RNA–Protein interactions for RNA: ENST00000602492.5

PPFIA3-204, Transcript of PTPRF interacting protein alpha 3, human

TSL 4

Gene PPFIA3, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPFIA3-204	ENST00000602492	MYT1	Q01538	1121 aa		29.5	■■■□□ 2.31
PPFIA3-204	ENST00000602492	NRAP	Q86VF7	1730 aa		29.49	■■■□□ 2.31
PPFIA3-204	ENST00000602492	PAK3	O75914	559 aa	Predicted RBP	29.49	■■■□□ 2.31
PPFIA3-204	ENST00000602492	ARHGEF28	Q8N1W1	1705 aa	Known RBP	29.48	■■■□□ 2.31
PPFIA3-204	ENST00000602492	COL14A1	Q05707	1796 aa	Known RBP	29.48	■■■□□ 2.31
PPFIA3-204	ENST00000602492	DEFB132	Q7Z7B7	95 aa		29.47	■■■□□ 2.31
PPFIA3-204	ENST00000602492	FAM98C	Q17RN3	349 aa	Known RBP	29.46	■■■□□ 2.31
PPFIA3-204	ENST00000602492	ATP7B	P35670	1465 aa		29.46	■■■□□ 2.31
PPFIA3-204	ENST00000602492	NUDT16	Q96DE0	195 aa	Known RBP	29.45	■■■□□ 2.31
PPFIA3-204	ENST00000602492	ITSN1	Q15811	1721 aa		29.45	■■■□□ 2.3
PPFIA3-204	ENST00000602492	PRDM11	Q9NQV5	511 aa		29.42	■■■□□ 2.3
PPFIA3-204	ENST00000602492	CRYBG1	Q9Y4K1	1723 aa		29.41	■■■□□ 2.3
PPFIA3-204	ENST00000602492	CDK19	Q9BWU1	502 aa		29.4	■■■□□ 2.3
PPFIA3-204	ENST00000602492	SPATA31A5	Q5VU36	1347 aa		29.39	■■■□□ 2.3
PPFIA3-204	ENST00000602492	SPATA31A7	Q8IWB4	1347 aa		29.39	■■■□□ 2.3
PPFIA3-204	ENST00000602492	KIAA1210	Q9ULL0	1709 aa		29.36	■■■□□ 2.29
PPFIA3-204	ENST00000602492	BAG6	P46379	1132 aa		29.35	■■■□□ 2.29
PPFIA3-204	ENST00000602492	KIAA0232	Q92628	1395 aa		29.35	■■■□□ 2.29
PPFIA3-204	ENST00000602492	CCDC61	Q9Y6R9	512 aa		29.34	■■■□□ 2.29
PPFIA3-204	ENST00000602492	POLR3A	O14802	1390 aa	Predicted RBP	29.34	■■■□□ 2.29
PPFIA3-204	ENST00000602492	ACE	P12821	1306 aa		29.32	■■■□□ 2.28
PPFIA3-204	ENST00000602492	TOPAZ1	Q8N9V7	1692 aa		29.31	■■■□□ 2.28
PPFIA3-204	ENST00000602492	CHRNA2	Q15822	529 aa		29.31	■■■□□ 2.28
PPFIA3-204	ENST00000602492	NBPF8	Q3BBV2	869 aa		29.31	■■■□□ 2.28
PPFIA3-204	ENST00000602492	NUTM2G	Q5VZR2	741 aa		29.31	■■■□□ 2.28
PPFIA3-204	ENST00000602492	PHRF1	Q9P1Y6	1649 aa	Known RBP	29.31	■■■□□ 2.28
PPFIA3-204	ENST00000602492	PLEKHG3	A1L390	1219 aa		29.3	■■■□□ 2.28
PPFIA3-204	ENST00000602492	THSD7A	Q9UPZ6	1657 aa		29.29	■■■□□ 2.28
PPFIA3-204	ENST00000602492	ZC3H6	P61129	1189 aa	Known RBP	29.29	■■■□□ 2.28
PPFIA3-204	ENST00000602492	NBPF1	Q3BBV0	1214 aa		29.29	■■■□□ 2.28
PPFIA3-204	ENST00000602492	SPATA31A1	Q5TZJ5	1347 aa		29.28	■■■□□ 2.28
PPFIA3-204	ENST00000602492	FAM182B	Q5T319	152 aa		29.27	■■■□□ 2.28
PPFIA3-204	ENST00000602492	STRN4	Q9NRL3	753 aa		29.27	■■■□□ 2.28
PPFIA3-204	ENST00000602492	RGPD1	P0DJD0	1748 aa		29.25	■■■□□ 2.27
PPFIA3-204	ENST00000602492	ABTB2	Q8N961	1025 aa		29.24	■■■□□ 2.27
PPFIA3-204	ENST00000602492	CENPJ	Q9HC77	1338 aa	Predicted RBP	29.23	■■■□□ 2.27
PPFIA3-204	ENST00000602492	SRPK2	P78362	688 aa	Known RBP	29.23	■■■□□ 2.27
PPFIA3-204	ENST00000602492	EN1	Q05925	392 aa	Predicted RBP	29.22	■■■□□ 2.27
PPFIA3-204	ENST00000602492	EVA1C	P58658	441 aa		29.21	■■■□□ 2.27
PPFIA3-204	ENST00000602492	PPIP5K1	Q6PFW1	1433 aa		29.2	■■■□□ 2.27
PPFIA3-204	ENST00000602492	PSD	A5PKW4	1024 aa	Predicted RBP	29.2	■■■□□ 2.26
PPFIA3-204	ENST00000602492	NRK	Q7Z2Y5	1582 aa		29.2	■■■□□ 2.26
PPFIA3-204	ENST00000602492	SSH2	Q76I76	1423 aa		29.2	■■■□□ 2.26
PPFIA3-204	ENST00000602492	DISP2	A7MBM2	1401 aa		29.19	■■■□□ 2.26
PPFIA3-204	ENST00000602492	USP19	O94966	1318 aa		29.19	■■■□□ 2.26
PPFIA3-204	ENST00000602492	CPD	O75976	1380 aa		29.18	■■■□□ 2.26
PPFIA3-204	ENST00000602492	CABP2	Q9NPB3	220 aa		29.18	■■■□□ 2.26
PPFIA3-204	ENST00000602492	USP35	Q9P2H5	1018 aa		29.18	■■■□□ 2.26
PPFIA3-204	ENST00000602492	LRP5	O75197	1615 aa		29.17	■■■□□ 2.26
PPFIA3-204	ENST00000602492	FAM196A	Q6ZSG2	479 aa		29.17	■■■□□ 2.26
PPFIA3-204	ENST00000602492	NLRP13	Q86W25	1043 aa		29.17	■■■□□ 2.26
PPFIA3-204	ENST00000602492	BARGIN	Q6ZT62	677 aa		29.15	■■■□□ 2.26
PPFIA3-204	ENST00000602492	CAMTA1	Q9Y6Y1	1673 aa		29.15	■■■□□ 2.26
PPFIA3-204	ENST00000602492	BRD4	O60885	1362 aa	Predicted RBP	29.14	■■■□□ 2.26
PPFIA3-204	ENST00000602492	TNS1	Q9HBL0	1735 aa	Known RBP	29.14	■■■□□ 2.26
PPFIA3-204	ENST00000602492	TRIM37	O94972	964 aa		29.13	■■■□□ 2.25
PPFIA3-204	ENST00000602492	LARP1	Q6PKG0	1096 aa	Known RBP	29.13	■■■□□ 2.25
PPFIA3-204	ENST00000602492	QRICH2	Q9H0J4	1663 aa		29.12	■■■□□ 2.25
PPFIA3-204	ENST00000602492	GC	P02774	474 aa		29.12	■■■□□ 2.25
PPFIA3-204	ENST00000602492	PDE3B	Q13370	1112 aa		29.12	■■■□□ 2.25
PPFIA3-204	ENST00000602492	LMO7	Q8WWI1	1683 aa		29.12	■■■□□ 2.25
PPFIA3-204	ENST00000602492	TCP11L2	Q8N4U5	519 aa		29.11	■■■□□ 2.25
PPFIA3-204	ENST00000602492	EZH2	Q15910	746 aa	Known RBP	29.1	■■■□□ 2.25
PPFIA3-204	ENST00000602492	L3MBTL2	Q969R5	705 aa		29.1	■■■□□ 2.25
PPFIA3-204	ENST00000602492	CABP1	Q9NZU7	370 aa		29.09	■■■□□ 2.25
PPFIA3-204	ENST00000602492	R3HDM1	Q15032	1099 aa	Known RBP	29.08	■■■□□ 2.25
PPFIA3-204	ENST00000602492	USP6	P35125	1406 aa		29.08	■■■□□ 2.25
PPFIA3-204	ENST00000602492	CAMKK2	Q96RR4	588 aa		29.07	■■■□□ 2.24
PPFIA3-204	ENST00000602492	THRAP3	Q9Y2W1	955 aa	Known RBP	29.07	■■■□□ 2.24
PPFIA3-204	ENST00000602492	APBA3	O96018	575 aa		29.06	■■■□□ 2.24
PPFIA3-204	ENST00000602492	COL5A2	P05997	1499 aa	Predicted RBP	29.05	■■■□□ 2.24
PPFIA3-204	ENST00000602492	PARD3	Q8TEW0	1356 aa		29.05	■■■□□ 2.24
PPFIA3-204	ENST00000602492	NLRP6	P59044	892 aa		29.05	■■■□□ 2.24
PPFIA3-204	ENST00000602492	EVC2	Q86UK5	1308 aa		29.04	■■■□□ 2.24
PPFIA3-204	ENST00000602492	ZBTB7C	A1YPR0	619 aa		29.03	■■■□□ 2.24
PPFIA3-204	ENST00000602492	SLIT3	O75094	1523 aa		29	■■■□□ 2.23
PPFIA3-204	ENST00000602492	SIN3A	Q96ST3	1273 aa		29	■■■□□ 2.23
PPFIA3-204	ENST00000602492	TRPM1	Q7Z4N2	1603 aa		29	■■■□□ 2.23
PPFIA3-204	ENST00000602492	CRB1	P82279	1406 aa		29	■■■□□ 2.23
PPFIA3-204	ENST00000602492	AATK	Q6ZMQ8	1374 aa		29	■■■□□ 2.23
PPFIA3-204	ENST00000602492	ROCK2	O75116	1388 aa	Known RBP	28.99	■■■□□ 2.23
PPFIA3-204	ENST00000602492	PARP4	Q9UKK3	1724 aa	Known RBP	28.97	■■■□□ 2.23
PPFIA3-204	ENST00000602492	C11orf95	C9JLR9	678 aa	Predicted RBP	28.95	■■■□□ 2.22
PPFIA3-204	ENST00000602492	NEUROD1	Q13562	356 aa		28.95	■■■□□ 2.22
PPFIA3-204	ENST00000602492	PIK3C2A	O00443	1686 aa		28.95	■■■□□ 2.22
PPFIA3-204	ENST00000602492	ZNF692	Q9BU19	519 aa	Predicted RBP	28.94	■■■□□ 2.22
PPFIA3-204	ENST00000602492	RREB1	Q92766	1687 aa		28.93	■■■□□ 2.22
PPFIA3-204	ENST00000602492	TOM1L2	Q6ZVM7	507 aa		28.92	■■■□□ 2.22
PPFIA3-204	ENST00000602492	TTC21B	Q7Z4L5	1316 aa		28.92	■■■□□ 2.22
PPFIA3-204	ENST00000602492	NBPF14	Q5TI25	921 aa		28.91	■■■□□ 2.22
PPFIA3-204	ENST00000602492	OVOS2	A0A0G2JMS6	1433 aa		28.91	■■■□□ 2.22
PPFIA3-204	ENST00000602492	OVOS2	A0A0J9YW53	1432 aa		28.91	■■■□□ 2.22
PPFIA3-204	ENST00000602492	OVOS2	Q6IE36	1432 aa		28.91	■■■□□ 2.22
PPFIA3-204	ENST00000602492	CPSF1	Q10570	1443 aa	Known RBP	28.89	■■■□□ 2.22
PPFIA3-204	ENST00000602492	DDB1	Q16531	1140 aa		28.89	■■■□□ 2.22
PPFIA3-204	ENST00000602492	KCNH5	Q8NCM2	988 aa		28.89	■■■□□ 2.22
PPFIA3-204	ENST00000602492	WDR17	Q8IZU2	1322 aa		28.89	■■■□□ 2.21
PPFIA3-204	ENST00000602492	NUP188	Q5SRE5	1749 aa		28.89	■■■□□ 2.21
PPFIA3-204	ENST00000602492	COL18A1	P39060	1754 aa		28.88	■■■□□ 2.21
PPFIA3-204	ENST00000602492	TTC21A	Q8NDW8	1320 aa		28.88	■■■□□ 2.21

Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms