RNA–Protein interactions for RNA: ENST00000607339.1

UCHL3-205, Transcript of ubiquitin C-terminal hydrolase L3, humanhuman

TSL 2

Gene UCHL3, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UCHL3-205ENST00000607339 FAM174AQ8TBP5 190 aa10.68□□□□□ -0.7
UCHL3-205ENST00000607339 DACH1Q9UI36 760 aa10.68□□□□□ -0.7
UCHL3-205ENST00000607339 NUTM2BA6NNL0 878 aaPredicted RBP10.67□□□□□ -0.7
UCHL3-205ENST00000607339 NUTM2EB1AL46 878 aaPredicted RBP10.67□□□□□ -0.7
UCHL3-205ENST00000607339 NUTM2DQ5VT03 806 aaPredicted RBP10.67□□□□□ -0.7
UCHL3-205ENST00000607339 NUTM2AQ8IVF1 878 aaPredicted RBP10.67□□□□□ -0.7
UCHL3-205ENST00000607339 BAP1Q92560 729 aa10.67□□□□□ -0.7
UCHL3-205ENST00000607339 LINC01559Q495D7 138 aa10.65□□□□□ -0.7
UCHL3-205ENST00000607339 CFAP99D6REC4 459 aa10.64□□□□□ -0.71
UCHL3-205ENST00000607339 CAPN5O15484 640 aaPredicted RBP10.64□□□□□ -0.71
UCHL3-205ENST00000607339 WFS1O76024 890 aa10.64□□□□□ -0.71
UCHL3-205ENST00000607339 MYSM1Q5VVJ2 828 aa10.64□□□□□ -0.71
UCHL3-205ENST00000607339 PCDHB15Q9Y5E8 787 aa10.64□□□□□ -0.71
UCHL3-205ENST00000607339 NBPF14Q5TI25 921 aa10.63□□□□□ -0.71
UCHL3-205ENST00000607339 F12P00748 615 aaPredicted RBP10.62□□□□□ -0.71
UCHL3-205ENST00000607339 CLK2P49760 499 aaKnown RBP10.62□□□□□ -0.71
UCHL3-205ENST00000607339 BPHLQ86WA6 291 aaPredicted RBP10.62□□□□□ -0.71
UCHL3-205ENST00000607339 SLC24A3Q9HC58 644 aa10.62□□□□□ -0.71
UCHL3-205ENST00000607339 CSPP1Q1MSJ5 1256 aa10.61□□□□□ -0.71
UCHL3-205ENST00000607339 LCE2AQ5TA79 106 aaPredicted RBP10.61□□□□□ -0.71
UCHL3-205ENST00000607339 TSC1Q92574 1164 aa10.61□□□□□ -0.71
UCHL3-205ENST00000607339 AGERQ15109 404 aa10.6□□□□□ -0.71
UCHL3-205ENST00000607339 LILRB3O75022 631 aa10.59□□□□□ -0.71
UCHL3-205ENST00000607339 ADH1CP00326 375 aa10.59□□□□□ -0.71
UCHL3-205ENST00000607339 NNTQ13423 1086 aa10.59□□□□□ -0.71
UCHL3-205ENST00000607339 CABLES1Q8TDN4 633 aa10.59□□□□□ -0.71
UCHL3-205ENST00000607339 SLC16A10Q8TF71 515 aa10.59□□□□□ -0.71
UCHL3-205ENST00000607339 GPKOWQ92917 476 aaPredicted RBP eCLIP10.59□□□□□ -0.71
UCHL3-205ENST00000607339 TLL2Q9Y6L7 1015 aa10.59□□□□□ -0.71
UCHL3-205ENST00000607339 SCARF1Q14162 830 aa10.58□□□□□ -0.72
UCHL3-205ENST00000607339 NPAS3Q8IXF0 933 aa10.58□□□□□ -0.72
UCHL3-205ENST00000607339 BCANQ96GW7 911 aa10.58□□□□□ -0.72
UCHL3-205ENST00000607339 MAP10Q9P2G4 905 aa10.58□□□□□ -0.72
UCHL3-205ENST00000607339 NR5A1Q13285 461 aa10.57□□□□□ -0.72
UCHL3-205ENST00000607339 CDK15Q96Q40 435 aa10.57□□□□□ -0.72
UCHL3-205ENST00000607339 LIMD1Q9UGP4 676 aa10.57□□□□□ -0.72
UCHL3-205ENST00000607339 SNRPBP14678 240 aaKnown RBP10.56□□□□□ -0.72
UCHL3-205ENST00000607339 INSM1Q01101 510 aaPredicted RBP10.56□□□□□ -0.72
UCHL3-205ENST00000607339 DDRGK1Q96HY6 314 aa10.56□□□□□ -0.72
UCHL3-205ENST00000607339 TERTO14746 1132 aaKnown RBP10.55□□□□□ -0.72
UCHL3-205ENST00000607339 NFX1Q12986 1120 aaKnown RBP10.54□□□□□ -0.72
UCHL3-205ENST00000607339 QPCTQ16769 361 aa10.54□□□□□ -0.72
UCHL3-205ENST00000607339 WIPF1O43516 503 aa10.53□□□□□ -0.72
UCHL3-205ENST00000607339 WDR4P57081 412 aaKnown RBP10.53□□□□□ -0.72
UCHL3-205ENST00000607339 PNMA1Q8ND90 353 aa10.53□□□□□ -0.72
UCHL3-205ENST00000607339 STK17AQ9UEE5 414 aa10.52□□□□□ -0.73
UCHL3-205ENST00000607339 MAP4K5Q9Y4K4 846 aa10.52□□□□□ -0.73
UCHL3-205ENST00000607339 UPP2O95045 317 aa10.51□□□□□ -0.73
UCHL3-205ENST00000607339 BMP1P13497 986 aa10.51□□□□□ -0.73
UCHL3-205ENST00000607339 ARID5BQ14865 1188 aa10.51□□□□□ -0.73
UCHL3-205ENST00000607339 TRIM46Q7Z4K8 759 aa10.51□□□□□ -0.73
UCHL3-205ENST00000607339 FOXJ1Q92949 421 aa10.51□□□□□ -0.73
UCHL3-205ENST00000607339 NXF1Q9UBU9 619 aaKnown RBP10.51□□□□□ -0.73
UCHL3-205ENST00000607339 ZC3H4Q9UPT8 1303 aaKnown RBP10.51□□□□□ -0.73
UCHL3-205ENST00000607339 PER1O15534 1290 aaPredicted RBP10.5□□□□□ -0.73
UCHL3-205ENST00000607339 SKIV2LQ15477 1246 aaKnown RBP10.5□□□□□ -0.73
UCHL3-205ENST00000607339 MRPL14Q6P1L8 145 aaKnown RBP10.5□□□□□ -0.73
UCHL3-205ENST00000607339 CDV3Q9UKY7 258 aaKnown RBP10.5□□□□□ -0.73
UCHL3-205ENST00000607339 TIMP2P16035 220 aa10.49□□□□□ -0.73
UCHL3-205ENST00000607339 SH3D19Q5HYK7 790 aa10.49□□□□□ -0.73
UCHL3-205ENST00000607339 TRMT44Q8IYL2 757 aaKnown RBP10.49□□□□□ -0.73
UCHL3-205ENST00000607339 C1QTNF2Q9BXJ5 285 aa10.49□□□□□ -0.73
UCHL3-205ENST00000607339 POLR3EQ9NVU0 708 aa10.48□□□□□ -0.73
UCHL3-205ENST00000607339 SH3RF1Q7Z6J0 888 aa10.47□□□□□ -0.73
UCHL3-205ENST00000607339 IRF7Q92985 503 aa10.47□□□□□ -0.73
UCHL3-205ENST00000607339 ATP1B4Q9UN42 357 aaPredicted RBP10.47□□□□□ -0.73
UCHL3-205ENST00000607339 FAM181BA6NEQ2 426 aa10.46□□□□□ -0.73
UCHL3-205ENST00000607339 ZIC2O95409 532 aaPredicted RBP10.46□□□□□ -0.73
UCHL3-205ENST00000607339 RTL5Q5HYW3 569 aaPredicted RBP10.46□□□□□ -0.73
UCHL3-205ENST00000607339 VASH1Q7L8A9 365 aaPredicted RBP10.46□□□□□ -0.73
UCHL3-205ENST00000607339 SH3BP5LQ7L8J4 393 aa10.46□□□□□ -0.73
UCHL3-205ENST00000607339 ZFP42Q96MM3 310 aa10.46□□□□□ -0.73
UCHL3-205ENST00000607339 TRIM52Q96A61 297 aa10.45□□□□□ -0.74
UCHL3-205ENST00000607339 KDM4CQ9H3R0 1056 aa10.45□□□□□ -0.74
UCHL3-205ENST00000607339 EMILIN1Q9Y6C2 1016 aa10.45□□□□□ -0.74
UCHL3-205ENST00000607339 PDXDC2PQ6P474 469 aa10.44□□□□□ -0.74
UCHL3-205ENST00000607339 MAGEB6P1A0A0J9YX57 407 aa10.43□□□□□ -0.74
UCHL3-205ENST00000607339 FSHRP23945 695 aa10.43□□□□□ -0.74
UCHL3-205ENST00000607339 KLF16Q9BXK1 252 aaPredicted RBP10.43□□□□□ -0.74
UCHL3-205ENST00000607339 C4orf48Q5BLP8 95 aa10.42□□□□□ -0.74
UCHL3-205ENST00000607339 PPP2R2DQ66LE6 453 aa10.42□□□□□ -0.74
UCHL3-205ENST00000607339 SLC10A4Q96EP9 437 aa10.42□□□□□ -0.74
UCHL3-205ENST00000607339 PURBQ96QR8 312 aaKnown RBP10.42□□□□□ -0.74
UCHL3-205ENST00000607339 PGPEP1Q9NXJ5 209 aa10.42□□□□□ -0.74
UCHL3-205ENST00000607339 FKBPLQ9UIM3 349 aa10.42□□□□□ -0.74
UCHL3-205ENST00000607339 GPSM3Q9Y4H4 160 aa10.42□□□□□ -0.74
UCHL3-205ENST00000607339 GRM5P41594 1212 aa10.41□□□□□ -0.74
UCHL3-205ENST00000607339 DHX9Q08211 1270 aaKnown RBP10.41□□□□□ -0.74
UCHL3-205ENST00000607339 CCDC116Q8IYX3 515 aa10.41□□□□□ -0.74
UCHL3-205ENST00000607339 ARHGAP9Q9BRR9 750 aa10.41□□□□□ -0.74
UCHL3-205ENST00000607339 MEIOBQ8N635 442 aa10.4□□□□□ -0.74
UCHL3-205ENST00000607339 ITPKCQ96DU7 683 aa10.4□□□□□ -0.74
UCHL3-205ENST00000607339 TSEN34Q9BSV6 310 aaKnown RBP10.4□□□□□ -0.74
UCHL3-205ENST00000607339 H3BM21 787 aa10.39□□□□□ -0.75
UCHL3-205ENST00000607339 MAN1A2O60476 641 aa10.39□□□□□ -0.75
UCHL3-205ENST00000607339 PTK2Q05397 1052 aa10.39□□□□□ -0.75
UCHL3-205ENST00000607339 ZBTB33Q86T24 672 aa10.39□□□□□ -0.75
UCHL3-205ENST00000607339 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.39□□□□□ -0.75
UCHL3-205ENST00000607339 CARD14Q9BXL6 1004 aa10.39□□□□□ -0.75
UCHL3-205ENST00000607339 NR3C2P08235 984 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms