RNA–Protein interactions for RNA: ENST00000601154.1

CCDC9-206, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 454 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-206ENST00000601154 ONECUT3O60422 494 aaPredicted RBP12.21□□□□□ -0.45
CCDC9-206ENST00000601154 FAM182BQ5T319 152 aa12.21□□□□□ -0.45
CCDC9-206ENST00000601154 PSDA5PKW4 1024 aaPredicted RBP12.2□□□□□ -0.46
CCDC9-206ENST00000601154 PRDM11Q9NQV5 511 aa12.2□□□□□ -0.46
CCDC9-206ENST00000601154 NRAPQ86VF7 1730 aa12.2□□□□□ -0.46
CCDC9-206ENST00000601154 BAG6P46379 1132 aa12.19□□□□□ -0.46
CCDC9-206ENST00000601154 ALS2Q96Q42 1657 aa12.19□□□□□ -0.46
CCDC9-206ENST00000601154 COL14A1Q05707 1796 aaKnown RBP12.18□□□□□ -0.46
CCDC9-206ENST00000601154 CHRNA2Q15822 529 aa12.18□□□□□ -0.46
CCDC9-206ENST00000601154 NUTM2GQ5VZR2 741 aa12.18□□□□□ -0.46
CCDC9-206ENST00000601154 ATP7BP35670 1465 aa12.18□□□□□ -0.46
CCDC9-206ENST00000601154 SPATA31A5Q5VU36 1347 aa12.17□□□□□ -0.46
CCDC9-206ENST00000601154 SPATA31A7Q8IWB4 1347 aa12.17□□□□□ -0.46
CCDC9-206ENST00000601154 NUDT16Q96DE0 195 aaKnown RBP12.17□□□□□ -0.46
CCDC9-206ENST00000601154 STRN4Q9NRL3 753 aa12.17□□□□□ -0.46
CCDC9-206ENST00000601154 KIAA0232Q92628 1395 aa12.17□□□□□ -0.46
CCDC9-206ENST00000601154 ZC3H6P61129 1189 aaKnown RBP12.16□□□□□ -0.46
CCDC9-206ENST00000601154 EN1Q05925 392 aaPredicted RBP12.16□□□□□ -0.46
CCDC9-206ENST00000601154 CDK19Q9BWU1 502 aa12.15□□□□□ -0.46
CCDC9-206ENST00000601154 USP35Q9P2H5 1018 aa12.15□□□□□ -0.46
CCDC9-206ENST00000601154 ARHGEF28Q8N1W1 1705 aaKnown RBP12.14□□□□□ -0.47
CCDC9-206ENST00000601154 CRYBG1Q9Y4K1 1723 aa12.14□□□□□ -0.47
CCDC9-206ENST00000601154 STAC3Q96MF2 364 aa12.13□□□□□ -0.47
CCDC9-206ENST00000601154 THSD7AQ9UPZ6 1657 aa12.13□□□□□ -0.47
CCDC9-206ENST00000601154 ACEP12821 1306 aa12.12□□□□□ -0.47
CCDC9-206ENST00000601154 SPATA31A1Q5TZJ5 1347 aa12.12□□□□□ -0.47
CCDC9-206ENST00000601154 HRCP23327 699 aa12.12□□□□□ -0.47
CCDC9-206ENST00000601154 R3HDM1Q15032 1099 aaKnown RBP12.12□□□□□ -0.47
CCDC9-206ENST00000601154 PHRF1Q9P1Y6 1649 aaKnown RBP12.11□□□□□ -0.47
CCDC9-206ENST00000601154 ITSN1Q15811 1721 aa12.11□□□□□ -0.47
CCDC9-206ENST00000601154 TRIM37O94972 964 aa12.11□□□□□ -0.47
CCDC9-206ENST00000601154 EZH2Q15910 746 aaKnown RBP12.11□□□□□ -0.47
CCDC9-206ENST00000601154 NBPF8Q3BBV2 869 aa12.11□□□□□ -0.47
CCDC9-206ENST00000601154 LRP5O75197 1615 aa12.11□□□□□ -0.47
CCDC9-206ENST00000601154 POLR3AO14802 1390 aaPredicted RBP12.1□□□□□ -0.47
CCDC9-206ENST00000601154 EVA1CP58658 441 aa12.1□□□□□ -0.47
CCDC9-206ENST00000601154 SRPK2P78362 688 aaKnown RBP12.1□□□□□ -0.47
CCDC9-206ENST00000601154 NBPF1Q3BBV0 1214 aa12.1□□□□□ -0.47
CCDC9-206ENST00000601154 ABTB2Q8N961 1025 aa12.1□□□□□ -0.47
CCDC9-206ENST00000601154 CCDC61Q9Y6R9 512 aa12.1□□□□□ -0.47
CCDC9-206ENST00000601154 RGPD1P0DJD0 1748 aa12.1□□□□□ -0.47
CCDC9-206ENST00000601154 SSH2Q76I76 1423 aa12.1□□□□□ -0.47
CCDC9-206ENST00000601154 ZBTB7CA1YPR0 619 aa12.09□□□□□ -0.47
CCDC9-206ENST00000601154 TOPAZ1Q8N9V7 1692 aa12.09□□□□□ -0.47
CCDC9-206ENST00000601154 NRKQ7Z2Y5 1582 aa12.09□□□□□ -0.47
CCDC9-206ENST00000601154 APBA3O96018 575 aa12.08□□□□□ -0.48
CCDC9-206ENST00000601154 LARP1Q6PKG0 1096 aaKnown RBP12.08□□□□□ -0.48
CCDC9-206ENST00000601154 FAM196AQ6ZSG2 479 aa12.08□□□□□ -0.48
CCDC9-206ENST00000601154 CABP2Q9NPB3 220 aa12.08□□□□□ -0.48
CCDC9-206ENST00000601154 PPIP5K1Q6PFW1 1433 aa12.08□□□□□ -0.48
CCDC9-206ENST00000601154 TNS1Q9HBL0 1735 aaKnown RBP12.08□□□□□ -0.48
CCDC9-206ENST00000601154 PLEKHG3A1L390 1219 aa12.07□□□□□ -0.48
CCDC9-206ENST00000601154 DISP2A7MBM2 1401 aa12.07□□□□□ -0.48
CCDC9-206ENST00000601154 PDE3BQ13370 1112 aa12.07□□□□□ -0.48
CCDC9-206ENST00000601154 CAMTA1Q9Y6Y1 1673 aa12.06□□□□□ -0.48
CCDC9-206ENST00000601154 CAMKK2Q96RR4 588 aa12.06□□□□□ -0.48
CCDC9-206ENST00000601154 USP19O94966 1318 aa12.06□□□□□ -0.48
CCDC9-206ENST00000601154 CENPJQ9HC77 1338 aaPredicted RBP12.06□□□□□ -0.48
CCDC9-206ENST00000601154 BARGINQ6ZT62 677 aa12.05□□□□□ -0.48
CCDC9-206ENST00000601154 NLRP13Q86W25 1043 aa12.05□□□□□ -0.48
CCDC9-206ENST00000601154 TCP11L2Q8N4U5 519 aa12.05□□□□□ -0.48
CCDC9-206ENST00000601154 CPDO75976 1380 aa12.05□□□□□ -0.48
CCDC9-206ENST00000601154 GCP02774 474 aa12.04□□□□□ -0.48
CCDC9-206ENST00000601154 KIAA1210Q9ULL0 1709 aa12.03□□□□□ -0.48
CCDC9-206ENST00000601154 LMO7Q8WWI1 1683 aa12.03□□□□□ -0.48
CCDC9-206ENST00000601154 COL5A2P05997 1499 aaPredicted RBP12.02□□□□□ -0.48
CCDC9-206ENST00000601154 NLRP6P59044 892 aa12.02□□□□□ -0.49
CCDC9-206ENST00000601154 CABP1Q9NZU7 370 aa12.02□□□□□ -0.49
CCDC9-206ENST00000601154 PARD3Q8TEW0 1356 aa12.02□□□□□ -0.49
CCDC9-206ENST00000601154 USP6P35125 1406 aa12.02□□□□□ -0.49
CCDC9-206ENST00000601154 QRICH2Q9H0J4 1663 aa12□□□□□ -0.49
CCDC9-206ENST00000601154 SOX12O15370 315 aa12□□□□□ -0.49
CCDC9-206ENST00000601154 THRAP3Q9Y2W1 955 aaKnown RBP12□□□□□ -0.49
CCDC9-206ENST00000601154 CRB1P82279 1406 aa12□□□□□ -0.49
CCDC9-206ENST00000601154 NBPF14Q5TI25 921 aa11.99□□□□□ -0.49
CCDC9-206ENST00000601154 TOM1L2Q6ZVM7 507 aa11.99□□□□□ -0.49
CCDC9-206ENST00000601154 L3MBTL2Q969R5 705 aa11.99□□□□□ -0.49
CCDC9-206ENST00000601154 SLIT3O75094 1523 aa11.98□□□□□ -0.49
CCDC9-206ENST00000601154 OVOS2A0A0G2JMS6 1433 aa11.98□□□□□ -0.49
CCDC9-206ENST00000601154 OVOS2A0A0J9YW53 1432 aa11.98□□□□□ -0.49
CCDC9-206ENST00000601154 OVOS2Q6IE36 1432 aa11.98□□□□□ -0.49
CCDC9-206ENST00000601154 BRD4O60885 1362 aaPredicted RBP11.98□□□□□ -0.49
CCDC9-206ENST00000601154 NUP188Q5SRE5 1749 aa11.97□□□□□ -0.49
CCDC9-206ENST00000601154 RREB1Q92766 1687 aa11.97□□□□□ -0.49
CCDC9-206ENST00000601154 AATKQ6ZMQ8 1374 aa11.97□□□□□ -0.49
CCDC9-206ENST00000601154 EVC2Q86UK5 1308 aa11.97□□□□□ -0.49
CCDC9-206ENST00000601154 DDB1Q16531 1140 aa11.97□□□□□ -0.49
CCDC9-206ENST00000601154 SIN3AQ96ST3 1273 aa11.97□□□□□ -0.49
CCDC9-206ENST00000601154 NEUROD1Q13562 356 aa11.96□□□□□ -0.49
CCDC9-206ENST00000601154 AXIN2Q9Y2T1 843 aa11.96□□□□□ -0.49
CCDC9-206ENST00000601154 PARP4Q9UKK3 1724 aaKnown RBP11.96□□□□□ -0.49
CCDC9-206ENST00000601154 PIK3C2AO00443 1686 aa11.96□□□□□ -0.5
CCDC9-206ENST00000601154 LRRC37A3O60309 1634 aa11.96□□□□□ -0.5
CCDC9-206ENST00000601154 CPSF1Q10570 1443 aaKnown RBP11.95□□□□□ -0.5
CCDC9-206ENST00000601154 ROCK2O75116 1388 aaKnown RBP11.95□□□□□ -0.5
CCDC9-206ENST00000601154 CSB-PGBD3P0DP91 1061 aa11.95□□□□□ -0.5
CCDC9-206ENST00000601154 PTF1AQ7RTS3 328 aa11.95□□□□□ -0.5
CCDC9-206ENST00000601154 PPP1R1BQ9UD71 204 aaPredicted RBP11.95□□□□□ -0.5
CCDC9-206ENST00000601154 TTC21BQ7Z4L5 1316 aa11.94□□□□□ -0.5
CCDC9-206ENST00000601154 WDR17Q8IZU2 1322 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms