0.54
SMIM8-208ENST00000608535 C8orf37Q96NL8 207 aa11.67□□□□□ -0.54
SMIM8-208ENST00000608535 HDAC9Q9UKV0 1011 aa11.67□□□□□ -0.54
SMIM8-208ENST00000608535 EP400NLQ6ZTU2 488 aa11.67□□□□□ -0.54
SMIM8-208ENST00000608535 PNISRQ8TF01 805 aaKnown RBP11.67□□□□□ -0.54
SMIM8-208ENST00000608535 CHMP4CQ96CF2 233 aa11.67□□□□□ -0.54
SMIM8-208ENST00000608535 SUDS3Q9H7L9 328 aaPredicted RBP11.67□□□□□ -0.54
SMIM8-208ENST00000608535 CHMP3Q9Y3E7 222 aa11.67□□□□□ -0.54
SMIM8-208ENST00000608535 U3KPZ7 1027 aaPredicted RBP11.67□□□□□ -0.54
SMIM8-208ENST00000608535 PEG3Q9GZU2 1588 aa11.66□□□□□ -0.54
SMIM8-208ENST00000608535 RSPH1Q8WYR4 309 aa11.66□□□□□ -0.54
SMIM8-208ENST00000608535 CFAP53Q96M91 514 aa11.66□□□□□ -0.54
SMIM8-208ENST00000608535 TTLL12Q14166 644 aaPredicted RBP11.66□□□□□ -0.54
SMIM8-208ENST00000608535 PROM2Q8N271 834 aa11.65□□□□□ -0.54
SMIM8-208ENST00000608535 SATB1Q01826 763 aa11.65□□□□□ -0.54
SMIM8-208ENST00000608535 E2F5Q15329 346 aa11.65□□□□□ -0.54
SMIM8-208ENST00000608535 IRF2BPLQ9H1B7 796 aa11.65□□□□□ -0.54
SMIM8-208ENST00000608535 DMGDHQ9UI17 866 aaKnown RBP11.65□□□□□ -0.54
SMIM8-208ENST00000608535 RBM28Q9NW13 759 aaKnown RBP11.65□□□□□ -0.55
SMIM8-208ENST00000608535 TTC30AQ86WT1 665 aa11.64□□□□□ -0.55
SMIM8-208ENST00000608535 TOMM20Q15388 145 aa11.64□□□□□ -0.55
SMIM8-208ENST00000608535 ZKSCAN8Q15776 578 aaPredicted RBP11.64□□□□□ -0.55
SMIM8-208ENST00000608535 CCDC92Q53HC0 331 aaPredicted RBP11.64□□□□□ -0.55
SMIM8-208ENST00000608535 CCDC70Q6NSX1 233 aa11.64□□□□□ -0.55
SMIM8-208ENST00000608535 NLGN1Q8N2Q7 840 aa11.64□□□□□ -0.55
SMIM8-208ENST00000608535 NOP58Q9Y2X3 529 aaKnown RBP11.64□□□□□ -0.55
SMIM8-208ENST00000608535 GOLGA6L22H0YM25 854 aa11.64□□□□□ -0.55
SMIM8-208ENST00000608535 PRR29P0C7W0 189 aa11.64□□□□□ -0.55
SMIM8-208ENST00000608535 CD53P19397 219 aa11.64□□□□□ -0.55
SMIM8-208ENST00000608535 TCEAL1Q15170 157 aa11.64□□□□□ -0.55
SMIM8-208ENST00000608535 FILIP1Q7Z7B0 1213 aa11.64□□□□□ -0.55
SMIM8-208ENST00000608535 COG6Q9Y2V7 657 aa11.64□□□□□ -0.55
SMIM8-208ENST00000608535 TBC1D2Q9BYX2 928 aa11.63□□□□□ -0.55
SMIM8-208ENST00000608535 COL4A3BPQ9Y5P4 624 aa11.63□□□□□ -0.55
SMIM8-208ENST00000608535 CCDC47Q96A33 483 aaKnown RBP11.63□□□□□ -0.55
SMIM8-208ENST00000608535 WIZO95785 1651 aa11.63□□□□□ -0.55
SMIM8-208ENST00000608535 GLMNQ92990 594 aa11.63□□□□□ -0.55
SMIM8-208ENST00000608535 PIF1Q9H611 641 aa11.63□□□□□ -0.55
SMIM8-208ENST00000608535 RAI14Q9P0K7 980 aa11.63□□□□□ -0.55
SMIM8-208ENST00000608535 VRTNQ9H8Y1 702 aa11.62□□□□□ -0.55
SMIM8-208ENST00000608535 CEP126Q9P2H0 1117 aa11.62□□□□□ -0.55
SMIM8-208ENST00000608535 ANAPC4Q9UJX5 808 aa11.62□□□□□ -0.55
SMIM8-208ENST00000608535 POM121CA8CG34 1229 aa11.62□□□□□ -0.55
SMIM8-208ENST00000608535 PSMD2Q13200 908 aa11.62□□□□□ -0.55
SMIM8-208ENST00000608535 SMC3Q9UQE7 1217 aa11.62□□□□□ -0.55
SMIM8-208ENST00000608535 PPP4R3BQ5MIZ7 849 aa11.62□□□□□ -0.55
SMIM8-208ENST00000608535 PBXIP1Q96AQ6 731 aa11.62□□□□□ -0.55
SMIM8-208ENST00000608535 SPC25Q9HBM1 224 aa11.62□□□□□ -0.55
SMIM8-208ENST00000608535 NUTM2GQ5VZR2 741 aa11.61□□□□□ -0.55
SMIM8-208ENST00000608535 PPP4R4Q6NUP7 873 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms