RNA–Protein interactions for RNA: ENST00000602260.5

ZNF544-219, Transcript of zinc finger protein 544, humanhuman

TSL 4

Gene ZNF544, Length 552 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544-219ENST00000602260 CDK19Q9BWU1 502 aa16.57■□□□□ 0.24
ZNF544-219ENST00000602260 CABLES1Q8TDN4 633 aa16.56■□□□□ 0.24
ZNF544-219ENST00000602260 NUDT16Q96DE0 195 aaKnown RBP16.56■□□□□ 0.24
ZNF544-219ENST00000602260 ATP7BP35670 1465 aa16.55■□□□□ 0.24
ZNF544-219ENST00000602260 CENPJQ9HC77 1338 aaPredicted RBP16.54■□□□□ 0.24
ZNF544-219ENST00000602260 ONECUT3O60422 494 aaPredicted RBP16.54■□□□□ 0.24
ZNF544-219ENST00000602260 NGDNQ8NEJ9 315 aaKnown RBP16.54■□□□□ 0.24
ZNF544-219ENST00000602260 CCDC9Q9Y3X0 531 aaKnown RBP16.54■□□□□ 0.24
ZNF544-219ENST00000602260 TOPAZ1Q8N9V7 1692 aa16.53■□□□□ 0.24
ZNF544-219ENST00000602260 SEPT12Q8IYM1 358 aa16.53■□□□□ 0.24
ZNF544-219ENST00000602260 SF3B2Q13435 895 aaKnown RBP16.52■□□□□ 0.24
ZNF544-219ENST00000602260 NBPF8Q3BBV2 869 aa16.52■□□□□ 0.24
ZNF544-219ENST00000602260 CCDC61Q9Y6R9 512 aa16.51■□□□□ 0.23
ZNF544-219ENST00000602260 PHRF1Q9P1Y6 1649 aaKnown RBP16.51■□□□□ 0.23
ZNF544-219ENST00000602260 FAM83GA6ND36 823 aa16.5■□□□□ 0.23
ZNF544-219ENST00000602260 PLEKHG5O94827 1062 aa16.5■□□□□ 0.23
ZNF544-219ENST00000602260 KRT27Q7Z3Y8 459 aa16.5■□□□□ 0.23
ZNF544-219ENST00000602260 ROCK2O75116 1388 aaKnown RBP16.5■□□□□ 0.23
ZNF544-219ENST00000602260 BTG4Q9NY30 223 aa16.49■□□□□ 0.23
ZNF544-219ENST00000602260 RGPD1P0DJD0 1748 aa16.48■□□□□ 0.23
ZNF544-219ENST00000602260 PLEKHG3A1L390 1219 aa16.48■□□□□ 0.23
ZNF544-219ENST00000602260 SRPK2P78362 688 aaKnown RBP16.48■□□□□ 0.23
ZNF544-219ENST00000602260 THSD7AQ9UPZ6 1657 aa16.48■□□□□ 0.23
ZNF544-219ENST00000602260 TONSLQ96HA7 1378 aa16.48■□□□□ 0.23
ZNF544-219ENST00000602260 A0A0G2JS52 829 aa16.47■□□□□ 0.23
ZNF544-219ENST00000602260 PAK3O75914 559 aaPredicted RBP16.47■□□□□ 0.23
ZNF544-219ENST00000602260 MYT1Q01538 1121 aa16.47■□□□□ 0.23
ZNF544-219ENST00000602260 CABP2Q9NPB3 220 aa16.47■□□□□ 0.23
ZNF544-219ENST00000602260 POLR3AO14802 1390 aaPredicted RBP16.47■□□□□ 0.23
ZNF544-219ENST00000602260 ACEP12821 1306 aa16.46■□□□□ 0.23
ZNF544-219ENST00000602260 PRDM11Q9NQV5 511 aa16.46■□□□□ 0.23
ZNF544-219ENST00000602260 TRPM1Q7Z4N2 1603 aa16.45■□□□□ 0.22
ZNF544-219ENST00000602260 SPATA31A5Q5VU36 1347 aa16.45■□□□□ 0.22
ZNF544-219ENST00000602260 SPATA31A7Q8IWB4 1347 aa16.45■□□□□ 0.22
ZNF544-219ENST00000602260 FAM98CQ17RN3 349 aaKnown RBP16.44■□□□□ 0.22
ZNF544-219ENST00000602260 LRP5O75197 1615 aa16.44■□□□□ 0.22
ZNF544-219ENST00000602260 EVC2Q86UK5 1308 aa16.44■□□□□ 0.22
ZNF544-219ENST00000602260 NRKQ7Z2Y5 1582 aa16.43■□□□□ 0.22
ZNF544-219ENST00000602260 BAG6P46379 1132 aa16.43■□□□□ 0.22
ZNF544-219ENST00000602260 CARD11Q9BXL7 1154 aa16.43■□□□□ 0.22
ZNF544-219ENST00000602260 KIAA0232Q92628 1395 aa16.42■□□□□ 0.22
ZNF544-219ENST00000602260 DEFB132Q7Z7B7 95 aa16.42■□□□□ 0.22
ZNF544-219ENST00000602260 CABP1Q9NZU7 370 aa16.42■□□□□ 0.22
ZNF544-219ENST00000602260 BRD4O60885 1362 aaPredicted RBP16.41■□□□□ 0.22
ZNF544-219ENST00000602260 QRICH2Q9H0J4 1663 aa16.41■□□□□ 0.22
ZNF544-219ENST00000602260 TNS1Q9HBL0 1735 aaKnown RBP16.41■□□□□ 0.22
ZNF544-219ENST00000602260 DISP2A7MBM2 1401 aa16.4■□□□□ 0.22
ZNF544-219ENST00000602260 PPIP5K1Q6PFW1 1433 aa16.4■□□□□ 0.22
ZNF544-219ENST00000602260 NUTM2GQ5VZR2 741 aa16.39■□□□□ 0.21
ZNF544-219ENST00000602260 CPDO75976 1380 aa16.38■□□□□ 0.21
ZNF544-219ENST00000602260 LMO7Q8WWI1 1683 aa16.38■□□□□ 0.21
ZNF544-219ENST00000602260 PCGF6Q9BYE7 350 aa16.38■□□□□ 0.21
ZNF544-219ENST00000602260 SPATA31A1Q5TZJ5 1347 aa16.38■□□□□ 0.21
ZNF544-219ENST00000602260 ABTB2Q8N961 1025 aa16.37■□□□□ 0.21
ZNF544-219ENST00000602260 USP19O94966 1318 aa16.37■□□□□ 0.21
ZNF544-219ENST00000602260 SSH2Q76I76 1423 aa16.36■□□□□ 0.21
ZNF544-219ENST00000602260 ZC3H6P61129 1189 aaKnown RBP16.34■□□□□ 0.21
ZNF544-219ENST00000602260 CHRNA2Q15822 529 aa16.34■□□□□ 0.21
ZNF544-219ENST00000602260 PARD3Q8TEW0 1356 aa16.34■□□□□ 0.21
ZNF544-219ENST00000602260 SBNO2Q9Y2G9 1366 aa16.34■□□□□ 0.21
ZNF544-219ENST00000602260 FAM196AQ6ZSG2 479 aa16.33■□□□□ 0.2
ZNF544-219ENST00000602260 BARGINQ6ZT62 677 aa16.33■□□□□ 0.2
ZNF544-219ENST00000602260 NLRP13Q86W25 1043 aa16.33■□□□□ 0.2
ZNF544-219ENST00000602260 ZNF692Q9BU19 519 aaPredicted RBP16.33■□□□□ 0.2
ZNF544-219ENST00000602260 STRN4Q9NRL3 753 aa16.33■□□□□ 0.2
ZNF544-219ENST00000602260 CAMTA1Q9Y6Y1 1673 aa16.33■□□□□ 0.2
ZNF544-219ENST00000602260 PARP4Q9UKK3 1724 aaKnown RBP16.33■□□□□ 0.2
ZNF544-219ENST00000602260 USP6P35125 1406 aa16.32■□□□□ 0.2
ZNF544-219ENST00000602260 CLSPNQ9HAW4 1339 aa16.32■□□□□ 0.2
ZNF544-219ENST00000602260 SLIT3O75094 1523 aa16.31■□□□□ 0.2
ZNF544-219ENST00000602260 EVA1CP58658 441 aa16.31■□□□□ 0.2
ZNF544-219ENST00000602260 TIMELESSQ9UNS1 1208 aa16.31■□□□□ 0.2
ZNF544-219ENST00000602260 COL5A2P05997 1499 aaPredicted RBP16.3■□□□□ 0.2
ZNF544-219ENST00000602260 GCP02774 474 aa16.3■□□□□ 0.2
ZNF544-219ENST00000602260 EN1Q05925 392 aaPredicted RBP16.3■□□□□ 0.2
ZNF544-219ENST00000602260 THRAP3Q9Y2W1 955 aaKnown RBP16.3■□□□□ 0.2
ZNF544-219ENST00000602260 RREB1Q92766 1687 aa16.3■□□□□ 0.2
ZNF544-219ENST00000602260 ST20-MTHFSA0A0A6YYL1 179 aa16.29■□□□□ 0.2
ZNF544-219ENST00000602260 NLRP6P59044 892 aa16.29■□□□□ 0.2
ZNF544-219ENST00000602260 TCP11L2Q8N4U5 519 aa16.29■□□□□ 0.2
ZNF544-219ENST00000602260 PIK3C2AO00443 1686 aa16.28■□□□□ 0.2
ZNF544-219ENST00000602260 TTC21BQ7Z4L5 1316 aa16.28■□□□□ 0.2
ZNF544-219ENST00000602260 C11orf95C9JLR9 678 aaPredicted RBP16.28■□□□□ 0.2
ZNF544-219ENST00000602260 PDE3BQ13370 1112 aa16.28■□□□□ 0.2
ZNF544-219ENST00000602260 FAM182BQ5T319 152 aa16.28■□□□□ 0.2
ZNF544-219ENST00000602260 PUS7Q96PZ0 661 aaKnown RBP16.28■□□□□ 0.2
ZNF544-219ENST00000602260 TESK2Q96S53 571 aa16.28■□□□□ 0.2
ZNF544-219ENST00000602260 CRB1P82279 1406 aa16.28■□□□□ 0.2
ZNF544-219ENST00000602260 TMC1Q8TDI8 760 aa16.27■□□□□ 0.2
ZNF544-219ENST00000602260 USP35Q9P2H5 1018 aa16.27■□□□□ 0.2
ZNF544-219ENST00000602260 AKAP12Q02952 1782 aa16.27■□□□□ 0.2
ZNF544-219ENST00000602260 CPSF1Q10570 1443 aaKnown RBP16.27■□□□□ 0.19
ZNF544-219ENST00000602260 AATKQ6ZMQ8 1374 aa16.26■□□□□ 0.19
ZNF544-219ENST00000602260 WNK3Q9BYP7 1800 aa16.26■□□□□ 0.19
ZNF544-219ENST00000602260 PSDA5PKW4 1024 aaPredicted RBP16.26■□□□□ 0.19
ZNF544-219ENST00000602260 SLC24A1O60721 1099 aa16.26■□□□□ 0.19
ZNF544-219ENST00000602260 LARP1Q6PKG0 1096 aaKnown RBP16.26■□□□□ 0.19
ZNF544-219ENST00000602260 SLC12A5Q9H2X9 1139 aa16.26■□□□□ 0.19
ZNF544-219ENST00000602260 RGPD3A6NKT7 1758 aaPredicted RBP16.26■□□□□ 0.19
ZNF544-219ENST00000602260 RGPD4Q7Z3J3 1758 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms