RNA–Protein interactions for RNA: ENST00000602204.1

SIN3B-212, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 2

Gene SIN3B, Length 517 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-212ENST00000602204 NGDNQ8NEJ9 315 aaKnown RBP26.7■■□□□ 1.86
SIN3B-212ENST00000602204 MAP2P11137 1827 aaKnown RBP26.69■■□□□ 1.86
SIN3B-212ENST00000602204 TTC21BQ7Z4L5 1316 aa26.68■■□□□ 1.86
SIN3B-212ENST00000602204 CCDC184Q52MB2 194 aa26.68■■□□□ 1.86
SIN3B-212ENST00000602204 LTBP4Q8N2S1 1624 aa26.68■■□□□ 1.86
SIN3B-212ENST00000602204 SCAF1Q9H7N4 1312 aaKnown RBP26.67■■□□□ 1.86
SIN3B-212ENST00000602204 PIK3C2AO00443 1686 aa26.67■■□□□ 1.86
SIN3B-212ENST00000602204 PMFBP1Q8TBY8 1022 aa26.67■■□□□ 1.86
SIN3B-212ENST00000602204 TRPM3Q9HCF6 1732 aaPredicted RBP26.65■■□□□ 1.86
SIN3B-212ENST00000602204 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.64■■□□□ 1.86
SIN3B-212ENST00000602204 GGNBP2Q9H3C7 697 aa26.64■■□□□ 1.86
SIN3B-212ENST00000602204 MARF1Q9Y4F3 1742 aaKnown RBP26.64■■□□□ 1.85
SIN3B-212ENST00000602204 ESCO1Q5FWF5 840 aa26.63■■□□□ 1.85
SIN3B-212ENST00000602204 OVOS2A0A0J9YW53 1432 aa26.63■■□□□ 1.85
SIN3B-212ENST00000602204 OVOS2Q6IE36 1432 aa26.63■■□□□ 1.85
SIN3B-212ENST00000602204 USP31Q70CQ4 1352 aa26.62■■□□□ 1.85
SIN3B-212ENST00000602204 NME9Q86XW9 330 aa26.6■■□□□ 1.85
SIN3B-212ENST00000602204 INSRP06213 1382 aa26.59■■□□□ 1.85
SIN3B-212ENST00000602204 AATKQ6ZMQ8 1374 aa26.59■■□□□ 1.85
SIN3B-212ENST00000602204 PNISRQ8TF01 805 aaKnown RBP26.59■■□□□ 1.85
SIN3B-212ENST00000602204 COG3Q96JB2 828 aa26.59■■□□□ 1.85
SIN3B-212ENST00000602204 AEBP2Q6ZN18 517 aaPredicted RBP26.58■■□□□ 1.85
SIN3B-212ENST00000602204 ORAI2Q96SN7 254 aa26.57■■□□□ 1.84
SIN3B-212ENST00000602204 SHPRHQ149N8 1683 aa26.57■■□□□ 1.84
SIN3B-212ENST00000602204 ALS2Q96Q42 1657 aa26.57■■□□□ 1.84
SIN3B-212ENST00000602204 SMG6Q86US8 1419 aaKnown RBP26.56■■□□□ 1.84
SIN3B-212ENST00000602204 PSME1Q06323 249 aa26.53■■□□□ 1.84
SIN3B-212ENST00000602204 NHSL1Q5SYE7 1610 aa26.52■■□□□ 1.84
SIN3B-212ENST00000602204 FAM9BQ8IZU0 186 aa26.51■■□□□ 1.83
SIN3B-212ENST00000602204 CFAP53Q96M91 514 aa26.51■■□□□ 1.83
SIN3B-212ENST00000602204 NPHP3Q7Z494 1330 aa26.5■■□□□ 1.83
SIN3B-212ENST00000602204 TNNT2P45379 298 aaPredicted RBP26.5■■□□□ 1.83
SIN3B-212ENST00000602204 YTHDC1Q96MU7 727 aaKnown RBP26.5■■□□□ 1.83
SIN3B-212ENST00000602204 CDK12Q9NYV4 1490 aaPredicted RBP26.49■■□□□ 1.83
SIN3B-212ENST00000602204 MTHFSP49914 203 aa26.49■■□□□ 1.83
SIN3B-212ENST00000602204 COL3A1P02461 1466 aaPredicted RBP26.49■■□□□ 1.83
SIN3B-212ENST00000602204 SBNO1A3KN83 1393 aa26.48■■□□□ 1.83
SIN3B-212ENST00000602204 SLAIN2Q9P270 581 aa26.48■■□□□ 1.83
SIN3B-212ENST00000602204 ZRANB1Q9UGI0 708 aa26.48■■□□□ 1.83
SIN3B-212ENST00000602204 PNPLA6Q8IY17 1366 aa26.47■■□□□ 1.83
SIN3B-212ENST00000602204 FOXO3O43524 673 aa26.47■■□□□ 1.83
SIN3B-212ENST00000602204 PXDNQ92626 1479 aa26.47■■□□□ 1.83
SIN3B-212ENST00000602204 IQSEC2Q5JU85 1478 aa26.45■■□□□ 1.82
SIN3B-212ENST00000602204 KRT28Q7Z3Y7 464 aa26.45■■□□□ 1.82
SIN3B-212ENST00000602204 PHRF1Q9P1Y6 1649 aaKnown RBP26.45■■□□□ 1.82
SIN3B-212ENST00000602204 BLMP54132 1417 aaPredicted RBP26.45■■□□□ 1.82
SIN3B-212ENST00000602204 LTN1O94822 1766 aa26.45■■□□□ 1.82
SIN3B-212ENST00000602204 SLIT3O75094 1523 aa26.44■■□□□ 1.82
SIN3B-212ENST00000602204 BRINP3Q76B58 766 aa26.44■■□□□ 1.82
SIN3B-212ENST00000602204 ABTB2Q8N961 1025 aa26.44■■□□□ 1.82
SIN3B-212ENST00000602204 POLKQ9UBT6 870 aa26.44■■□□□ 1.82
SIN3B-212ENST00000602204 PAK3O75914 559 aaPredicted RBP26.43■■□□□ 1.82
SIN3B-212ENST00000602204 NLRP6P59044 892 aa26.43■■□□□ 1.82
SIN3B-212ENST00000602204 WDR43Q15061 677 aaKnown RBP eCLIP26.43■■□□□ 1.82
SIN3B-212ENST00000602204 PEAK1Q9H792 1746 aa26.42■■□□□ 1.82
SIN3B-212ENST00000602204 CRYBG1Q9Y4K1 1723 aa26.41■■□□□ 1.82
SIN3B-212ENST00000602204 KIF24Q5T7B8 1368 aa26.41■■□□□ 1.82
SIN3B-212ENST00000602204 MED1Q15648 1581 aaPredicted RBP26.41■■□□□ 1.82
SIN3B-212ENST00000602204 TNS3Q68CZ2 1445 aa26.4■■□□□ 1.82
SIN3B-212ENST00000602204 NFAT5O94916 1531 aa26.4■■□□□ 1.82
SIN3B-212ENST00000602204 CENPBP07199 599 aaPredicted RBP26.4■■□□□ 1.82
SIN3B-212ENST00000602204 ROBO1Q9Y6N7 1651 aa26.4■■□□□ 1.82
SIN3B-212ENST00000602204 AHDC1Q5TGY3 1603 aaPredicted RBP26.37■■□□□ 1.81
SIN3B-212ENST00000602204 USP19O94966 1318 aa26.37■■□□□ 1.81
SIN3B-212ENST00000602204 ARHGEF10O15013 1369 aa26.36■■□□□ 1.81
SIN3B-212ENST00000602204 HNRNPUQ00839 825 aaKnown RBP eCLIP26.36■■□□□ 1.81
SIN3B-212ENST00000602204 SOS2Q07890 1332 aaPredicted RBP26.36■■□□□ 1.81
SIN3B-212ENST00000602204 KCNH5Q8NCM2 988 aa26.35■■□□□ 1.81
SIN3B-212ENST00000602204 NUDCQ9Y266 331 aa26.35■■□□□ 1.81
SIN3B-212ENST00000602204 ADAMTS8Q9UP79 889 aa26.34■■□□□ 1.81
SIN3B-212ENST00000602204 EMILIN1Q9Y6C2 1016 aa26.34■■□□□ 1.81
SIN3B-212ENST00000602204 RTL1A6NKG5 1358 aa26.33■■□□□ 1.81
SIN3B-212ENST00000602204 XPCQ01831 940 aaPredicted RBP26.33■■□□□ 1.81
SIN3B-212ENST00000602204 SPATA31A3Q5VYP0 1347 aa26.33■■□□□ 1.81
SIN3B-212ENST00000602204 FLT4P35916 1363 aa26.33■■□□□ 1.8
SIN3B-212ENST00000602204 DIAPH1O60610 1272 aaKnown RBP26.32■■□□□ 1.8
SIN3B-212ENST00000602204 ZBED9Q6R2W3 1325 aa26.32■■□□□ 1.8
SIN3B-212ENST00000602204 RGPD1P0DJD0 1748 aa26.31■■□□□ 1.8
SIN3B-212ENST00000602204 RRS1Q15050 365 aaKnown RBP26.31■■□□□ 1.8
SIN3B-212ENST00000602204 FBLN1P23142 703 aa26.3■■□□□ 1.8
SIN3B-212ENST00000602204 MAP3K19Q56UN5 1328 aa26.3■■□□□ 1.8
SIN3B-212ENST00000602204 ABCA3Q99758 1704 aa26.3■■□□□ 1.8
SIN3B-212ENST00000602204 NUTM2GQ5VZR2 741 aa26.29■■□□□ 1.8
SIN3B-212ENST00000602204 ABCC6O95255 1503 aa26.29■■□□□ 1.8
SIN3B-212ENST00000602204 PPM1GO15355 546 aaPredicted RBP26.27■■□□□ 1.8
SIN3B-212ENST00000602204 DDX17Q92841 729 aaKnown RBP26.27■■□□□ 1.8
SIN3B-212ENST00000602204 TOM1O60784 492 aa26.24■■□□□ 1.79
SIN3B-212ENST00000602204 IL13P35225 146 aa26.24■■□□□ 1.79
SIN3B-212ENST00000602204 LMOD2Q6P5Q4 547 aa26.24■■□□□ 1.79
SIN3B-212ENST00000602204 NGEFQ8N5V2 710 aa26.24■■□□□ 1.79
SIN3B-212ENST00000602204 PHLPP1O60346 1717 aa26.24■■□□□ 1.79
SIN3B-212ENST00000602204 GCP02774 474 aa26.23■■□□□ 1.79
SIN3B-212ENST00000602204 PNNQ9H307 717 aaKnown RBP26.23■■□□□ 1.79
SIN3B-212ENST00000602204 COL22A1Q8NFW1 1626 aaPredicted RBP26.23■■□□□ 1.79
SIN3B-212ENST00000602204 U2AF1L5P0DN76 240 aaPredicted RBP26.22■■□□□ 1.79
SIN3B-212ENST00000602204 AMPHP49418 695 aa26.22■■□□□ 1.79
SIN3B-212ENST00000602204 U2AF1Q01081 240 aaKnown RBP eCLIP26.22■■□□□ 1.79
SIN3B-212ENST00000602204 COL18A1P39060 1754 aa26.21■■□□□ 1.79
SIN3B-212ENST00000602204 SOX12O15370 315 aa26.21■■□□□ 1.79
SIN3B-212ENST00000602204 RGPD5Q99666 1765 aa26.2■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms