RNA–Protein interactions for RNA: ENST00000600940.1

USP29-204, Transcript of ubiquitin specific peptidase 29, humanhuman

TSL 4

Gene USP29, Length 533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP29-204ENST00000600940 ABCA3Q99758 1704 aa20.14■□□□□ 0.81
USP29-204ENST00000600940 NWD2Q9ULI1 1742 aa20.14■□□□□ 0.81
USP29-204ENST00000600940 BTG4Q9NY30 223 aa20.14■□□□□ 0.81
USP29-204ENST00000600940 KCNA4P22459 653 aa20.13■□□□□ 0.81
USP29-204ENST00000600940 BRWD3Q6RI45 1802 aa20.13■□□□□ 0.81
USP29-204ENST00000600940 KRT27Q7Z3Y8 459 aa20.12■□□□□ 0.81
USP29-204ENST00000600940 NUDT16Q96DE0 195 aaKnown RBP20.12■□□□□ 0.81
USP29-204ENST00000600940 BLMP54132 1417 aaPredicted RBP20.11■□□□□ 0.81
USP29-204ENST00000600940 TRPM3Q9HCF6 1732 aaPredicted RBP20.1■□□□□ 0.81
USP29-204ENST00000600940 FAM98CQ17RN3 349 aaKnown RBP20.1■□□□□ 0.81
USP29-204ENST00000600940 CDK19Q9BWU1 502 aa20.1■□□□□ 0.81
USP29-204ENST00000600940 PRDM11Q9NQV5 511 aa20.09■□□□□ 0.81
USP29-204ENST00000600940 ARHGEF28Q8N1W1 1705 aaKnown RBP20.09■□□□□ 0.81
USP29-204ENST00000600940 SRCAPQ6ZRS2 3230 aa20.09■□□□□ 0.81
USP29-204ENST00000600940 ITSN1Q15811 1721 aa20.08■□□□□ 0.81
USP29-204ENST00000600940 ALS2Q96Q42 1657 aa20.07■□□□□ 0.8
USP29-204ENST00000600940 DEFB132Q7Z7B7 95 aa20.07■□□□□ 0.8
USP29-204ENST00000600940 RNF216Q9NWF9 866 aaPredicted RBP20.07■□□□□ 0.8
USP29-204ENST00000600940 COL14A1Q05707 1796 aaKnown RBP20.06■□□□□ 0.8
USP29-204ENST00000600940 ONECUT3O60422 494 aaPredicted RBP20.06■□□□□ 0.8
USP29-204ENST00000600940 NUTM2GQ5VZR2 741 aa20.06■□□□□ 0.8
USP29-204ENST00000600940 HOXD11P31277 338 aaPredicted RBP20.04■□□□□ 0.8
USP29-204ENST00000600940 SRPK2P78362 688 aaKnown RBP20.03■□□□□ 0.8
USP29-204ENST00000600940 STRN4Q9NRL3 753 aa20.03■□□□□ 0.8
USP29-204ENST00000600940 CCDC61Q9Y6R9 512 aa20.03■□□□□ 0.8
USP29-204ENST00000600940 ATP7BP35670 1465 aa20.03■□□□□ 0.8
USP29-204ENST00000600940 ACEP12821 1306 aa20.02■□□□□ 0.8
USP29-204ENST00000600940 ZC3H6P61129 1189 aaKnown RBP20.02■□□□□ 0.8
USP29-204ENST00000600940 CHRNA2Q15822 529 aa20.02■□□□□ 0.8
USP29-204ENST00000600940 NBPF1Q3BBV0 1214 aa20.02■□□□□ 0.8
USP29-204ENST00000600940 NRAPQ86VF7 1730 aa20.02■□□□□ 0.79
USP29-204ENST00000600940 BAG6P46379 1132 aa20.01■□□□□ 0.79
USP29-204ENST00000600940 EVA1CP58658 441 aa20.01■□□□□ 0.79
USP29-204ENST00000600940 NBPF8Q3BBV2 869 aa20.01■□□□□ 0.79
USP29-204ENST00000600940 SPATA31A5Q5VU36 1347 aa20.01■□□□□ 0.79
USP29-204ENST00000600940 SPATA31A7Q8IWB4 1347 aa20.01■□□□□ 0.79
USP29-204ENST00000600940 KIAA0232Q92628 1395 aa20■□□□□ 0.79
USP29-204ENST00000600940 KIAA1210Q9ULL0 1709 aa20■□□□□ 0.79
USP29-204ENST00000600940 ABTB2Q8N961 1025 aa20■□□□□ 0.79
USP29-204ENST00000600940 FAM182BQ5T319 152 aa19.99■□□□□ 0.79
USP29-204ENST00000600940 NPM3O75607 178 aaKnown RBP19.98■□□□□ 0.79
USP29-204ENST00000600940 USP35Q9P2H5 1018 aa19.98■□□□□ 0.79
USP29-204ENST00000600940 CENPJQ9HC77 1338 aaPredicted RBP19.98■□□□□ 0.79
USP29-204ENST00000600940 CRYBG1Q9Y4K1 1723 aa19.96■□□□□ 0.79
USP29-204ENST00000600940 PLEKHG3A1L390 1219 aa19.96■□□□□ 0.79
USP29-204ENST00000600940 CABP2Q9NPB3 220 aa19.96■□□□□ 0.79
USP29-204ENST00000600940 POLR3AO14802 1390 aaPredicted RBP19.95■□□□□ 0.79
USP29-204ENST00000600940 ZBTB7CA1YPR0 619 aa19.94■□□□□ 0.78
USP29-204ENST00000600940 SPATA31A1Q5TZJ5 1347 aa19.94■□□□□ 0.78
USP29-204ENST00000600940 PHRF1Q9P1Y6 1649 aaKnown RBP19.94■□□□□ 0.78
USP29-204ENST00000600940 PPIP5K1Q6PFW1 1433 aa19.93■□□□□ 0.78
USP29-204ENST00000600940 NLRP13Q86W25 1043 aa19.93■□□□□ 0.78
USP29-204ENST00000600940 TOPAZ1Q8N9V7 1692 aa19.93■□□□□ 0.78
USP29-204ENST00000600940 EN1Q05925 392 aaPredicted RBP19.92■□□□□ 0.78
USP29-204ENST00000600940 NEUROD1Q13562 356 aa19.92■□□□□ 0.78
USP29-204ENST00000600940 PSDA5PKW4 1024 aaPredicted RBP19.91■□□□□ 0.78
USP29-204ENST00000600940 L3MBTL2Q969R5 705 aa19.91■□□□□ 0.78
USP29-204ENST00000600940 PDE3BQ13370 1112 aa19.9■□□□□ 0.78
USP29-204ENST00000600940 QRICH2Q9H0J4 1663 aa19.9■□□□□ 0.78
USP29-204ENST00000600940 RGPD1P0DJD0 1748 aa19.9■□□□□ 0.78
USP29-204ENST00000600940 FAM196AQ6ZSG2 479 aa19.89■□□□□ 0.77
USP29-204ENST00000600940 CABP1Q9NZU7 370 aa19.89■□□□□ 0.77
USP29-204ENST00000600940 SIN3AQ96ST3 1273 aa19.88■□□□□ 0.77
USP29-204ENST00000600940 EVC2Q86UK5 1308 aa19.87■□□□□ 0.77
USP29-204ENST00000600940 TRIM37O94972 964 aa19.87■□□□□ 0.77
USP29-204ENST00000600940 GCP02774 474 aa19.87■□□□□ 0.77
USP29-204ENST00000600940 NLRP6P59044 892 aa19.87■□□□□ 0.77
USP29-204ENST00000600940 LARP1Q6PKG0 1096 aaKnown RBP19.87■□□□□ 0.77
USP29-204ENST00000600940 THSD7AQ9UPZ6 1657 aa19.87■□□□□ 0.77
USP29-204ENST00000600940 SSH2Q76I76 1423 aa19.86■□□□□ 0.77
USP29-204ENST00000600940 TCP11L2Q8N4U5 519 aa19.85■□□□□ 0.77
USP29-204ENST00000600940 NRKQ7Z2Y5 1582 aa19.85■□□□□ 0.77
USP29-204ENST00000600940 ROCK2O75116 1388 aaKnown RBP19.84■□□□□ 0.77
USP29-204ENST00000600940 USP19O94966 1318 aa19.84■□□□□ 0.77
USP29-204ENST00000600940 APBA3O96018 575 aa19.84■□□□□ 0.77
USP29-204ENST00000600940 BARGINQ6ZT62 677 aa19.84■□□□□ 0.77
USP29-204ENST00000600940 CPDO75976 1380 aa19.83■□□□□ 0.77
USP29-204ENST00000600940 CAMTA1Q9Y6Y1 1673 aa19.83■□□□□ 0.76
USP29-204ENST00000600940 BRD4O60885 1362 aaPredicted RBP19.83■□□□□ 0.76
USP29-204ENST00000600940 R3HDM1Q15032 1099 aaKnown RBP19.82■□□□□ 0.76
USP29-204ENST00000600940 EZH2Q15910 746 aaKnown RBP19.82■□□□□ 0.76
USP29-204ENST00000600940 THRAP3Q9Y2W1 955 aaKnown RBP19.81■□□□□ 0.76
USP29-204ENST00000600940 USP6P35125 1406 aa19.81■□□□□ 0.76
USP29-204ENST00000600940 SOX12O15370 315 aa19.79■□□□□ 0.76
USP29-204ENST00000600940 TNS1Q9HBL0 1735 aaKnown RBP19.79■□□□□ 0.76
USP29-204ENST00000600940 TRPM1Q7Z4N2 1603 aa19.78■□□□□ 0.76
USP29-204ENST00000600940 TOM1L2Q6ZVM7 507 aa19.78■□□□□ 0.76
USP29-204ENST00000600940 ZNF692Q9BU19 519 aaPredicted RBP19.78■□□□□ 0.76
USP29-204ENST00000600940 LMO7Q8WWI1 1683 aa19.77■□□□□ 0.76
USP29-204ENST00000600940 DISP2A7MBM2 1401 aa19.76■□□□□ 0.75
USP29-204ENST00000600940 COL5A2P05997 1499 aaPredicted RBP19.76■□□□□ 0.75
USP29-204ENST00000600940 CAMKK2Q96RR4 588 aa19.76■□□□□ 0.75
USP29-204ENST00000600940 CRB1P82279 1406 aa19.76■□□□□ 0.75
USP29-204ENST00000600940 LRP5O75197 1615 aa19.75■□□□□ 0.75
USP29-204ENST00000600940 AATKQ6ZMQ8 1374 aa19.74■□□□□ 0.75
USP29-204ENST00000600940 CSB-PGBD3P0DP91 1061 aa19.74■□□□□ 0.75
USP29-204ENST00000600940 NBPF14Q5TI25 921 aa19.74■□□□□ 0.75
USP29-204ENST00000600940 KCNH5Q8NCM2 988 aa19.74■□□□□ 0.75
USP29-204ENST00000600940 TTC21BQ7Z4L5 1316 aa19.73■□□□□ 0.75
USP29-204ENST00000600940 PARD3Q8TEW0 1356 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms