RNA–Protein interactions for RNA: ENST00000601614.6

SSBP4-211, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 628 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-211ENST00000601614 SPATA31A5Q5VU36 1347 aa23.99■■□□□ 1.43
SSBP4-211ENST00000601614 SPATA31A7Q8IWB4 1347 aa23.99■■□□□ 1.43
SSBP4-211ENST00000601614 EZH2Q15910 746 aaKnown RBP23.97■■□□□ 1.43
SSBP4-211ENST00000601614 PRR36Q9H6K5 1346 aa23.97■■□□□ 1.43
SSBP4-211ENST00000601614 ADGRB1O14514 1584 aa23.95■■□□□ 1.42
SSBP4-211ENST00000601614 HIRIP3Q9BW71 556 aaPredicted RBP23.94■■□□□ 1.42
SSBP4-211ENST00000601614 ACIN1Q9UKV3 1341 aaKnown RBP23.93■■□□□ 1.42
SSBP4-211ENST00000601614 POGKQ9P215 609 aa23.93■■□□□ 1.42
SSBP4-211ENST00000601614 RREB1Q92766 1687 aa23.92■■□□□ 1.42
SSBP4-211ENST00000601614 TULP4Q9NRJ4 1543 aa23.91■■□□□ 1.42
SSBP4-211ENST00000601614 CAMKK2Q96RR4 588 aa23.91■■□□□ 1.42
SSBP4-211ENST00000601614 GPRASP1Q5JY77 1395 aa23.91■■□□□ 1.42
SSBP4-211ENST00000601614 PHRF1Q9P1Y6 1649 aaKnown RBP23.9■■□□□ 1.42
SSBP4-211ENST00000601614 NUP188Q5SRE5 1749 aa23.9■■□□□ 1.42
SSBP4-211ENST00000601614 TRIM37O94972 964 aa23.89■■□□□ 1.41
SSBP4-211ENST00000601614 SPATA31A1Q5TZJ5 1347 aa23.88■■□□□ 1.41
SSBP4-211ENST00000601614 MINK1Q8N4C8 1332 aaPredicted RBP23.88■■□□□ 1.41
SSBP4-211ENST00000601614 PRDM11Q9NQV5 511 aa23.88■■□□□ 1.41
SSBP4-211ENST00000601614 TRAK1Q9UPV9 953 aa23.86■■□□□ 1.41
SSBP4-211ENST00000601614 CHRNA2Q15822 529 aa23.85■■□□□ 1.41
SSBP4-211ENST00000601614 KIAA0232Q92628 1395 aa23.85■■□□□ 1.41
SSBP4-211ENST00000601614 ITSN1Q15811 1721 aa23.84■■□□□ 1.41
SSBP4-211ENST00000601614 WASLO00401 505 aaPredicted RBP23.83■■□□□ 1.41
SSBP4-211ENST00000601614 PAK3O75914 559 aaPredicted RBP23.83■■□□□ 1.41
SSBP4-211ENST00000601614 FAM196AQ6ZSG2 479 aa23.83■■□□□ 1.41
SSBP4-211ENST00000601614 EIF3AQ14152 1382 aaKnown RBP23.82■■□□□ 1.4
SSBP4-211ENST00000601614 APBA3O96018 575 aa23.82■■□□□ 1.4
SSBP4-211ENST00000601614 NGDNQ8NEJ9 315 aaKnown RBP23.82■■□□□ 1.4
SSBP4-211ENST00000601614 STRN4Q9NRL3 753 aa23.81■■□□□ 1.4
SSBP4-211ENST00000601614 ATP7BP35670 1465 aa23.81■■□□□ 1.4
SSBP4-211ENST00000601614 PARD3Q8TEW0 1356 aa23.8■■□□□ 1.4
SSBP4-211ENST00000601614 ARHGEF28Q8N1W1 1705 aaKnown RBP23.8■■□□□ 1.4
SSBP4-211ENST00000601614 USP35Q9P2H5 1018 aa23.78■■□□□ 1.4
SSBP4-211ENST00000601614 ZC3H6P61129 1189 aaKnown RBP23.77■■□□□ 1.4
SSBP4-211ENST00000601614 SSH2Q76I76 1423 aa23.76■■□□□ 1.39
SSBP4-211ENST00000601614 YY1P25490 414 aa23.76■■□□□ 1.39
SSBP4-211ENST00000601614 NUTM2GQ5VZR2 741 aa23.76■■□□□ 1.39
SSBP4-211ENST00000601614 NRKQ7Z2Y5 1582 aa23.76■■□□□ 1.39
SSBP4-211ENST00000601614 LMO7Q8WWI1 1683 aa23.76■■□□□ 1.39
SSBP4-211ENST00000601614 CAMTA1Q9Y6Y1 1673 aa23.76■■□□□ 1.39
SSBP4-211ENST00000601614 TOPAZ1Q8N9V7 1692 aa23.75■■□□□ 1.39
SSBP4-211ENST00000601614 BARGINQ6ZT62 677 aa23.73■■□□□ 1.39
SSBP4-211ENST00000601614 NUDT16Q96DE0 195 aaKnown RBP23.72■■□□□ 1.39
SSBP4-211ENST00000601614 PARP4Q9UKK3 1724 aaKnown RBP23.71■■□□□ 1.39
SSBP4-211ENST00000601614 PDE3BQ13370 1112 aa23.71■■□□□ 1.39
SSBP4-211ENST00000601614 LARP1Q6PKG0 1096 aaKnown RBP23.71■■□□□ 1.39
SSBP4-211ENST00000601614 KDM2AQ9Y2K7 1162 aa23.71■■□□□ 1.39
SSBP4-211ENST00000601614 SBF2Q86WG5 1849 aa23.69■■□□□ 1.38
SSBP4-211ENST00000601614 POLR3AO14802 1390 aaPredicted RBP23.68■■□□□ 1.38
SSBP4-211ENST00000601614 PEAK1Q9H792 1746 aa23.68■■□□□ 1.38
SSBP4-211ENST00000601614 EVA1CP58658 441 aa23.67■■□□□ 1.38
SSBP4-211ENST00000601614 NBPF8Q3BBV2 869 aa23.67■■□□□ 1.38
SSBP4-211ENST00000601614 NBPF14Q5TI25 921 aa23.67■■□□□ 1.38
SSBP4-211ENST00000601614 TCP11L2Q8N4U5 519 aa23.66■■□□□ 1.38
SSBP4-211ENST00000601614 DCAF11Q8TEB1 546 aa23.66■■□□□ 1.38
SSBP4-211ENST00000601614 ACEP12821 1306 aa23.65■■□□□ 1.38
SSBP4-211ENST00000601614 SPON1Q9HCB6 807 aa23.65■■□□□ 1.38
SSBP4-211ENST00000601614 RGPD3A6NKT7 1758 aaPredicted RBP23.65■■□□□ 1.38
SSBP4-211ENST00000601614 RGPD4Q7Z3J3 1758 aa23.65■■□□□ 1.38
SSBP4-211ENST00000601614 CASZ1Q86V15 1759 aa23.65■■□□□ 1.38
SSBP4-211ENST00000601614 KCNQ2O43526 872 aa23.64■■□□□ 1.37
SSBP4-211ENST00000601614 CDK19Q9BWU1 502 aa23.64■■□□□ 1.37
SSBP4-211ENST00000601614 CPDO75976 1380 aa23.64■■□□□ 1.37
SSBP4-211ENST00000601614 NINLQ9Y2I6 1382 aa23.63■■□□□ 1.37
SSBP4-211ENST00000601614 COL5A2P05997 1499 aaPredicted RBP23.62■■□□□ 1.37
SSBP4-211ENST00000601614 USP19O94966 1318 aa23.62■■□□□ 1.37
SSBP4-211ENST00000601614 PPP1R1BQ9UD71 204 aaPredicted RBP23.62■■□□□ 1.37
SSBP4-211ENST00000601614 LRRC37A3O60309 1634 aa23.62■■□□□ 1.37
SSBP4-211ENST00000601614 ABTB2Q8N961 1025 aa23.6■■□□□ 1.37
SSBP4-211ENST00000601614 RAB3GAP2Q9H2M9 1393 aa23.6■■□□□ 1.37
SSBP4-211ENST00000601614 ANO8Q9HCE9 1232 aaPredicted RBP23.59■■□□□ 1.37
SSBP4-211ENST00000601614 THRAP3Q9Y2W1 955 aaKnown RBP23.59■■□□□ 1.37
SSBP4-211ENST00000601614 PLEKHG3A1L390 1219 aa23.58■■□□□ 1.37
SSBP4-211ENST00000601614 CCDC61Q9Y6R9 512 aa23.58■■□□□ 1.37
SSBP4-211ENST00000601614 WNK3Q9BYP7 1800 aa23.58■■□□□ 1.37
SSBP4-211ENST00000601614 PTF1AQ7RTS3 328 aa23.57■■□□□ 1.36
SSBP4-211ENST00000601614 PDGFDQ9GZP0 370 aaPredicted RBP23.57■■□□□ 1.36
SSBP4-211ENST00000601614 OVOS2A0A0G2JMS6 1433 aa23.57■■□□□ 1.36
SSBP4-211ENST00000601614 OVOS2A0A0J9YW53 1432 aa23.57■■□□□ 1.36
SSBP4-211ENST00000601614 OVOS2Q6IE36 1432 aa23.57■■□□□ 1.36
SSBP4-211ENST00000601614 MYOM1P52179 1685 aa23.56■■□□□ 1.36
SSBP4-211ENST00000601614 GCP02774 474 aa23.55■■□□□ 1.36
SSBP4-211ENST00000601614 CRB1P82279 1406 aa23.55■■□□□ 1.36
SSBP4-211ENST00000601614 COL18A1P39060 1754 aa23.53■■□□□ 1.36
SSBP4-211ENST00000601614 PLSCR1O15162 318 aa23.52■■□□□ 1.36
SSBP4-211ENST00000601614 STAC3Q96MF2 364 aa23.52■■□□□ 1.36
SSBP4-211ENST00000601614 AKAP12Q02952 1782 aa23.52■■□□□ 1.36
SSBP4-211ENST00000601614 NLRP13Q86W25 1043 aa23.51■■□□□ 1.35
SSBP4-211ENST00000601614 KIAA1210Q9ULL0 1709 aa23.5■■□□□ 1.35
SSBP4-211ENST00000601614 PROM2Q8N271 834 aa23.5■■□□□ 1.35
SSBP4-211ENST00000601614 RGPD5Q99666 1765 aa23.5■■□□□ 1.35
SSBP4-211ENST00000601614 PPIP5K1Q6PFW1 1433 aa23.5■■□□□ 1.35
SSBP4-211ENST00000601614 SLIT3O75094 1523 aa23.49■■□□□ 1.35
SSBP4-211ENST00000601614 DCAF8L1A6NGE4 600 aa23.49■■□□□ 1.35
SSBP4-211ENST00000601614 ZBTB7CA1YPR0 619 aa23.48■■□□□ 1.35
SSBP4-211ENST00000601614 C11orf95C9JLR9 678 aaPredicted RBP23.48■■□□□ 1.35
SSBP4-211ENST00000601614 ZBTB7AO95365 584 aa23.47■■□□□ 1.35
SSBP4-211ENST00000601614 PTGER2P43116 358 aa23.47■■□□□ 1.35
SSBP4-211ENST00000601614 DDB1Q16531 1140 aa23.47■■□□□ 1.35
SSBP4-211ENST00000601614 PIK3C2AO00443 1686 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms