RNA–Protein interactions for RNA: ENST00000603380.5

ZNF559-213, Transcript of zinc finger protein 559, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF559, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF559-213ENST00000603380 ZKSCAN2Q63HK3 967 aa13.75□□□□□ -0.21
ZNF559-213ENST00000603380 ZNF771Q7L3S4 317 aaPredicted RBP13.75□□□□□ -0.21
ZNF559-213ENST00000603380 SPTLC3Q9NUV7 552 aa13.75□□□□□ -0.21
ZNF559-213ENST00000603380 NUP153P49790 1475 aaKnown RBP13.74□□□□□ -0.21
ZNF559-213ENST00000603380 CCDC141Q6ZP82 1450 aa13.74□□□□□ -0.21
ZNF559-213ENST00000603380 FTSJ3Q8IY81 847 aaKnown RBP13.74□□□□□ -0.21
ZNF559-213ENST00000603380 NUP160Q12769 1436 aa13.73□□□□□ -0.21
ZNF559-213ENST00000603380 CDK11BP21127 795 aaKnown RBP13.73□□□□□ -0.21
ZNF559-213ENST00000603380 NEUROD2Q15784 382 aa13.73□□□□□ -0.21
ZNF559-213ENST00000603380 PAXIP1Q6ZW49 1069 aaPredicted RBP13.73□□□□□ -0.21
ZNF559-213ENST00000603380 C17orf53Q8N3J3 647 aaPredicted RBP13.73□□□□□ -0.21
ZNF559-213ENST00000603380 FEZ1Q99689 392 aa13.73□□□□□ -0.21
ZNF559-213ENST00000603380 RRP7AQ9Y3A4 280 aaKnown RBP13.73□□□□□ -0.21
ZNF559-213ENST00000603380 IQGAP2Q13576 1575 aa13.73□□□□□ -0.21
ZNF559-213ENST00000603380 RNF17Q9BXT8 1623 aaKnown RBP13.73□□□□□ -0.21
ZNF559-213ENST00000603380 LNPKQ9C0E8 428 aa13.73□□□□□ -0.21
ZNF559-213ENST00000603380 PLA2R1Q13018 1463 aa13.73□□□□□ -0.21
ZNF559-213ENST00000603380 KANK1Q14678 1352 aa13.73□□□□□ -0.21
ZNF559-213ENST00000603380 AEBP2Q6ZN18 517 aaPredicted RBP13.72□□□□□ -0.21
ZNF559-213ENST00000603380 WDR63Q8IWG1 891 aa13.72□□□□□ -0.21
ZNF559-213ENST00000603380 MYOM1P52179 1685 aa13.72□□□□□ -0.21
ZNF559-213ENST00000603380 TBC1D9Q6ZT07 1266 aa13.72□□□□□ -0.21
ZNF559-213ENST00000603380 ZDHHC9Q9Y397 364 aa13.72□□□□□ -0.21
ZNF559-213ENST00000603380 PRG4Q92954 1404 aaPredicted RBP13.72□□□□□ -0.21
ZNF559-213ENST00000603380 MYO5CQ9NQX4 1742 aa13.72□□□□□ -0.21
ZNF559-213ENST00000603380 SLC20A2Q08357 652 aa13.72□□□□□ -0.21
ZNF559-213ENST00000603380 MPNDQ8N594 471 aa13.72□□□□□ -0.21
ZNF559-213ENST00000603380 C9orf84Q5VXU9 1444 aa13.72□□□□□ -0.21
ZNF559-213ENST00000603380 PBRM1Q86U86 1689 aa13.71□□□□□ -0.21
ZNF559-213ENST00000603380 IQSEC2Q5JU85 1478 aa13.71□□□□□ -0.21
ZNF559-213ENST00000603380 OGFRQ9NZT2 677 aa13.71□□□□□ -0.21
ZNF559-213ENST00000603380 SHANK2Q9UPX8 1470 aa13.71□□□□□ -0.21
ZNF559-213ENST00000603380 CFAP74Q9C0B2 1584 aa13.71□□□□□ -0.21
ZNF559-213ENST00000603380 GABPB1Q06547 395 aaPredicted RBP13.71□□□□□ -0.22
ZNF559-213ENST00000603380 CDCA8Q53HL2 280 aa13.71□□□□□ -0.22
ZNF559-213ENST00000603380 CHAMP1Q96JM3 812 aa13.71□□□□□ -0.22
ZNF559-213ENST00000603380 TROQ12816 1431 aaPredicted RBP13.7□□□□□ -0.22
ZNF559-213ENST00000603380 CTIFO43310 598 aaKnown RBP13.7□□□□□ -0.22
ZNF559-213ENST00000603380 SLFN14P0C7P3 912 aa13.7□□□□□ -0.22
ZNF559-213ENST00000603380 KCNJ4P48050 445 aa13.7□□□□□ -0.22
ZNF559-213ENST00000603380 CHD1LQ86WJ1 897 aa13.7□□□□□ -0.22
ZNF559-213ENST00000603380 TTC12Q9H892 705 aaPredicted RBP13.7□□□□□ -0.22
ZNF559-213ENST00000603380 DDX19BQ9UMR2 479 aa13.7□□□□□ -0.22
ZNF559-213ENST00000603380 TRIM27P14373 513 aa13.7□□□□□ -0.22
ZNF559-213ENST00000603380 TCP11L2Q8N4U5 519 aa13.7□□□□□ -0.22
ZNF559-213ENST00000603380 POLR3AO14802 1390 aaPredicted RBP13.7□□□□□ -0.22
ZNF559-213ENST00000603380 ERCC6Q03468 1493 aa13.69□□□□□ -0.22
ZNF559-213ENST00000603380 RIOK3O14730 519 aaKnown RBP13.69□□□□□ -0.22
ZNF559-213ENST00000603380 TSPY26PQ9H489 355 aa13.69□□□□□ -0.22
ZNF559-213ENST00000603380 PDS5BQ9NTI5 1447 aa13.69□□□□□ -0.22
ZNF559-213ENST00000603380 ZBTB40Q9NUA8 1239 aa13.69□□□□□ -0.22
ZNF559-213ENST00000603380 SYNJ2O15056 1496 aa13.68□□□□□ -0.22
ZNF559-213ENST00000603380 CDC42BPAQ5VT25 1732 aa13.68□□□□□ -0.22
ZNF559-213ENST00000603380 VGFO15240 615 aaPredicted RBP13.68□□□□□ -0.22
ZNF559-213ENST00000603380 ITPRIPQ8IWB1 547 aa13.68□□□□□ -0.22
ZNF559-213ENST00000603380 RUNDC1Q96C34 613 aa13.68□□□□□ -0.22
ZNF559-213ENST00000603380 RABEP1Q15276 862 aa13.68□□□□□ -0.22
ZNF559-213ENST00000603380 CWC22Q9HCG8 908 aaKnown RBP13.68□□□□□ -0.22
ZNF559-213ENST00000603380 SHPRHQ149N8 1683 aa13.68□□□□□ -0.22
ZNF559-213ENST00000603380 IQGAP1P46940 1657 aa13.67□□□□□ -0.22
ZNF559-213ENST00000603380 MBD3O95983 291 aa13.67□□□□□ -0.22
ZNF559-213ENST00000603380 ZGPATQ8N5A5 531 aaKnown RBP13.67□□□□□ -0.22
ZNF559-213ENST00000603380 CCDC27Q2M243 656 aa13.66□□□□□ -0.22
ZNF559-213ENST00000603380 DIAPH3Q9NSV4 1193 aa13.66□□□□□ -0.22
ZNF559-213ENST00000603380 CTNNA3Q9UI47 895 aa13.66□□□□□ -0.22
ZNF559-213ENST00000603380 DNAJC2Q99543 621 aaKnown RBP13.66□□□□□ -0.22
ZNF559-213ENST00000603380 MAPK8IP2Q13387 824 aaPredicted RBP13.65□□□□□ -0.22
ZNF559-213ENST00000603380 ATF7IPQ6VMQ6 1270 aa13.65□□□□□ -0.22
ZNF559-213ENST00000603380 NCBP1Q09161 790 aaKnown RBP13.65□□□□□ -0.23
ZNF559-213ENST00000603380 UVSSAQ2YD98 709 aa13.64□□□□□ -0.23
ZNF559-213ENST00000603380 TMEM57Q8N5G2 664 aa13.64□□□□□ -0.23
ZNF559-213ENST00000603380 SMC4Q9NTJ3 1288 aa13.64□□□□□ -0.23
ZNF559-213ENST00000603380 USP25Q9UHP3 1055 aa13.64□□□□□ -0.23
ZNF559-213ENST00000603380 RAPGEF6Q8TEU7 1601 aa13.64□□□□□ -0.23
ZNF559-213ENST00000603380 TULP2O00295 520 aa13.64□□□□□ -0.23
ZNF559-213ENST00000603380 KIAA1524Q8TCG1 905 aa13.64□□□□□ -0.23
ZNF559-213ENST00000603380 CARD14Q9BXL6 1004 aa13.64□□□□□ -0.23
ZNF559-213ENST00000603380 DDX41Q9UJV9 622 aaKnown RBP13.64□□□□□ -0.23
ZNF559-213ENST00000603380 CCDC66A2RUB6 948 aa13.63□□□□□ -0.23
ZNF559-213ENST00000603380 CAPN2P17655 700 aa13.63□□□□□ -0.23
ZNF559-213ENST00000603380 TERF2Q15554 542 aa13.63□□□□□ -0.23
ZNF559-213ENST00000603380 TIGD1Q96MW7 591 aa13.63□□□□□ -0.23
ZNF559-213ENST00000603380 ADCY5O95622 1261 aa13.63□□□□□ -0.23
ZNF559-213ENST00000603380 CT47B1P0C2W7 299 aaPredicted RBP13.62□□□□□ -0.23
ZNF559-213ENST00000603380 SSH1Q8WYL5 1049 aa13.62□□□□□ -0.23
ZNF559-213ENST00000603380 FAM184AQ8NB25 1140 aa13.62□□□□□ -0.23
ZNF559-213ENST00000603380 MORC2Q9Y6X9 1032 aaPredicted RBP13.62□□□□□ -0.23
ZNF559-213ENST00000603380 CHAF1AQ13111 956 aaPredicted RBP13.62□□□□□ -0.23
ZNF559-213ENST00000603380 CDC45O75419 566 aa13.61□□□□□ -0.23
ZNF559-213ENST00000603380 ANKRD45Q5TZF3 282 aa13.61□□□□□ -0.23
ZNF559-213ENST00000603380 TSPY4P0CV99 314 aa13.61□□□□□ -0.23
ZNF559-213ENST00000603380 TSPY10P0CW01 314 aa13.61□□□□□ -0.23
ZNF559-213ENST00000603380 NOB1Q9ULX3 412 aaKnown RBP13.61□□□□□ -0.23
ZNF559-213ENST00000603380 URB2Q14146 1524 aaKnown RBP13.61□□□□□ -0.23
ZNF559-213ENST00000603380 CEP152O94986 1710 aa13.6□□□□□ -0.23
ZNF559-213ENST00000603380 SYCP1Q15431 976 aa13.6□□□□□ -0.23
ZNF559-213ENST00000603380 PYCARDQ9ULZ3 195 aa13.6□□□□□ -0.23
ZNF559-213ENST00000603380 TSR2Q969E8 191 aaKnown RBP13.6□□□□□ -0.23
ZNF559-213ENST00000603380 KCNF1Q9H3M0 494 aa13.6□□□□□ -0.23
ZNF559-213ENST00000603380 NOS1P29475 1434 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms