RNA–Protein interactions for RNA: ENST00000600648.1

FARP1-231, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, human

TSL 5

Gene FARP1, Length 433 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FARP1-231	ENST00000600648	NWD2	Q9ULI1	1742 aa		31.1	■■■□□ 2.57
FARP1-231	ENST00000600648	BTG4	Q9NY30	223 aa		31.1	■■■□□ 2.57
FARP1-231	ENST00000600648	CCDC61	Q9Y6R9	512 aa		31.09	■■■□□ 2.57
FARP1-231	ENST00000600648	ACE	P12821	1306 aa		31.08	■■■□□ 2.57
FARP1-231	ENST00000600648	CENPJ	Q9HC77	1338 aa	Predicted RBP	31.08	■■■□□ 2.57
FARP1-231	ENST00000600648	NUTM2G	Q5VZR2	741 aa		31.08	■■■□□ 2.57
FARP1-231	ENST00000600648	SRPK2	P78362	688 aa	Known RBP	31.07	■■■□□ 2.56
FARP1-231	ENST00000600648	NBPF8	Q3BBV2	869 aa		31.06	■■■□□ 2.56
FARP1-231	ENST00000600648		A0A0G2JS52	829 aa		31.05	■■■□□ 2.56
FARP1-231	ENST00000600648	MYT1	Q01538	1121 aa		31.05	■■■□□ 2.56
FARP1-231	ENST00000600648	CABP2	Q9NPB3	220 aa		31.04	■■■□□ 2.56
FARP1-231	ENST00000600648	PRDM11	Q9NQV5	511 aa		31.04	■■■□□ 2.56
FARP1-231	ENST00000600648	POLR3A	O14802	1390 aa	Predicted RBP	31.03	■■■□□ 2.56
FARP1-231	ENST00000600648	TOPAZ1	Q8N9V7	1692 aa		31.03	■■■□□ 2.56
FARP1-231	ENST00000600648	PLEKHG3	A1L390	1219 aa		31.02	■■■□□ 2.56
FARP1-231	ENST00000600648	BRWD3	Q6RI45	1802 aa		31.02	■■■□□ 2.56
FARP1-231	ENST00000600648	COL14A1	Q05707	1796 aa	Known RBP	31.02	■■■□□ 2.56
FARP1-231	ENST00000600648	FAM98C	Q17RN3	349 aa	Known RBP	31.01	■■■□□ 2.55
FARP1-231	ENST00000600648	NRAP	Q86VF7	1730 aa		31.01	■■■□□ 2.55
FARP1-231	ENST00000600648	CRYBG1	Q9Y4K1	1723 aa		31.01	■■■□□ 2.55
FARP1-231	ENST00000600648	CCDC125	Q86Z20	511 aa		31	■■■□□ 2.55
FARP1-231	ENST00000600648	ONECUT3	O60422	494 aa	Predicted RBP	30.99	■■■□□ 2.55
FARP1-231	ENST00000600648	CHRNA2	Q15822	529 aa		30.99	■■■□□ 2.55
FARP1-231	ENST00000600648	KIAA0232	Q92628	1395 aa		30.99	■■■□□ 2.55
FARP1-231	ENST00000600648	ZC3H6	P61129	1189 aa	Known RBP	30.98	■■■□□ 2.55
FARP1-231	ENST00000600648	PPIP5K1	Q6PFW1	1433 aa		30.98	■■■□□ 2.55
FARP1-231	ENST00000600648	KRT27	Q7Z3Y8	459 aa		30.97	■■■□□ 2.55
FARP1-231	ENST00000600648	QRICH2	Q9H0J4	1663 aa		30.97	■■■□□ 2.55
FARP1-231	ENST00000600648	ABTB2	Q8N961	1025 aa		30.96	■■■□□ 2.55
FARP1-231	ENST00000600648	BLM	P54132	1417 aa	Predicted RBP	30.93	■■■□□ 2.54
FARP1-231	ENST00000600648	PHRF1	Q9P1Y6	1649 aa	Known RBP	30.93	■■■□□ 2.54
FARP1-231	ENST00000600648	SPATA31A5	Q5VU36	1347 aa		30.93	■■■□□ 2.54
FARP1-231	ENST00000600648	SPATA31A7	Q8IWB4	1347 aa		30.93	■■■□□ 2.54
FARP1-231	ENST00000600648	ROCK2	O75116	1388 aa	Known RBP	30.92	■■■□□ 2.54
FARP1-231	ENST00000600648	TRPM1	Q7Z4N2	1603 aa		30.92	■■■□□ 2.54
FARP1-231	ENST00000600648	STRN4	Q9NRL3	753 aa		30.92	■■■□□ 2.54
FARP1-231	ENST00000600648	CABP1	Q9NZU7	370 aa		30.91	■■■□□ 2.54
FARP1-231	ENST00000600648	DEFB132	Q7Z7B7	95 aa		30.9	■■■□□ 2.54
FARP1-231	ENST00000600648	SF3B2	Q13435	895 aa	Known RBP	30.89	■■■□□ 2.54
FARP1-231	ENST00000600648	ZRANB1	Q9UGI0	708 aa		30.89	■■■□□ 2.54
FARP1-231	ENST00000600648	EVC2	Q86UK5	1308 aa		30.87	■■■□□ 2.53
FARP1-231	ENST00000600648	FAM182B	Q5T319	152 aa		30.85	■■■□□ 2.53
FARP1-231	ENST00000600648	EVA1C	P58658	441 aa		30.84	■■■□□ 2.53
FARP1-231	ENST00000600648	NLRP13	Q86W25	1043 aa		30.84	■■■□□ 2.53
FARP1-231	ENST00000600648	NRK	Q7Z2Y5	1582 aa		30.83	■■■□□ 2.53
FARP1-231	ENST00000600648	USP19	O94966	1318 aa		30.83	■■■□□ 2.53
FARP1-231	ENST00000600648	SPATA31A1	Q5TZJ5	1347 aa		30.83	■■■□□ 2.53
FARP1-231	ENST00000600648	USP35	Q9P2H5	1018 aa		30.83	■■■□□ 2.53
FARP1-231	ENST00000600648	SRCAP	Q6ZRS2	3230 aa		30.81	■■■□□ 2.52
FARP1-231	ENST00000600648	GC	P02774	474 aa		30.81	■■■□□ 2.52
FARP1-231	ENST00000600648	USP6	P35125	1406 aa		30.81	■■■□□ 2.52
FARP1-231	ENST00000600648	ZBTB7C	A1YPR0	619 aa		30.8	■■■□□ 2.52
FARP1-231	ENST00000600648	NLRP6	P59044	892 aa		30.79	■■■□□ 2.52
FARP1-231	ENST00000600648	CPD	O75976	1380 aa		30.78	■■■□□ 2.52
FARP1-231	ENST00000600648	SSH2	Q76I76	1423 aa		30.77	■■■□□ 2.52
FARP1-231	ENST00000600648	CAMTA1	Q9Y6Y1	1673 aa		30.77	■■■□□ 2.52
FARP1-231	ENST00000600648	BRD4	O60885	1362 aa	Predicted RBP	30.77	■■■□□ 2.52
FARP1-231	ENST00000600648	LARP1	Q6PKG0	1096 aa	Known RBP	30.76	■■■□□ 2.51
FARP1-231	ENST00000600648	THSD7A	Q9UPZ6	1657 aa		30.76	■■■□□ 2.51
FARP1-231	ENST00000600648	CARD11	Q9BXL7	1154 aa		30.74	■■■□□ 2.51
FARP1-231	ENST00000600648	TONSL	Q96HA7	1378 aa		30.73	■■■□□ 2.51
FARP1-231	ENST00000600648	BAG6	P46379	1132 aa		30.72	■■■□□ 2.51
FARP1-231	ENST00000600648	LMO7	Q8WWI1	1683 aa		30.71	■■■□□ 2.51
FARP1-231	ENST00000600648	TCP11L2	Q8N4U5	519 aa		30.68	■■■□□ 2.5
FARP1-231	ENST00000600648	ZNF692	Q9BU19	519 aa	Predicted RBP	30.68	■■■□□ 2.5
FARP1-231	ENST00000600648	TTC21B	Q7Z4L5	1316 aa		30.68	■■■□□ 2.5
FARP1-231	ENST00000600648	EN1	Q05925	392 aa	Predicted RBP	30.67	■■■□□ 2.5
FARP1-231	ENST00000600648	BARGIN	Q6ZT62	677 aa		30.67	■■■□□ 2.5
FARP1-231	ENST00000600648	PIK3C2A	O00443	1686 aa		30.67	■■■□□ 2.5
FARP1-231	ENST00000600648	SOX12	O15370	315 aa		30.66	■■■□□ 2.5
FARP1-231	ENST00000600648	COL5A2	P05997	1499 aa	Predicted RBP	30.65	■■■□□ 2.5
FARP1-231	ENST00000600648	SLIT3	O75094	1523 aa		30.65	■■■□□ 2.5
FARP1-231	ENST00000600648	TRIM26	Q12899	539 aa	Predicted RBP	30.64	■■■□□ 2.5
FARP1-231	ENST00000600648	PDE3B	Q13370	1112 aa		30.64	■■■□□ 2.5
FARP1-231	ENST00000600648	FAM196A	Q6ZSG2	479 aa		30.63	■■■□□ 2.49
FARP1-231	ENST00000600648	KTN1	Q86UP2	1357 aa	Known RBP	30.63	■■■□□ 2.49
FARP1-231	ENST00000600648	TRIM37	O94972	964 aa		30.62	■■■□□ 2.49
FARP1-231	ENST00000600648	AATK	Q6ZMQ8	1374 aa		30.62	■■■□□ 2.49
FARP1-231	ENST00000600648	RGPD1	P0DJD0	1748 aa		30.61	■■■□□ 2.49
FARP1-231	ENST00000600648	AKAP12	Q02952	1782 aa		30.6	■■■□□ 2.49
FARP1-231	ENST00000600648	CPSF1	Q10570	1443 aa	Known RBP	30.6	■■■□□ 2.49
FARP1-231	ENST00000600648	TMC1	Q8TDI8	760 aa		30.6	■■■□□ 2.49
FARP1-231	ENST00000600648	SBNO2	Q9Y2G9	1366 aa		30.6	■■■□□ 2.49
FARP1-231	ENST00000600648	TTC21A	Q8NDW8	1320 aa		30.59	■■■□□ 2.49
FARP1-231	ENST00000600648	PSD	A5PKW4	1024 aa	Predicted RBP	30.59	■■■□□ 2.49
FARP1-231	ENST00000600648	THRAP3	Q9Y2W1	955 aa	Known RBP	30.59	■■■□□ 2.49
FARP1-231	ENST00000600648	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	30.58	■■■□□ 2.49	9e-10	■■□□□ 13.9
FARP1-231	ENST00000600648	CRB1	P82279	1406 aa		30.57	■■■□□ 2.48
FARP1-231	ENST00000600648	AXIN2	Q9Y2T1	843 aa		30.57	■■■□□ 2.48
FARP1-231	ENST00000600648	TOM1L2	Q6ZVM7	507 aa		30.56	■■■□□ 2.48
FARP1-231	ENST00000600648	KCNH5	Q8NCM2	988 aa		30.56	■■■□□ 2.48
FARP1-231	ENST00000600648	EZH2	Q15910	746 aa	Known RBP	30.55	■■■□□ 2.48
FARP1-231	ENST00000600648	ARHGEF25	Q86VW2	580 aa		30.55	■■■□□ 2.48
FARP1-231	ENST00000600648	TNS1	Q9HBL0	1735 aa	Known RBP	30.55	■■■□□ 2.48
FARP1-231	ENST00000600648	APBA3	O96018	575 aa		30.53	■■■□□ 2.48
FARP1-231	ENST00000600648	SLC12A5	Q9H2X9	1139 aa		30.53	■■■□□ 2.48
FARP1-231	ENST00000600648	DISP2	A7MBM2	1401 aa		30.52	■■■□□ 2.48
FARP1-231	ENST00000600648	COL18A1	P39060	1754 aa		30.51	■■■□□ 2.48
FARP1-231	ENST00000600648	NME9	Q86XW9	330 aa		30.5	■■■□□ 2.47
FARP1-231	ENST00000600648	MON2	Q7Z3U7	1717 aa		30.5	■■■□□ 2.47

Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms