RNA–Protein interactions for RNA: ENST00000602113.5

DDX49-213, Transcript of DEAD-box helicase 49, humanhuman

TSL 1 (best)

Gene DDX49, Length 1,691 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-213ENST00000602113 MORC1Q86VD1 984 aa23.7■■□□□ 1.38
DDX49-213ENST00000602113 TTC21BQ7Z4L5 1316 aa23.69■■□□□ 1.38
DDX49-213ENST00000602113 NLRP13Q86W25 1043 aa23.68■■□□□ 1.38
DDX49-213ENST00000602113 NME9Q86XW9 330 aa23.68■■□□□ 1.38
DDX49-213ENST00000602113 MRS2Q9HD23 443 aa23.68■■□□□ 1.38
DDX49-213ENST00000602113 KIF20BQ96Q89 1820 aa23.68■■□□□ 1.38
DDX49-213ENST00000602113 BRD4O60885 1362 aaPredicted RBP23.67■■□□□ 1.38
DDX49-213ENST00000602113 ZRANB1Q9UGI0 708 aa23.65■■□□□ 1.38
DDX49-213ENST00000602113 ANKRD26Q9UPS8 1709 aa23.65■■□□□ 1.38
DDX49-213ENST00000602113 TNNT2P45379 298 aaPredicted RBP23.64■■□□□ 1.37
DDX49-213ENST00000602113 KIF1AQ12756 1690 aa23.62■■□□□ 1.37
DDX49-213ENST00000602113 TTC21AQ8NDW8 1320 aa23.62■■□□□ 1.37
DDX49-213ENST00000602113 FOXO3O43524 673 aa23.61■■□□□ 1.37
DDX49-213ENST00000602113 PSME1Q06323 249 aa23.6■■□□□ 1.37
DDX49-213ENST00000602113 SLAIN2Q9P270 581 aa23.6■■□□□ 1.37
DDX49-213ENST00000602113 COG3Q96JB2 828 aa23.57■■□□□ 1.36
DDX49-213ENST00000602113 OVOS2A0A0J9YW53 1432 aa23.57■■□□□ 1.36
DDX49-213ENST00000602113 OVOS2Q6IE36 1432 aa23.57■■□□□ 1.36
DDX49-213ENST00000602113 XPCQ01831 940 aaPredicted RBP23.57■■□□□ 1.36
DDX49-213ENST00000602113 PIK3C2AO00443 1686 aa23.56■■□□□ 1.36
DDX49-213ENST00000602113 BRINP3Q76B58 766 aa23.56■■□□□ 1.36
DDX49-213ENST00000602113 PNISRQ8TF01 805 aaKnown RBP23.56■■□□□ 1.36
DDX49-213ENST00000602113 USP31Q70CQ4 1352 aa23.55■■□□□ 1.36
DDX49-213ENST00000602113 PAK3O75914 559 aaPredicted RBP23.55■■□□□ 1.36
DDX49-213ENST00000602113 YTHDC1Q96MU7 727 aaKnown RBP23.55■■□□□ 1.36
DDX49-213ENST00000602113 SCAF1Q9H7N4 1312 aaKnown RBP23.55■■□□□ 1.36
DDX49-213ENST00000602113 KRT28Q7Z3Y7 464 aa23.54■■□□□ 1.36
DDX49-213ENST00000602113 DDX17Q92841 729 aaKnown RBP23.54■■□□□ 1.36
DDX49-213ENST00000602113 FBLN1P23142 703 aa23.53■■□□□ 1.36
DDX49-213ENST00000602113 MTHFSP49914 203 aa23.53■■□□□ 1.36
DDX49-213ENST00000602113 FAM9BQ8IZU0 186 aa23.53■■□□□ 1.36
DDX49-213ENST00000602113 TRPM3Q9HCF6 1732 aaPredicted RBP23.52■■□□□ 1.36
DDX49-213ENST00000602113 ABTB2Q8N961 1025 aa23.51■■□□□ 1.35
DDX49-213ENST00000602113 NUTM2GQ5VZR2 741 aa23.51■■□□□ 1.35
DDX49-213ENST00000602113 NLRP6P59044 892 aa23.5■■□□□ 1.35
DDX49-213ENST00000602113 NPHP3Q7Z494 1330 aa23.5■■□□□ 1.35
DDX49-213ENST00000602113 AATKQ6ZMQ8 1374 aa23.5■■□□□ 1.35
DDX49-213ENST00000602113 MARF1Q9Y4F3 1742 aaKnown RBP23.48■■□□□ 1.35
DDX49-213ENST00000602113 USP54Q70EL1 1684 aa23.48■■□□□ 1.35
DDX49-213ENST00000602113 PXDNQ92626 1479 aa23.48■■□□□ 1.35
DDX49-213ENST00000602113 POLKQ9UBT6 870 aa23.48■■□□□ 1.35
DDX49-213ENST00000602113 SBNO1A3KN83 1393 aa23.45■■□□□ 1.35
DDX49-213ENST00000602113 EMILIN1Q9Y6C2 1016 aa23.44■■□□□ 1.34
DDX49-213ENST00000602113 SMG6Q86US8 1419 aaKnown RBP23.44■■□□□ 1.34
DDX49-213ENST00000602113 RRS1Q15050 365 aaKnown RBP23.44■■□□□ 1.34
DDX49-213ENST00000602113 ALS2Q96Q42 1657 aa23.43■■□□□ 1.34
DDX49-213ENST00000602113 CFAP53Q96M91 514 aa23.43■■□□□ 1.34
DDX49-213ENST00000602113 PNPLA6Q8IY17 1366 aa23.43■■□□□ 1.34
DDX49-213ENST00000602113 COL3A1P02461 1466 aaPredicted RBP23.42■■□□□ 1.34
DDX49-213ENST00000602113 SOX12O15370 315 aa23.42■■□□□ 1.34
DDX49-213ENST00000602113 MAP2P11137 1827 aaKnown RBP23.42■■□□□ 1.34
DDX49-213ENST00000602113 LMOD2Q6P5Q4 547 aa23.41■■□□□ 1.34
DDX49-213ENST00000602113 SOS2Q07890 1332 aaPredicted RBP23.41■■□□□ 1.34
DDX49-213ENST00000602113 PPM1GO15355 546 aaPredicted RBP23.41■■□□□ 1.34
DDX49-213ENST00000602113 TNS3Q68CZ2 1445 aa23.4■■□□□ 1.34
DDX49-213ENST00000602113 INSRP06213 1382 aa23.4■■□□□ 1.34
DDX49-213ENST00000602113 SHPRHQ149N8 1683 aa23.4■■□□□ 1.34
DDX49-213ENST00000602113 SPATA31A3Q5VYP0 1347 aa23.4■■□□□ 1.34
DDX49-213ENST00000602113 NHSL1Q5SYE7 1610 aa23.39■■□□□ 1.34
DDX49-213ENST00000602113 ADAMTS8Q9UP79 889 aa23.39■■□□□ 1.34
DDX49-213ENST00000602113 CDK12Q9NYV4 1490 aaPredicted RBP23.38■■□□□ 1.33
DDX49-213ENST00000602113 WDR43Q15061 677 aaKnown RBP eCLIP23.38■■□□□ 1.33
DDX49-213ENST00000602113 USP19O94966 1318 aa23.38■■□□□ 1.33
DDX49-213ENST00000602113 ROBO1Q9Y6N7 1651 aa23.38■■□□□ 1.33
DDX49-213ENST00000602113 MAP3K19Q56UN5 1328 aa23.37■■□□□ 1.33
DDX49-213ENST00000602113 SLIT3O75094 1523 aa23.37■■□□□ 1.33
DDX49-213ENST00000602113 NFAT5O94916 1531 aa23.36■■□□□ 1.33
DDX49-213ENST00000602113 PEAK1Q9H792 1746 aa23.36■■□□□ 1.33
DDX49-213ENST00000602113 IQSEC2Q5JU85 1478 aa23.35■■□□□ 1.33
DDX49-213ENST00000602113 MED1Q15648 1581 aaPredicted RBP23.34■■□□□ 1.33
DDX49-213ENST00000602113 TOM1O60784 492 aa23.34■■□□□ 1.33
DDX49-213ENST00000602113 PLEKHG5O94827 1062 aa23.34■■□□□ 1.33
DDX49-213ENST00000602113 HNRNPUQ00839 825 aaKnown RBP eCLIP23.34■■□□□ 1.33
DDX49-213ENST00000602113 KCNH5Q8NCM2 988 aa23.34■■□□□ 1.33
DDX49-213ENST00000602113 ARHGEF10O15013 1369 aa23.33■■□□□ 1.33
DDX49-213ENST00000602113 DIAPH1O60610 1272 aaKnown RBP23.33■■□□□ 1.33
DDX49-213ENST00000602113 GCP02774 474 aa23.33■■□□□ 1.33
DDX49-213ENST00000602113 BLMP54132 1417 aaPredicted RBP23.33■■□□□ 1.32
DDX49-213ENST00000602113 CERKQ8TCT0 537 aa23.32■■□□□ 1.32
DDX49-213ENST00000602113 AHDC1Q5TGY3 1603 aaPredicted RBP23.31■■□□□ 1.32
DDX49-213ENST00000602113 IL13P35225 146 aa23.3■■□□□ 1.32
DDX49-213ENST00000602113 HSP90AB2PQ58FF8 381 aa23.3■■□□□ 1.32
DDX49-213ENST00000602113 UBAP1LF5GYI3 381 aa23.29■■□□□ 1.32
DDX49-213ENST00000602113 FLT4P35916 1363 aa23.29■■□□□ 1.32
DDX49-213ENST00000602113 NUDCQ9Y266 331 aa23.29■■□□□ 1.32
DDX49-213ENST00000602113 AMPHP49418 695 aa23.28■■□□□ 1.32
DDX49-213ENST00000602113 PIP4K2BP78356 416 aa23.28■■□□□ 1.32
DDX49-213ENST00000602113 CABLES1Q8TDN4 633 aa23.28■■□□□ 1.32
DDX49-213ENST00000602113 KIF24Q5T7B8 1368 aa23.28■■□□□ 1.32
DDX49-213ENST00000602113 CRYBG1Q9Y4K1 1723 aa23.27■■□□□ 1.32
DDX49-213ENST00000602113 SENP3-EIF4A1A0A087X0R7 540 aa23.27■■□□□ 1.32
DDX49-213ENST00000602113 U2SURPO15042 1029 aaKnown RBP23.27■■□□□ 1.32
DDX49-213ENST00000602113 U2AF1L5P0DN76 240 aaPredicted RBP23.27■■□□□ 1.32
DDX49-213ENST00000602113 HOXC9P31274 260 aa23.27■■□□□ 1.32
DDX49-213ENST00000602113 U2AF1Q01081 240 aaKnown RBP eCLIP23.27■■□□□ 1.32
DDX49-213ENST00000602113 ARHGEF25Q86VW2 580 aa23.27■■□□□ 1.32
DDX49-213ENST00000602113 PHRF1Q9P1Y6 1649 aaKnown RBP23.26■■□□□ 1.31
DDX49-213ENST00000602113 EIF4A2Q14240 407 aaKnown RBP23.26■■□□□ 1.31
DDX49-213ENST00000602113 RTL1A6NKG5 1358 aa23.26■■□□□ 1.31
DDX49-213ENST00000602113 CCDC146Q8IYE0 955 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms