RNA–Protein interactions for RNA: ENST00000601373.5

IRF3-229, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-229ENST00000601373 HNRNPUQ00839 825 aaKnown RBP eCLIP18.38■□□□□ 0.532e-8■□□□□ 8.3
IRF3-229ENST00000601373 NCOA3Q9Y6Q9 1424 aa18.38■□□□□ 0.53
IRF3-229ENST00000601373 FMN2Q9NZ56 1722 aa18.37■□□□□ 0.53
IRF3-229ENST00000601373 AKAP12Q02952 1782 aa18.37■□□□□ 0.53
IRF3-229ENST00000601373 NUTM2FA1L443 756 aa18.37■□□□□ 0.53
IRF3-229ENST00000601373 C14orf37Q86TY3 774 aa18.37■□□□□ 0.53
IRF3-229ENST00000601373 ACEP12821 1306 aa18.37■□□□□ 0.53
IRF3-229ENST00000601373 MON2Q7Z3U7 1717 aa18.37■□□□□ 0.53
IRF3-229ENST00000601373 POLR3AO14802 1390 aaPredicted RBP18.36■□□□□ 0.53
IRF3-229ENST00000601373 NALCNQ8IZF0 1738 aa18.36■□□□□ 0.53
IRF3-229ENST00000601373 GGNBP2Q9H3C7 697 aa18.36■□□□□ 0.53
IRF3-229ENST00000601373 ANKRD26Q9UPS8 1709 aa18.36■□□□□ 0.53
IRF3-229ENST00000601373 SPATA31A6Q5VVP1 1343 aa18.35■□□□□ 0.53
IRF3-229ENST00000601373 KIF20BQ96Q89 1820 aa18.35■□□□□ 0.53
IRF3-229ENST00000601373 ZNF772Q68DY9 489 aaPredicted RBP18.34■□□□□ 0.53
IRF3-229ENST00000601373 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.34■□□□□ 0.53
IRF3-229ENST00000601373 NGDNQ8NEJ9 315 aaKnown RBP18.34■□□□□ 0.53
IRF3-229ENST00000601373 WDR43Q15061 677 aaKnown RBP eCLIP18.33■□□□□ 0.52
IRF3-229ENST00000601373 CFAP53Q96M91 514 aa18.33■□□□□ 0.52
IRF3-229ENST00000601373 C19orf44Q9H6X5 657 aa18.33■□□□□ 0.52
IRF3-229ENST00000601373 USP6P35125 1406 aa18.32■□□□□ 0.52
IRF3-229ENST00000601373 PHLPP1O60346 1717 aa18.32■□□□□ 0.52
IRF3-229ENST00000601373 TTC21BQ7Z4L5 1316 aa18.32■□□□□ 0.52
IRF3-229ENST00000601373 RBM33Q96EV2 1170 aaKnown RBP18.32■□□□□ 0.52
IRF3-229ENST00000601373 TTC21AQ8NDW8 1320 aa18.31■□□□□ 0.52
IRF3-229ENST00000601373 TNNT2P45379 298 aaPredicted RBP18.31■□□□□ 0.52
IRF3-229ENST00000601373 PMFBP1Q8TBY8 1022 aa18.31■□□□□ 0.52
IRF3-229ENST00000601373 RGPD8O14715 1765 aaPredicted RBP18.3■□□□□ 0.52
IRF3-229ENST00000601373 ZBED9Q6R2W3 1325 aa18.3■□□□□ 0.52
IRF3-229ENST00000601373 MTHFSP49914 203 aa18.3■□□□□ 0.52
IRF3-229ENST00000601373 COG3Q96JB2 828 aa18.3■□□□□ 0.52
IRF3-229ENST00000601373 PHF8Q9UPP1 1060 aa18.3■□□□□ 0.52
IRF3-229ENST00000601373 CADPS2Q86UW7 1296 aa18.29■□□□□ 0.52
IRF3-229ENST00000601373 NME9Q86XW9 330 aa18.29■□□□□ 0.52
IRF3-229ENST00000601373 SSH2Q76I76 1423 aa18.29■□□□□ 0.52
IRF3-229ENST00000601373 DCCP43146 1447 aa18.28■□□□□ 0.52
IRF3-229ENST00000601373 MEX3CQ5U5Q3 659 aaKnown RBP18.27■□□□□ 0.52
IRF3-229ENST00000601373 AATKQ6ZMQ8 1374 aa18.27■□□□□ 0.51
IRF3-229ENST00000601373 COL16A1Q07092 1604 aaPredicted RBP18.27■□□□□ 0.51
IRF3-229ENST00000601373 NRKQ7Z2Y5 1582 aa18.26■□□□□ 0.51
IRF3-229ENST00000601373 ATF3P18847 181 aa18.26■□□□□ 0.51
IRF3-229ENST00000601373 ADAMTS8Q9UP79 889 aa18.26■□□□□ 0.51
IRF3-229ENST00000601373 BLMP54132 1417 aaPredicted RBP18.25■□□□□ 0.51
IRF3-229ENST00000601373 ESCO1Q5FWF5 840 aa18.25■□□□□ 0.51
IRF3-229ENST00000601373 UPF1Q92900 1129 aaKnown RBP eCLIP18.25■□□□□ 0.51
IRF3-229ENST00000601373 USP31Q70CQ4 1352 aa18.24■□□□□ 0.51
IRF3-229ENST00000601373 NUDCQ9Y266 331 aa18.23■□□□□ 0.51
IRF3-229ENST00000601373 AHDC1Q5TGY3 1603 aaPredicted RBP18.23■□□□□ 0.51
IRF3-229ENST00000601373 RXRBP28702 533 aa18.22■□□□□ 0.51
IRF3-229ENST00000601373 C1orf167Q5SNV9 1468 aa18.21■□□□□ 0.51
IRF3-229ENST00000601373 CDK12Q9NYV4 1490 aaPredicted RBP18.21■□□□□ 0.51
IRF3-229ENST00000601373 LRP6O75581 1613 aa18.21■□□□□ 0.51
IRF3-229ENST00000601373 PSME1Q06323 249 aa18.21■□□□□ 0.51
IRF3-229ENST00000601373 POLKQ9UBT6 870 aa18.21■□□□□ 0.51
IRF3-229ENST00000601373 ZRANB1Q9UGI0 708 aa18.21■□□□□ 0.51
IRF3-229ENST00000601373 OVOS2A0A0J9YW53 1432 aa18.21■□□□□ 0.51
IRF3-229ENST00000601373 OVOS2Q6IE36 1432 aa18.21■□□□□ 0.51
IRF3-229ENST00000601373 PNPLA6Q8IY17 1366 aa18.2■□□□□ 0.5
IRF3-229ENST00000601373 SHPRHQ149N8 1683 aa18.19■□□□□ 0.5
IRF3-229ENST00000601373 NGEFQ8N5V2 710 aa18.19■□□□□ 0.5
IRF3-229ENST00000601373 KIF1AQ12756 1690 aa18.18■□□□□ 0.5
IRF3-229ENST00000601373 SMG6Q86US8 1419 aaKnown RBP18.18■□□□□ 0.5
IRF3-229ENST00000601373 ORAI2Q96SN7 254 aa18.18■□□□□ 0.5
IRF3-229ENST00000601373 MST1RQ04912 1400 aa18.17■□□□□ 0.5
IRF3-229ENST00000601373 MAP2P11137 1827 aaKnown RBP18.17■□□□□ 0.5
IRF3-229ENST00000601373 DIAPH1O60610 1272 aaKnown RBP18.17■□□□□ 0.5
IRF3-229ENST00000601373 COL3A1P02461 1466 aaPredicted RBP18.16■□□□□ 0.5
IRF3-229ENST00000601373 ADRA2BP18089 450 aa18.16■□□□□ 0.5
IRF3-229ENST00000601373 NLRP6P59044 892 aa18.16■□□□□ 0.5
IRF3-229ENST00000601373 PDE3BQ13370 1112 aa18.16■□□□□ 0.5
IRF3-229ENST00000601373 ABTB2Q8N961 1025 aa18.16■□□□□ 0.5
IRF3-229ENST00000601373 PAK3O75914 559 aaPredicted RBP18.15■□□□□ 0.5
IRF3-229ENST00000601373 PNNQ9H307 717 aaKnown RBP18.15■□□□□ 0.5
IRF3-229ENST00000601373 PPM1GO15355 546 aaPredicted RBP18.14■□□□□ 0.49
IRF3-229ENST00000601373 BRINP3Q76B58 766 aa18.14■□□□□ 0.49
IRF3-229ENST00000601373 USP54Q70EL1 1684 aa18.14■□□□□ 0.49
IRF3-229ENST00000601373 FOXO3O43524 673 aa18.13■□□□□ 0.49
IRF3-229ENST00000601373 U2AF1L5P0DN76 240 aaPredicted RBP18.13■□□□□ 0.49
IRF3-229ENST00000601373 U2AF1Q01081 240 aaKnown RBP eCLIP18.13■□□□□ 0.49
IRF3-229ENST00000601373 RUNDC1Q96C34 613 aa18.13■□□□□ 0.49
IRF3-229ENST00000601373 EMILIN1Q9Y6C2 1016 aa18.13■□□□□ 0.49
IRF3-229ENST00000601373 PIK3C2AO00443 1686 aa18.12■□□□□ 0.49
IRF3-229ENST00000601373 FBLN1P23142 703 aa18.12■□□□□ 0.49
IRF3-229ENST00000601373 NCBP3Q53F19 620 aaKnown RBP18.12■□□□□ 0.49
IRF3-229ENST00000601373 KRT28Q7Z3Y7 464 aa18.12■□□□□ 0.49
IRF3-229ENST00000601373 RRS1Q15050 365 aaKnown RBP18.11■□□□□ 0.49
IRF3-229ENST00000601373 LRRC59Q96AG4 307 aaKnown RBP18.11■□□□□ 0.49
IRF3-229ENST00000601373 KIF24Q5T7B8 1368 aa18.1■□□□□ 0.49
IRF3-229ENST00000601373 U2SURPO15042 1029 aaKnown RBP18.1■□□□□ 0.49
IRF3-229ENST00000601373 CCDC146Q8IYE0 955 aa18.1■□□□□ 0.49
IRF3-229ENST00000601373 AFF2P51816 1311 aa18.09■□□□□ 0.49
IRF3-229ENST00000601373 NPHP3Q7Z494 1330 aa18.09■□□□□ 0.49
IRF3-229ENST00000601373 NUTM2BA6NNL0 878 aaPredicted RBP18.09■□□□□ 0.49
IRF3-229ENST00000601373 NUTM2EB1AL46 878 aaPredicted RBP18.09■□□□□ 0.49
IRF3-229ENST00000601373 APAF1O14727 1248 aa18.09■□□□□ 0.49
IRF3-229ENST00000601373 NUTM2AQ8IVF1 878 aaPredicted RBP18.09■□□□□ 0.49
IRF3-229ENST00000601373 KCNH5Q8NCM2 988 aa18.09■□□□□ 0.49
IRF3-229ENST00000601373 FCHSD2O94868 740 aa18.08■□□□□ 0.48
IRF3-229ENST00000601373 IL13P35225 146 aa18.08■□□□□ 0.48
IRF3-229ENST00000601373 SBNO1A3KN83 1393 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms