RNA–Protein interactions for RNA: ENST00000605166.1

HMGB1P51-201, Transcript of high mobility group box 1 pseudogene 51, humanhuman

BASIC

Gene HMGB1P51, Length 638 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P51-201ENST00000605166 CSB-PGBD3P0DP91 1061 aa9.55□□□□□ -0.88
HMGB1P51-201ENST00000605166 FUT2Q10981 343 aa9.55□□□□□ -0.88
HMGB1P51-201ENST00000605166 ZNF516Q92618 1163 aa9.55□□□□□ -0.88
HMGB1P51-201ENST00000605166 BLOC1S3Q6QNY0 202 aa9.54□□□□□ -0.88
HMGB1P51-201ENST00000605166 PALM3A6NDB9 673 aaPredicted RBP9.53□□□□□ -0.88
HMGB1P51-201ENST00000605166 BRD1O95696 1058 aa9.53□□□□□ -0.88
HMGB1P51-201ENST00000605166 ATP6V1AP38606 617 aa9.53□□□□□ -0.88
HMGB1P51-201ENST00000605166 KCNA1Q09470 495 aa9.53□□□□□ -0.88
HMGB1P51-201ENST00000605166 EPS8L1Q8TE68 723 aa9.52□□□□□ -0.89
HMGB1P51-201ENST00000605166 PPP1R18Q6NYC8 613 aa9.51□□□□□ -0.89
HMGB1P51-201ENST00000605166 RGS22Q8NE09 1264 aa9.51□□□□□ -0.89
HMGB1P51-201ENST00000605166 PRR7Q8TB68 274 aa9.51□□□□□ -0.89
HMGB1P51-201ENST00000605166 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.51□□□□□ -0.89
HMGB1P51-201ENST00000605166 MFAP1P55081 439 aaKnown RBP9.5□□□□□ -0.89
HMGB1P51-201ENST00000605166 UCN2Q96RP3 112 aa9.5□□□□□ -0.89
HMGB1P51-201ENST00000605166 LMOD1P29536 600 aaPredicted RBP9.49□□□□□ -0.89
HMGB1P51-201ENST00000605166 NR6A1Q15406 480 aa9.49□□□□□ -0.89
HMGB1P51-201ENST00000605166 PNMA1Q8ND90 353 aa9.49□□□□□ -0.89
HMGB1P51-201ENST00000605166 SEMA3FQ13275 785 aa9.48□□□□□ -0.89
HMGB1P51-201ENST00000605166 DESI1Q6ICB0 168 aa9.48□□□□□ -0.89
HMGB1P51-201ENST00000605166 RETREG3Q86VR2 466 aa9.48□□□□□ -0.89
HMGB1P51-201ENST00000605166 SCUBE3Q8IX30 993 aa9.48□□□□□ -0.89
HMGB1P51-201ENST00000605166 NKX2-3Q8TAU0 364 aa9.48□□□□□ -0.89
HMGB1P51-201ENST00000605166 SYMPKQ92797 1274 aaKnown RBP9.48□□□□□ -0.89
HMGB1P51-201ENST00000605166 TFIP11Q9UBB9 837 aaKnown RBP9.48□□□□□ -0.89
HMGB1P51-201ENST00000605166 ATG7O95352 703 aa9.47□□□□□ -0.89
HMGB1P51-201ENST00000605166 PER1O15534 1290 aaPredicted RBP9.46□□□□□ -0.9
HMGB1P51-201ENST00000605166 EIF4G2P78344 907 aaKnown RBP eCLIP9.46□□□□□ -0.9
HMGB1P51-201ENST00000605166 MAFBQ9Y5Q3 323 aaPredicted RBP9.46□□□□□ -0.9
HMGB1P51-201ENST00000605166 ADH1BP00325 375 aa9.45□□□□□ -0.9
HMGB1P51-201ENST00000605166 Q3C1V9 767 aa9.45□□□□□ -0.9
HMGB1P51-201ENST00000605166 PUS10Q3MIT2 529 aaKnown RBP9.44□□□□□ -0.9
HMGB1P51-201ENST00000605166 MORN1Q5T089 497 aa9.44□□□□□ -0.9
HMGB1P51-201ENST00000605166 IRX2Q9BZI1 471 aaPredicted RBP9.44□□□□□ -0.9
HMGB1P51-201ENST00000605166 MTMR7Q9Y216 660 aa9.44□□□□□ -0.9
HMGB1P51-201ENST00000605166 V9GY48 417 aaPredicted RBP9.44□□□□□ -0.9
HMGB1P51-201ENST00000605166 FMNL1O95466 1100 aaPredicted RBP9.43□□□□□ -0.9
HMGB1P51-201ENST00000605166 SPSB2Q99619 263 aa9.43□□□□□ -0.9
HMGB1P51-201ENST00000605166 SALL2Q9Y467 1007 aaPredicted RBP9.43□□□□□ -0.9
HMGB1P51-201ENST00000605166 TMEM88BA6NKF7 163 aa9.42□□□□□ -0.9
HMGB1P51-201ENST00000605166 ATP9BO43861 1147 aa9.42□□□□□ -0.9
HMGB1P51-201ENST00000605166 NR1H3Q13133 447 aa9.42□□□□□ -0.9
HMGB1P51-201ENST00000605166 LYPD8Q6UX82 237 aa9.42□□□□□ -0.9
HMGB1P51-201ENST00000605166 TBC1D9Q6ZT07 1266 aa9.42□□□□□ -0.9
HMGB1P51-201ENST00000605166 PRKD2Q9BZL6 878 aa9.42□□□□□ -0.9
HMGB1P51-201ENST00000605166 SLC6A16Q9GZN6 736 aa9.42□□□□□ -0.9
HMGB1P51-201ENST00000605166 SLC27A5Q9Y2P5 690 aa9.42□□□□□ -0.9
HMGB1P51-201ENST00000605166 VRTNQ9H8Y1 702 aa9.41□□□□□ -0.9
HMGB1P51-201ENST00000605166 CARNS1A5YM72 827 aa9.4□□□□□ -0.9
HMGB1P51-201ENST00000605166 TLL1O43897 1013 aa9.4□□□□□ -0.9
HMGB1P51-201ENST00000605166 ANKLE1Q8NAG6 615 aa9.4□□□□□ -0.9
HMGB1P51-201ENST00000605166 RNF223E7ERA6 249 aa9.39□□□□□ -0.91
HMGB1P51-201ENST00000605166 LAPTM4AQ15012 233 aa9.39□□□□□ -0.91
HMGB1P51-201ENST00000605166 CDCA8Q53HL2 280 aa9.39□□□□□ -0.91
HMGB1P51-201ENST00000605166 ZBBXA8MT70 800 aa9.38□□□□□ -0.91
HMGB1P51-201ENST00000605166 S1PR4O95977 384 aa9.38□□□□□ -0.91
HMGB1P51-201ENST00000605166 IVNS1ABPQ9Y6Y0 642 aa9.38□□□□□ -0.91
HMGB1P51-201ENST00000605166 ZC3H4Q9UPT8 1303 aaKnown RBP9.37□□□□□ -0.91
HMGB1P51-201ENST00000605166 FBXO45P0C2W1 286 aa9.37□□□□□ -0.91
HMGB1P51-201ENST00000605166 ELOAQ14241 798 aaKnown RBP9.37□□□□□ -0.91
HMGB1P51-201ENST00000605166 NFATC2IPQ8NCF5 419 aa9.37□□□□□ -0.91
HMGB1P51-201ENST00000605166 B4GALNT3Q6L9W6 998 aa9.36□□□□□ -0.91
HMGB1P51-201ENST00000605166 BRICD5Q6PL45 260 aa9.36□□□□□ -0.91
HMGB1P51-201ENST00000605166 USB1Q9BQ65 265 aaKnown RBP9.36□□□□□ -0.91
HMGB1P51-201ENST00000605166 FKBPLQ9UIM3 349 aa9.36□□□□□ -0.91
HMGB1P51-201ENST00000605166 SLC19A1P41440 591 aa9.35□□□□□ -0.91
HMGB1P51-201ENST00000605166 KANK4Q5T7N3 995 aaPredicted RBP9.35□□□□□ -0.91
HMGB1P51-201ENST00000605166 FOXD4L5Q5VV16 416 aaPredicted RBP9.35□□□□□ -0.91
HMGB1P51-201ENST00000605166 RNF19BQ6ZMZ0 732 aa9.35□□□□□ -0.91
HMGB1P51-201ENST00000605166 FOXD4L4Q8WXT5 416 aaPredicted RBP9.35□□□□□ -0.91
HMGB1P51-201ENST00000605166 THAP11Q96EK4 314 aa9.35□□□□□ -0.91
HMGB1P51-201ENST00000605166 F12P00748 615 aaPredicted RBP9.34□□□□□ -0.91
HMGB1P51-201ENST00000605166 SND1Q7KZF4 910 aaKnown RBP eCLIP9.34□□□□□ -0.91
HMGB1P51-201ENST00000605166 CCDC27Q2M243 656 aa9.33□□□□□ -0.92
HMGB1P51-201ENST00000605166 PLEKHM2Q8IWE5 1019 aa9.33□□□□□ -0.92
HMGB1P51-201ENST00000605166 GNEQ9Y223 722 aaKnown RBP9.33□□□□□ -0.92
HMGB1P51-201ENST00000605166 PIK3CDO00329 1044 aa9.32□□□□□ -0.92
HMGB1P51-201ENST00000605166 PTPRNQ16849 979 aa9.32□□□□□ -0.92
HMGB1P51-201ENST00000605166 MSS51Q4VC12 460 aa9.32□□□□□ -0.92
HMGB1P51-201ENST00000605166 USP17L3A6NCW0 530 aa9.31□□□□□ -0.92
HMGB1P51-201ENST00000605166 USP17L4A6NCW7 530 aa9.31□□□□□ -0.92
HMGB1P51-201ENST00000605166 PPEF1O14829 653 aaPredicted RBP9.31□□□□□ -0.92
HMGB1P51-201ENST00000605166 USP17L2Q6R6M4 530 aa9.31□□□□□ -0.92
HMGB1P51-201ENST00000605166 USP17L1Q7RTZ2 530 aa9.31□□□□□ -0.92
HMGB1P51-201ENST00000605166 ZNF592Q92610 1267 aa9.31□□□□□ -0.92
HMGB1P51-201ENST00000605166 ZMIZ1Q9ULJ6 1067 aa9.31□□□□□ -0.92
HMGB1P51-201ENST00000605166 USP17L5A8MUK1 530 aa9.3□□□□□ -0.92
HMGB1P51-201ENST00000605166 GFRA3O60609 400 aa9.3□□□□□ -0.92
HMGB1P51-201ENST00000605166 SKIP12755 728 aa9.3□□□□□ -0.92
HMGB1P51-201ENST00000605166 JUNDP17535 347 aa9.3□□□□□ -0.92
HMGB1P51-201ENST00000605166 RBM25P49756 843 aaKnown RBP9.3□□□□□ -0.92
HMGB1P51-201ENST00000605166 TMEM164Q5U3C3 297 aa9.3□□□□□ -0.92
HMGB1P51-201ENST00000605166 FAM160A2Q8N612 972 aaPredicted RBP9.3□□□□□ -0.92
HMGB1P51-201ENST00000605166 MAP10Q9P2G4 905 aa9.29□□□□□ -0.92
HMGB1P51-201ENST00000605166 NOVA2Q9UNW9 492 aaKnown RBP9.29□□□□□ -0.92
HMGB1P51-201ENST00000605166 AMOTL2Q9Y2J4 779 aa9.29□□□□□ -0.92
HMGB1P51-201ENST00000605166 GPSM3Q9Y4H4 160 aa9.29□□□□□ -0.92
HMGB1P51-201ENST00000605166 FAM196BA6NMK8 535 aa9.28□□□□□ -0.92
HMGB1P51-201ENST00000605166 CD2BP2O95400 341 aaKnown RBP9.28□□□□□ -0.92
HMGB1P51-201ENST00000605166 MCCD1P59942 119 aaPredicted RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms