RNA–Protein interactions for RNA: ENST00000606273.3

HLA-F-230, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 579 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-230ENST00000606273 ZNF710Q8N1W2 664 aa19.05■□□□□ 0.64
HLA-F-230ENST00000606273 LRRC59Q96AG4 307 aaKnown RBP19.05■□□□□ 0.64
HLA-F-230ENST00000606273 ZFYVE9O95405 1425 aa19.04■□□□□ 0.64
HLA-F-230ENST00000606273 DIP2AQ14689 1571 aa19.04■□□□□ 0.64
HLA-F-230ENST00000606273 NGLY1Q96IV0 654 aa19.04■□□□□ 0.64
HLA-F-230ENST00000606273 SETD5Q9C0A6 1442 aa19.03■□□□□ 0.64
HLA-F-230ENST00000606273 ADGRB3O60242 1522 aa19.03■□□□□ 0.64
HLA-F-230ENST00000606273 CHD2O14647 1828 aaKnown RBP19.02■□□□□ 0.64
HLA-F-230ENST00000606273 LMTK2Q8IWU2 1503 aa19.02■□□□□ 0.64
HLA-F-230ENST00000606273 ATAD2Q6PL18 1390 aa19.02■□□□□ 0.64
HLA-F-230ENST00000606273 RIMS2Q9UQ26 1411 aa19■□□□□ 0.63
HLA-F-230ENST00000606273 FAM205CA6NFA0 338 aa19■□□□□ 0.63
HLA-F-230ENST00000606273 ABCC5O15440 1437 aa19■□□□□ 0.63
HLA-F-230ENST00000606273 KANK4Q5T7N3 995 aaPredicted RBP18.99■□□□□ 0.63
HLA-F-230ENST00000606273 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.99■□□□□ 0.63
HLA-F-230ENST00000606273 POTEB3A0JP26 581 aa18.98■□□□□ 0.63
HLA-F-230ENST00000606273 POTEBQ6S5H4 581 aa18.98■□□□□ 0.63
HLA-F-230ENST00000606273 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.98■□□□□ 0.63
HLA-F-230ENST00000606273 HS3ST6Q96QI5 342 aa18.98■□□□□ 0.63
HLA-F-230ENST00000606273 AMOTL2Q9Y2J4 779 aa18.98■□□□□ 0.63
HLA-F-230ENST00000606273 SETBP1Q9Y6X0 1596 aa18.98■□□□□ 0.63
HLA-F-230ENST00000606273 PIK3R4Q99570 1358 aa18.97■□□□□ 0.63
HLA-F-230ENST00000606273 HOXB1P14653 301 aaPredicted RBP18.97■□□□□ 0.63
HLA-F-230ENST00000606273 CCDC125Q86Z20 511 aa18.97■□□□□ 0.63
HLA-F-230ENST00000606273 ADAMTS13Q76LX8 1427 aa18.97■□□□□ 0.63
HLA-F-230ENST00000606273 ADAMTS2O95450 1211 aa18.96■□□□□ 0.63
HLA-F-230ENST00000606273 VPS8Q8N3P4 1428 aa18.95■□□□□ 0.62
HLA-F-230ENST00000606273 RIMBP2O15034 1052 aa18.95■□□□□ 0.62
HLA-F-230ENST00000606273 DDX17Q92841 729 aaKnown RBP18.95■□□□□ 0.62
HLA-F-230ENST00000606273 PNPLA6Q8IY17 1366 aa18.94■□□□□ 0.62
HLA-F-230ENST00000606273 USP21Q9UK80 565 aa18.94■□□□□ 0.62
HLA-F-230ENST00000606273 ASXL1Q8IXJ9 1541 aa18.93■□□□□ 0.62
HLA-F-230ENST00000606273 CHIC2Q9UKJ5 165 aa18.92■□□□□ 0.62
HLA-F-230ENST00000606273 TRPC5Q9UL62 973 aaPredicted RBP18.92■□□□□ 0.62
HLA-F-230ENST00000606273 CHGAP10645 457 aaKnown RBP18.91■□□□□ 0.62
HLA-F-230ENST00000606273 HS6ST3Q8IZP7 471 aa18.91■□□□□ 0.62
HLA-F-230ENST00000606273 DCCP43146 1447 aa18.91■□□□□ 0.62
HLA-F-230ENST00000606273 MST1RQ04912 1400 aa18.91■□□□□ 0.62
HLA-F-230ENST00000606273 PTPRUQ92729 1446 aa18.91■□□□□ 0.62
HLA-F-230ENST00000606273 FNBP4Q8N3X1 1017 aaPredicted RBP18.9■□□□□ 0.62
HLA-F-230ENST00000606273 ANKRD30AQ9BXX3 1397 aa18.88■□□□□ 0.61
HLA-F-230ENST00000606273 DAPK1P53355 1430 aa18.88■□□□□ 0.61
HLA-F-230ENST00000606273 RPRD2Q5VT52 1461 aaKnown RBP18.88■□□□□ 0.61
HLA-F-230ENST00000606273 PPP1R37O75864 691 aa18.87■□□□□ 0.61
HLA-F-230ENST00000606273 TMEM131LA2VDJ0 1609 aa18.86■□□□□ 0.61
HLA-F-230ENST00000606273 ZSWIM6Q9HCJ5 1215 aa18.86■□□□□ 0.61
HLA-F-230ENST00000606273 ERBB3P21860 1342 aa18.83■□□□□ 0.61
HLA-F-230ENST00000606273 NHSL1Q5SYE7 1610 aa18.83■□□□□ 0.61
HLA-F-230ENST00000606273 C2orf72A6NCS6 295 aa18.83■□□□□ 0.6
HLA-F-230ENST00000606273 KIF3CO14782 793 aa18.83■□□□□ 0.6
HLA-F-230ENST00000606273 GPR153Q6NV75 609 aa18.82■□□□□ 0.6
HLA-F-230ENST00000606273 ATRNO75882 1429 aa18.82■□□□□ 0.6
HLA-F-230ENST00000606273 TRPM2O94759 1503 aa18.8■□□□□ 0.6
HLA-F-230ENST00000606273 SOS2Q07890 1332 aaPredicted RBP18.8■□□□□ 0.6
HLA-F-230ENST00000606273 KRTAP3-3Q9BYR6 98 aa18.8■□□□□ 0.6
HLA-F-230ENST00000606273 KRTAP3-2Q9BYR7 98 aa18.8■□□□□ 0.6
HLA-F-230ENST00000606273 SPNS2Q8IVW8 549 aa18.79■□□□□ 0.6
HLA-F-230ENST00000606273 CROCC2H7BZ55 1655 aa18.79■□□□□ 0.6
HLA-F-230ENST00000606273 GCC2Q8IWJ2 1684 aa18.79■□□□□ 0.6
HLA-F-230ENST00000606273 MYO5BQ9ULV0 1848 aa18.79■□□□□ 0.6
HLA-F-230ENST00000606273 EP400Q96L91 3159 aa18.79■□□□□ 0.6
HLA-F-230ENST00000606273 PTCH1Q13635 1447 aa18.78■□□□□ 0.6
HLA-F-230ENST00000606273 GJD4Q96KN9 370 aaPredicted RBP18.78■□□□□ 0.6
HLA-F-230ENST00000606273 DEFB132Q7Z7B7 95 aa18.77■□□□□ 0.6
HLA-F-230ENST00000606273 PTPN23Q9H3S7 1636 aa18.76■□□□□ 0.59
HLA-F-230ENST00000606273 ORAI2Q96SN7 254 aa18.76■□□□□ 0.59
HLA-F-230ENST00000606273 BCL9LQ86UU0 1499 aa18.76■□□□□ 0.59
HLA-F-230ENST00000606273 ARSIQ5FYB1 569 aa18.75■□□□□ 0.59
HLA-F-230ENST00000606273 METP08581 1390 aa18.75■□□□□ 0.59
HLA-F-230ENST00000606273 BLMP54132 1417 aaPredicted RBP18.74■□□□□ 0.59
HLA-F-230ENST00000606273 ADGRL3Q9HAR2 1447 aa18.74■□□□□ 0.59
HLA-F-230ENST00000606273 C1orf167Q5SNV9 1468 aa18.74■□□□□ 0.59
HLA-F-230ENST00000606273 ANKRD50Q9ULJ7 1429 aa18.74■□□□□ 0.59
HLA-F-230ENST00000606273 VARS2Q5ST30 1063 aaKnown RBP18.73■□□□□ 0.59
HLA-F-230ENST00000606273 TMC2Q8TDI7 906 aa18.73■□□□□ 0.59
HLA-F-230ENST00000606273 UNC13BO14795 1591 aa18.71■□□□□ 0.59
HLA-F-230ENST00000606273 XRN1Q8IZH2 1706 aaKnown RBP18.71■□□□□ 0.59
HLA-F-230ENST00000606273 KHSRPQ92945 711 aaKnown RBP eCLIP18.7■□□□□ 0.58
HLA-F-230ENST00000606273 MMRN1Q13201 1228 aa18.69■□□□□ 0.58
HLA-F-230ENST00000606273 ADGRL2O95490 1459 aa18.69■□□□□ 0.58
HLA-F-230ENST00000606273 SF3B2Q13435 895 aaKnown RBP18.68■□□□□ 0.58
HLA-F-230ENST00000606273 NKX1-1Q15270 411 aaPredicted RBP18.68■□□□□ 0.58
HLA-F-230ENST00000606273 PSDA5PKW4 1024 aaPredicted RBP18.66■□□□□ 0.58
HLA-F-230ENST00000606273 HRCP23327 699 aa18.66■□□□□ 0.58
HLA-F-230ENST00000606273 LAMC1P11047 1609 aa18.66■□□□□ 0.58
HLA-F-230ENST00000606273 LRP5O75197 1615 aa18.65■□□□□ 0.58
HLA-F-230ENST00000606273 NRXN3Q9Y4C0 1643 aa18.65■□□□□ 0.58
HLA-F-230ENST00000606273 UNC5CLQ8IV45 518 aa18.65■□□□□ 0.58
HLA-F-230ENST00000606273 MYOM2P54296 1465 aa18.65■□□□□ 0.58
HLA-F-230ENST00000606273 ZNF326Q5BKZ1 582 aaKnown RBP18.63■□□□□ 0.57
HLA-F-230ENST00000606273 RALGAPBQ86X10 1494 aa18.61■□□□□ 0.57
HLA-F-230ENST00000606273 SEPT12Q8IYM1 358 aa18.61■□□□□ 0.57
HLA-F-230ENST00000606273 COL22A1Q8NFW1 1626 aaPredicted RBP18.6■□□□□ 0.57
HLA-F-230ENST00000606273 NALCNQ8IZF0 1738 aa18.6■□□□□ 0.57
HLA-F-230ENST00000606273 NPHP3Q7Z494 1330 aa18.59■□□□□ 0.57
HLA-F-230ENST00000606273 ONECUT3O60422 494 aaPredicted RBP18.59■□□□□ 0.57
HLA-F-230ENST00000606273 FAM50AQ14320 339 aaKnown RBP18.59■□□□□ 0.57
HLA-F-230ENST00000606273 ESCO1Q5FWF5 840 aa18.59■□□□□ 0.57
HLA-F-230ENST00000606273 PPARGC1BQ86YN6 1023 aaKnown RBP18.59■□□□□ 0.57
HLA-F-230ENST00000606273 E9PCH4 1651 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms