RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 NBPF1Q3BBV0 1214 aa15.57■□□□□ 0.08
CTCFL-218ENST00000608440 KIAA2012Q0VF49 1180 aa15.56■□□□□ 0.08
CTCFL-218ENST00000608440 BCL2L12Q9HB09 334 aa15.56■□□□□ 0.08
CTCFL-218ENST00000608440 KIF3AQ9Y496 699 aa15.56■□□□□ 0.08
CTCFL-218ENST00000608440 BLMP54132 1417 aaPredicted RBP15.56■□□□□ 0.08
CTCFL-218ENST00000608440 MAGI2Q86UL8 1455 aa15.56■□□□□ 0.08
CTCFL-218ENST00000608440 CHRM1P11229 460 aaPredicted RBP15.56■□□□□ 0.08
CTCFL-218ENST00000608440 PTMSP20962 102 aa15.56■□□□□ 0.08
CTCFL-218ENST00000608440 ZSCAN23Q3MJ62 389 aa15.56■□□□□ 0.08
CTCFL-218ENST00000608440 CHMP4CQ96CF2 233 aa15.56■□□□□ 0.08
CTCFL-218ENST00000608440 DNAJC2Q99543 621 aaKnown RBP15.56■□□□□ 0.08
CTCFL-218ENST00000608440 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.55■□□□□ 0.08
CTCFL-218ENST00000608440 PARD3Q8TEW0 1356 aa15.55■□□□□ 0.08
CTCFL-218ENST00000608440 IQGAP3Q86VI3 1631 aa15.55■□□□□ 0.08
CTCFL-218ENST00000608440 ZMYM4Q5VZL5 1548 aa15.55■□□□□ 0.08
CTCFL-218ENST00000608440 KIF3BO15066 747 aa15.54■□□□□ 0.08
CTCFL-218ENST00000608440 HECW2Q9P2P5 1572 aa15.54■□□□□ 0.08
CTCFL-218ENST00000608440 TSPOAP1O95153 1857 aa15.54■□□□□ 0.08
CTCFL-218ENST00000608440 TRIM6-TRIM34B2RNG4 842 aa15.53■□□□□ 0.08
CTCFL-218ENST00000608440 ZNF445P59923 1031 aa15.53■□□□□ 0.08
CTCFL-218ENST00000608440 C17orf53Q8N3J3 647 aaPredicted RBP15.53■□□□□ 0.08
CTCFL-218ENST00000608440 TRIM34Q9BYJ4 488 aa15.53■□□□□ 0.08
CTCFL-218ENST00000608440 SPINK5Q9NQ38 1064 aaPredicted RBP15.53■□□□□ 0.08
CTCFL-218ENST00000608440 SMC5Q8IY18 1101 aa15.53■□□□□ 0.08
CTCFL-218ENST00000608440 RNF214Q8ND24 703 aa15.53■□□□□ 0.08
CTCFL-218ENST00000608440 TRERF1Q96PN7 1200 aa15.53■□□□□ 0.08
CTCFL-218ENST00000608440 MCTP1Q6DN14 999 aa15.52■□□□□ 0.08
CTCFL-218ENST00000608440 PRIMPOLQ96LW4 560 aa15.52■□□□□ 0.08
CTCFL-218ENST00000608440 CIZ1Q9ULV3 898 aaPredicted RBP15.52■□□□□ 0.08
CTCFL-218ENST00000608440 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.52■□□□□ 0.089e-7■■□□□ 11.8
CTCFL-218ENST00000608440 CGNL1Q0VF96 1302 aa15.52■□□□□ 0.08
CTCFL-218ENST00000608440 MLH3Q9UHC1 1453 aa15.52■□□□□ 0.08
CTCFL-218ENST00000608440 HMGN5P82970 282 aaKnown RBP15.52■□□□□ 0.07
CTCFL-218ENST00000608440 RBM27Q9P2N5 1060 aaKnown RBP15.52■□□□□ 0.07
CTCFL-218ENST00000608440 PCDHB15Q9Y5E8 787 aa15.52■□□□□ 0.07
CTCFL-218ENST00000608440 A2MP01023 1474 aa15.51■□□□□ 0.07
CTCFL-218ENST00000608440 SLFN5Q08AF3 891 aa15.51■□□□□ 0.07
CTCFL-218ENST00000608440 IBTKQ9P2D0 1353 aaPredicted RBP15.51■□□□□ 0.07
CTCFL-218ENST00000608440 BAG4O95429 457 aaKnown RBP15.51■□□□□ 0.07
CTCFL-218ENST00000608440 NCOA3Q9Y6Q9 1424 aa15.5■□□□□ 0.07
CTCFL-218ENST00000608440 ABCA6Q8N139 1617 aa15.5■□□□□ 0.07
CTCFL-218ENST00000608440 GTF2F1P35269 517 aaKnown RBP eCLIP15.5■□□□□ 0.07
CTCFL-218ENST00000608440 RBM25P49756 843 aaKnown RBP15.49■□□□□ 0.07
CTCFL-218ENST00000608440 PPRC1Q5VV67 1664 aaKnown RBP15.49■□□□□ 0.07
CTCFL-218ENST00000608440 DEPDC5O75140 1603 aa15.49■□□□□ 0.07
CTCFL-218ENST00000608440 FRMPD1Q5SYB0 1578 aa15.49■□□□□ 0.07
CTCFL-218ENST00000608440 TIGD1Q96MW7 591 aa15.49■□□□□ 0.07
CTCFL-218ENST00000608440 RICTORQ6R327 1708 aa15.49■□□□□ 0.07
CTCFL-218ENST00000608440 CAPN2P17655 700 aa15.48■□□□□ 0.07
CTCFL-218ENST00000608440 WDR43Q15061 677 aaKnown RBP eCLIP15.48■□□□□ 0.07
CTCFL-218ENST00000608440 ERICH4A6NGS2 130 aa15.48■□□□□ 0.07
CTCFL-218ENST00000608440 CCDC146Q8IYE0 955 aa15.48■□□□□ 0.07
CTCFL-218ENST00000608440 PMFBP1Q8TBY8 1022 aa15.48■□□□□ 0.07
CTCFL-218ENST00000608440 PLA2R1Q13018 1463 aa15.47■□□□□ 0.07
CTCFL-218ENST00000608440 EIF2AK4Q9P2K8 1649 aaKnown RBP15.47■□□□□ 0.07
CTCFL-218ENST00000608440 VGFO15240 615 aaPredicted RBP15.47■□□□□ 0.07
CTCFL-218ENST00000608440 CD2BP2O95400 341 aaKnown RBP15.47■□□□□ 0.07
CTCFL-218ENST00000608440 NGEFQ8N5V2 710 aa15.47■□□□□ 0.07
CTCFL-218ENST00000608440 KDM2AQ9Y2K7 1162 aa15.47■□□□□ 0.07
CTCFL-218ENST00000608440 CCDC144AA2RUR9 1427 aa15.47■□□□□ 0.07
CTCFL-218ENST00000608440 YEATS2Q9ULM3 1422 aa15.47■□□□□ 0.07
CTCFL-218ENST00000608440 NOLC1Q14978 699 aaKnown RBP eCLIP15.47■□□□□ 0.07
CTCFL-218ENST00000608440 KANK1Q14678 1352 aa15.47■□□□□ 0.07
CTCFL-218ENST00000608440 MROH1Q8NDA8 1641 aa15.47■□□□□ 0.07
CTCFL-218ENST00000608440 CCDC66A2RUB6 948 aa15.46■□□□□ 0.07
CTCFL-218ENST00000608440 SLC20A2Q08357 652 aa15.46■□□□□ 0.07
CTCFL-218ENST00000608440 KIF13AQ9H1H9 1805 aa15.46■□□□□ 0.07
CTCFL-218ENST00000608440 PRDM15P57071 1507 aaPredicted RBP15.46■□□□□ 0.07
CTCFL-218ENST00000608440 SYCE3A1L190 88 aa15.45■□□□□ 0.06
CTCFL-218ENST00000608440 PER1O15534 1290 aaPredicted RBP15.45■□□□□ 0.06
CTCFL-218ENST00000608440 SLFN14P0C7P3 912 aa15.45■□□□□ 0.06
CTCFL-218ENST00000608440 DIP2CQ9Y2E4 1556 aa15.45■□□□□ 0.06
CTCFL-218ENST00000608440 ZNF521Q96K83 1311 aa15.45■□□□□ 0.06
CTCFL-218ENST00000608440 PDE3AQ14432 1141 aa15.45■□□□□ 0.06
CTCFL-218ENST00000608440 SNX21Q969T3 373 aa15.45■□□□□ 0.06
CTCFL-218ENST00000608440 TNNQ9UQP3 1299 aa15.45■□□□□ 0.06
CTCFL-218ENST00000608440 RNF216Q9NWF9 866 aaPredicted RBP15.44■□□□□ 0.06
CTCFL-218ENST00000608440 OGFRQ9NZT2 677 aa15.44■□□□□ 0.06
CTCFL-218ENST00000608440 GGT6Q6P531 493 aa15.43■□□□□ 0.06
CTCFL-218ENST00000608440 VWDEQ8N2E2 1590 aa15.43■□□□□ 0.06
CTCFL-218ENST00000608440 GAS2L2Q8NHY3 880 aa15.43■□□□□ 0.06
CTCFL-218ENST00000608440 TTC12Q9H892 705 aaPredicted RBP15.43■□□□□ 0.06
CTCFL-218ENST00000608440 RBM42Q9BTD8 480 aaKnown RBP15.43■□□□□ 0.06
CTCFL-218ENST00000608440 E9PCH4 1651 aa15.43■□□□□ 0.06
CTCFL-218ENST00000608440 PRPF40AO75400 957 aaKnown RBP15.42■□□□□ 0.06
CTCFL-218ENST00000608440 PIBF1Q8WXW3 757 aa15.42■□□□□ 0.06
CTCFL-218ENST00000608440 LMBRD1Q9NUN5 540 aa15.42■□□□□ 0.06
CTCFL-218ENST00000608440 RIOK3O14730 519 aaKnown RBP15.42■□□□□ 0.06
CTCFL-218ENST00000608440 GABPB1Q06547 395 aaPredicted RBP15.42■□□□□ 0.06
CTCFL-218ENST00000608440 FEZ1Q99689 392 aa15.42■□□□□ 0.06
CTCFL-218ENST00000608440 SLC52A1Q9NWF4 448 aa15.42■□□□□ 0.06
CTCFL-218ENST00000608440 RWDD1Q9H446 243 aaPredicted RBP15.41■□□□□ 0.06
CTCFL-218ENST00000608440 TET3O43151 1660 aa15.41■□□□□ 0.06
CTCFL-218ENST00000608440 RNF17Q9BXT8 1623 aaKnown RBP15.41■□□□□ 0.06
CTCFL-218ENST00000608440 RGL3Q3MIN7 710 aa15.4■□□□□ 0.06
CTCFL-218ENST00000608440 ANKRD7Q92527 254 aa15.4■□□□□ 0.06
CTCFL-218ENST00000608440 HDAC5Q9UQL6 1122 aa15.4■□□□□ 0.06
CTCFL-218ENST00000608440 DMRT2Q9Y5R5 561 aa15.4■□□□□ 0.06
CTCFL-218ENST00000608440 ATP10AO60312 1499 aa15.4■□□□□ 0.06
CTCFL-218ENST00000608440 NKTRP30414 1462 aaKnown RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms