RNA–Protein interactions for RNA: ENST00000604181.1

CCDC12-210, Transcript of coiled-coil domain containing 12, humanhuman

TSL 4

Gene CCDC12, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-210ENST00000604181 A0A0G2JS52 829 aa24.83■■□□□ 1.57
CCDC12-210ENST00000604181 MYT1Q01538 1121 aa24.83■■□□□ 1.57
CCDC12-210ENST00000604181 FAM182BQ5T319 152 aa24.82■■□□□ 1.56
CCDC12-210ENST00000604181 ARHGEF28Q8N1W1 1705 aaKnown RBP24.79■■□□□ 1.56
CCDC12-210ENST00000604181 SPATA31A5Q5VU36 1347 aa24.79■■□□□ 1.56
CCDC12-210ENST00000604181 SPATA31A7Q8IWB4 1347 aa24.79■■□□□ 1.56
CCDC12-210ENST00000604181 EIF3AQ14152 1382 aaKnown RBP24.79■■□□□ 1.56
CCDC12-210ENST00000604181 ATP7BP35670 1465 aa24.78■■□□□ 1.56
CCDC12-210ENST00000604181 PSDA5PKW4 1024 aaPredicted RBP24.78■■□□□ 1.56
CCDC12-210ENST00000604181 NGDNQ8NEJ9 315 aaKnown RBP24.78■■□□□ 1.56
CCDC12-210ENST00000604181 PAK3O75914 559 aaPredicted RBP24.77■■□□□ 1.56
CCDC12-210ENST00000604181 THSD7AQ9UPZ6 1657 aa24.77■■□□□ 1.56
CCDC12-210ENST00000604181 LRP5O75197 1615 aa24.75■■□□□ 1.55
CCDC12-210ENST00000604181 BAG6P46379 1132 aa24.74■■□□□ 1.55
CCDC12-210ENST00000604181 EN1Q05925 392 aaPredicted RBP24.74■■□□□ 1.55
CCDC12-210ENST00000604181 NUDT16Q96DE0 195 aaKnown RBP24.74■■□□□ 1.55
CCDC12-210ENST00000604181 PRDM11Q9NQV5 511 aa24.74■■□□□ 1.55
CCDC12-210ENST00000604181 KIAA0232Q92628 1395 aa24.73■■□□□ 1.55
CCDC12-210ENST00000604181 CHRNA2Q15822 529 aa24.73■■□□□ 1.55
CCDC12-210ENST00000604181 PHRF1Q9P1Y6 1649 aaKnown RBP24.72■■□□□ 1.55
CCDC12-210ENST00000604181 ITSN1Q15811 1721 aa24.71■■□□□ 1.55
CCDC12-210ENST00000604181 RGPD1P0DJD0 1748 aa24.7■■□□□ 1.54
CCDC12-210ENST00000604181 TNS1Q9HBL0 1735 aaKnown RBP24.7■■□□□ 1.54
CCDC12-210ENST00000604181 HRCP23327 699 aa24.7■■□□□ 1.54
CCDC12-210ENST00000604181 NUTM2GQ5VZR2 741 aa24.7■■□□□ 1.54
CCDC12-210ENST00000604181 SPATA31A1Q5TZJ5 1347 aa24.69■■□□□ 1.54
CCDC12-210ENST00000604181 ZC3H6P61129 1189 aaKnown RBP24.68■■□□□ 1.54
CCDC12-210ENST00000604181 CDK19Q9BWU1 502 aa24.68■■□□□ 1.54
CCDC12-210ENST00000604181 TOPAZ1Q8N9V7 1692 aa24.67■■□□□ 1.54
CCDC12-210ENST00000604181 STAC3Q96MF2 364 aa24.67■■□□□ 1.54
CCDC12-210ENST00000604181 STRN4Q9NRL3 753 aa24.66■■□□□ 1.54
CCDC12-210ENST00000604181 DISP2A7MBM2 1401 aa24.66■■□□□ 1.54
CCDC12-210ENST00000604181 POLR3AO14802 1390 aaPredicted RBP24.66■■□□□ 1.54
CCDC12-210ENST00000604181 ACEP12821 1306 aa24.64■■□□□ 1.54
CCDC12-210ENST00000604181 R3HDM1Q15032 1099 aaKnown RBP24.63■■□□□ 1.53
CCDC12-210ENST00000604181 EZH2Q15910 746 aaKnown RBP24.63■■□□□ 1.53
CCDC12-210ENST00000604181 NBPF8Q3BBV2 869 aa24.63■■□□□ 1.53
CCDC12-210ENST00000604181 NRKQ7Z2Y5 1582 aa24.62■■□□□ 1.53
CCDC12-210ENST00000604181 TRIM37O94972 964 aa24.61■■□□□ 1.53
CCDC12-210ENST00000604181 NBPF1Q3BBV0 1214 aa24.61■■□□□ 1.53
CCDC12-210ENST00000604181 CAMTA1Q9Y6Y1 1673 aa24.6■■□□□ 1.53
CCDC12-210ENST00000604181 USP35Q9P2H5 1018 aa24.6■■□□□ 1.53
CCDC12-210ENST00000604181 CCDC61Q9Y6R9 512 aa24.6■■□□□ 1.53
CCDC12-210ENST00000604181 SSH2Q76I76 1423 aa24.6■■□□□ 1.53
CCDC12-210ENST00000604181 PLEKHG3A1L390 1219 aa24.59■■□□□ 1.53
CCDC12-210ENST00000604181 CAMKK2Q96RR4 588 aa24.59■■□□□ 1.53
CCDC12-210ENST00000604181 KIAA1210Q9ULL0 1709 aa24.58■■□□□ 1.52
CCDC12-210ENST00000604181 LMO7Q8WWI1 1683 aa24.57■■□□□ 1.52
CCDC12-210ENST00000604181 LARP1Q6PKG0 1096 aaKnown RBP24.57■■□□□ 1.52
CCDC12-210ENST00000604181 USP19O94966 1318 aa24.57■■□□□ 1.52
CCDC12-210ENST00000604181 FAM196AQ6ZSG2 479 aa24.55■■□□□ 1.52
CCDC12-210ENST00000604181 ABTB2Q8N961 1025 aa24.55■■□□□ 1.52
CCDC12-210ENST00000604181 BARGINQ6ZT62 677 aa24.54■■□□□ 1.52
CCDC12-210ENST00000604181 CPDO75976 1380 aa24.54■■□□□ 1.52
CCDC12-210ENST00000604181 EVA1CP58658 441 aa24.53■■□□□ 1.52
CCDC12-210ENST00000604181 APBA3O96018 575 aa24.52■■□□□ 1.52
CCDC12-210ENST00000604181 CABP2Q9NPB3 220 aa24.51■■□□□ 1.51
CCDC12-210ENST00000604181 PPIP5K1Q6PFW1 1433 aa24.51■■□□□ 1.51
CCDC12-210ENST00000604181 RREB1Q92766 1687 aa24.5■■□□□ 1.51
CCDC12-210ENST00000604181 GCP02774 474 aa24.49■■□□□ 1.51
CCDC12-210ENST00000604181 TCP11L2Q8N4U5 519 aa24.49■■□□□ 1.51
CCDC12-210ENST00000604181 SRPK2P78362 688 aaKnown RBP24.48■■□□□ 1.51
CCDC12-210ENST00000604181 PDE3BQ13370 1112 aa24.48■■□□□ 1.51
CCDC12-210ENST00000604181 NUP188Q5SRE5 1749 aa24.48■■□□□ 1.51
CCDC12-210ENST00000604181 COL5A2P05997 1499 aaPredicted RBP24.47■■□□□ 1.51
CCDC12-210ENST00000604181 CENPJQ9HC77 1338 aaPredicted RBP24.47■■□□□ 1.51
CCDC12-210ENST00000604181 NLRP13Q86W25 1043 aa24.45■■□□□ 1.5
CCDC12-210ENST00000604181 PARD3Q8TEW0 1356 aa24.44■■□□□ 1.5
CCDC12-210ENST00000604181 QRICH2Q9H0J4 1663 aa24.44■■□□□ 1.5
CCDC12-210ENST00000604181 PARP4Q9UKK3 1724 aaKnown RBP24.44■■□□□ 1.5
CCDC12-210ENST00000604181 USP6P35125 1406 aa24.43■■□□□ 1.5
CCDC12-210ENST00000604181 CABP1Q9NZU7 370 aa24.42■■□□□ 1.5
CCDC12-210ENST00000604181 ZBTB7CA1YPR0 619 aa24.41■■□□□ 1.5
CCDC12-210ENST00000604181 THRAP3Q9Y2W1 955 aaKnown RBP24.41■■□□□ 1.5
CCDC12-210ENST00000604181 SLIT3O75094 1523 aa24.4■■□□□ 1.5
CCDC12-210ENST00000604181 PEAK1Q9H792 1746 aa24.4■■□□□ 1.5
CCDC12-210ENST00000604181 CRB1P82279 1406 aa24.39■■□□□ 1.5
CCDC12-210ENST00000604181 PIK3C2AO00443 1686 aa24.39■■□□□ 1.49
CCDC12-210ENST00000604181 COL18A1P39060 1754 aa24.39■■□□□ 1.49
CCDC12-210ENST00000604181 NLRP6P59044 892 aa24.38■■□□□ 1.49
CCDC12-210ENST00000604181 LRRC37A3O60309 1634 aa24.37■■□□□ 1.49
CCDC12-210ENST00000604181 PTF1AQ7RTS3 328 aa24.37■■□□□ 1.49
CCDC12-210ENST00000604181 BRD4O60885 1362 aaPredicted RBP24.37■■□□□ 1.49
CCDC12-210ENST00000604181 AATKQ6ZMQ8 1374 aa24.37■■□□□ 1.49
CCDC12-210ENST00000604181 AXIN2Q9Y2T1 843 aa24.36■■□□□ 1.49
CCDC12-210ENST00000604181 SBF2Q86WG5 1849 aa24.35■■□□□ 1.49
CCDC12-210ENST00000604181 L3MBTL2Q969R5 705 aa24.35■■□□□ 1.49
CCDC12-210ENST00000604181 OVOS2A0A0G2JMS6 1433 aa24.33■■□□□ 1.49
CCDC12-210ENST00000604181 OVOS2A0A0J9YW53 1432 aa24.33■■□□□ 1.49
CCDC12-210ENST00000604181 OVOS2Q6IE36 1432 aa24.33■■□□□ 1.49
CCDC12-210ENST00000604181 NBPF14Q5TI25 921 aa24.32■■□□□ 1.48
CCDC12-210ENST00000604181 TRPM1Q7Z4N2 1603 aa24.31■■□□□ 1.48
CCDC12-210ENST00000604181 WNK3Q9BYP7 1800 aa24.31■■□□□ 1.48
CCDC12-210ENST00000604181 RGPD5Q99666 1765 aa24.3■■□□□ 1.48
CCDC12-210ENST00000604181 TOM1L2Q6ZVM7 507 aa24.3■■□□□ 1.48
CCDC12-210ENST00000604181 ANO8Q9HCE9 1232 aaPredicted RBP24.3■■□□□ 1.48
CCDC12-210ENST00000604181 CPSF1Q10570 1443 aaKnown RBP24.29■■□□□ 1.48
CCDC12-210ENST00000604181 DDB1Q16531 1140 aa24.29■■□□□ 1.48
CCDC12-210ENST00000604181 ARHGEF25Q86VW2 580 aa24.28■■□□□ 1.48
CCDC12-210ENST00000604181 MARCH10Q8NA82 808 aaPredicted RBP24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms