RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 FAM161AQ3B820 660 aa14.76□□□□□ -0.05
ARHGEF1-220ENST00000600274 SETBP1Q9Y6X0 1596 aa14.76□□□□□ -0.05
ARHGEF1-220ENST00000600274 PMFBP1Q8TBY8 1022 aa14.76□□□□□ -0.05
ARHGEF1-220ENST00000600274 PCDHB15Q9Y5E8 787 aa14.76□□□□□ -0.05
ARHGEF1-220ENST00000600274 IFT172Q9UG01 1749 aa14.75□□□□□ -0.05
ARHGEF1-220ENST00000600274 SSH1Q8WYL5 1049 aa14.75□□□□□ -0.05
ARHGEF1-220ENST00000600274 WASLO00401 505 aaPredicted RBP14.75□□□□□ -0.05
ARHGEF1-220ENST00000600274 DCTN1Q14203 1278 aa14.75□□□□□ -0.05
ARHGEF1-220ENST00000600274 PDE3AQ14432 1141 aa14.75□□□□□ -0.05
ARHGEF1-220ENST00000600274 ZKSCAN2Q63HK3 967 aa14.75□□□□□ -0.05
ARHGEF1-220ENST00000600274 C14orf37Q86TY3 774 aa14.75□□□□□ -0.05
ARHGEF1-220ENST00000600274 COG3Q96JB2 828 aa14.75□□□□□ -0.05
ARHGEF1-220ENST00000600274 ARHGAP31Q2M1Z3 1444 aa14.75□□□□□ -0.05
ARHGEF1-220ENST00000600274 NGEFQ8N5V2 710 aa14.75□□□□□ -0.05
ARHGEF1-220ENST00000600274 PHACTR3Q96KR7 559 aa14.75□□□□□ -0.05
ARHGEF1-220ENST00000600274 POLKQ9UBT6 870 aa14.75□□□□□ -0.05
ARHGEF1-220ENST00000600274 METP08581 1390 aa14.74□□□□□ -0.05
ARHGEF1-220ENST00000600274 ABCC11Q96J66 1382 aa14.74□□□□□ -0.05
ARHGEF1-220ENST00000600274 ZMYM3Q14202 1370 aa14.74□□□□□ -0.05
ARHGEF1-220ENST00000600274 DZIP1LQ8IYY4 767 aaKnown RBP14.74□□□□□ -0.05
ARHGEF1-220ENST00000600274 NUTM2GQ5VZR2 741 aa14.73□□□□□ -0.05
ARHGEF1-220ENST00000600274 RBM33Q96EV2 1170 aaKnown RBP14.73□□□□□ -0.05
ARHGEF1-220ENST00000600274 NOB1Q9ULX3 412 aaKnown RBP14.73□□□□□ -0.05
ARHGEF1-220ENST00000600274 TRIM35Q9UPQ4 493 aa14.73□□□□□ -0.05
ARHGEF1-220ENST00000600274 MYO5BQ9ULV0 1848 aa14.73□□□□□ -0.05
ARHGEF1-220ENST00000600274 ZBTB7CA1YPR0 619 aa14.73□□□□□ -0.05
ARHGEF1-220ENST00000600274 RICTORQ6R327 1708 aa14.73□□□□□ -0.05
ARHGEF1-220ENST00000600274 RIMBP3CA6NJZ7 1639 aa14.72□□□□□ -0.05
ARHGEF1-220ENST00000600274 RIMBP3BA6NNM3 1639 aa14.72□□□□□ -0.05
ARHGEF1-220ENST00000600274 RIMBP3Q9UFD9 1639 aa14.72□□□□□ -0.05
ARHGEF1-220ENST00000600274 FAM83GA6ND36 823 aa14.72□□□□□ -0.05
ARHGEF1-220ENST00000600274 HDGFP51858 240 aaKnown RBP14.71□□□□□ -0.05
ARHGEF1-220ENST00000600274 NSD2O96028 1365 aa14.71□□□□□ -0.05
ARHGEF1-220ENST00000600274 C8orf34Q49A92 452 aa14.71□□□□□ -0.05
ARHGEF1-220ENST00000600274 NEURL4Q96JN8 1562 aa14.71□□□□□ -0.06
ARHGEF1-220ENST00000600274 PTPRMP28827 1452 aa14.71□□□□□ -0.06
ARHGEF1-220ENST00000600274 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.7□□□□□ -0.06
ARHGEF1-220ENST00000600274 CCDC61Q9Y6R9 512 aa14.7□□□□□ -0.06
ARHGEF1-220ENST00000600274 C1orf115Q9H7X2 142 aa14.7□□□□□ -0.06
ARHGEF1-220ENST00000600274 PDZRN3Q9UPQ7 1066 aa14.7□□□□□ -0.06
ARHGEF1-220ENST00000600274 TRIM27P14373 513 aa14.7□□□□□ -0.06
ARHGEF1-220ENST00000600274 SPRYD3Q8NCJ5 442 aa14.7□□□□□ -0.06
ARHGEF1-220ENST00000600274 PUS7Q96PZ0 661 aaKnown RBP14.69□□□□□ -0.06
ARHGEF1-220ENST00000600274 PLEKHF1Q96S99 279 aa14.69□□□□□ -0.06
ARHGEF1-220ENST00000600274 PPIP5K1Q6PFW1 1433 aa14.69□□□□□ -0.06
ARHGEF1-220ENST00000600274 RWDD1Q9H446 243 aaPredicted RBP14.69□□□□□ -0.06
ARHGEF1-220ENST00000600274 ARHGEF28Q8N1W1 1705 aaKnown RBP14.68□□□□□ -0.06
ARHGEF1-220ENST00000600274 ALKQ9UM73 1620 aa14.68□□□□□ -0.06
ARHGEF1-220ENST00000600274 SEC24BO95487 1268 aa14.68□□□□□ -0.06
ARHGEF1-220ENST00000600274 TMEM57Q8N5G2 664 aa14.68□□□□□ -0.06
ARHGEF1-220ENST00000600274 DDRGK1Q96HY6 314 aa14.68□□□□□ -0.06
ARHGEF1-220ENST00000600274 PREX1Q8TCU6 1659 aa14.68□□□□□ -0.06
ARHGEF1-220ENST00000600274 LTKP29376 864 aa14.68□□□□□ -0.06
ARHGEF1-220ENST00000600274 MVPQ14764 893 aaKnown RBP14.68□□□□□ -0.06
ARHGEF1-220ENST00000600274 AEBP1Q8IUX7 1158 aa14.68□□□□□ -0.06
ARHGEF1-220ENST00000600274 A2ML1A8K2U0 1454 aa14.68□□□□□ -0.06
ARHGEF1-220ENST00000600274 PNNQ9H307 717 aaKnown RBP14.67□□□□□ -0.06
ARHGEF1-220ENST00000600274 MYO3AQ8NEV4 1616 aa14.67□□□□□ -0.06
ARHGEF1-220ENST00000600274 ZC3H13Q5T200 1668 aaKnown RBP14.67□□□□□ -0.06
ARHGEF1-220ENST00000600274 NGDNQ8NEJ9 315 aaKnown RBP14.67□□□□□ -0.06
ARHGEF1-220ENST00000600274 LTV1Q96GA3 475 aaPredicted RBP14.67□□□□□ -0.06
ARHGEF1-220ENST00000600274 EID1Q9Y6B2 187 aa14.67□□□□□ -0.06
ARHGEF1-220ENST00000600274 TMEM131LA2VDJ0 1609 aa14.67□□□□□ -0.06
ARHGEF1-220ENST00000600274 TNRQ92752 1358 aa14.66□□□□□ -0.06
ARHGEF1-220ENST00000600274 CCDC27Q2M243 656 aa14.66□□□□□ -0.06
ARHGEF1-220ENST00000600274 SULT6B1Q6IMI4 303 aa14.66□□□□□ -0.06
ARHGEF1-220ENST00000600274 TSPYL6Q8N831 410 aa14.66□□□□□ -0.06
ARHGEF1-220ENST00000600274 CLTCQ00610 1675 aaKnown RBP14.66□□□□□ -0.06
ARHGEF1-220ENST00000600274 FCHSD2O94868 740 aa14.66□□□□□ -0.06
ARHGEF1-220ENST00000600274 ATF7IPQ6VMQ6 1270 aa14.66□□□□□ -0.06
ARHGEF1-220ENST00000600274 ZFYVE9O95405 1425 aa14.66□□□□□ -0.06
ARHGEF1-220ENST00000600274 DIP2BQ9P265 1576 aa14.65□□□□□ -0.06
ARHGEF1-220ENST00000600274 PHF23Q9BUL5 403 aaPredicted RBP14.65□□□□□ -0.06
ARHGEF1-220ENST00000600274 SLKQ9H2G2 1235 aaPredicted RBP14.65□□□□□ -0.06
ARHGEF1-220ENST00000600274 NINLQ9Y2I6 1382 aa14.65□□□□□ -0.06
ARHGEF1-220ENST00000600274 RSPH6AQ9H0K4 717 aa14.65□□□□□ -0.06
ARHGEF1-220ENST00000600274 APBB1O00213 710 aa14.64□□□□□ -0.07
ARHGEF1-220ENST00000600274 MIS18AQ9NYP9 233 aa14.64□□□□□ -0.07
ARHGEF1-220ENST00000600274 NFE2L2Q16236 605 aa14.63□□□□□ -0.07
ARHGEF1-220ENST00000600274 KRT24Q2M2I5 525 aa14.63□□□□□ -0.07
ARHGEF1-220ENST00000600274 ACEP12821 1306 aa14.63□□□□□ -0.07
ARHGEF1-220ENST00000600274 PRR36Q9H6K5 1346 aa14.63□□□□□ -0.07
ARHGEF1-220ENST00000600274 MFAP1P55081 439 aaKnown RBP14.63□□□□□ -0.07
ARHGEF1-220ENST00000600274 HSP90AB2PQ58FF8 381 aa14.63□□□□□ -0.07
ARHGEF1-220ENST00000600274 MCM10Q7L590 875 aa14.63□□□□□ -0.07
ARHGEF1-220ENST00000600274 LNPKQ9C0E8 428 aa14.63□□□□□ -0.07
ARHGEF1-220ENST00000600274 UPF2Q9HAU5 1272 aaKnown RBP14.63□□□□□ -0.07
ARHGEF1-220ENST00000600274 CD163L1Q9NR16 1453 aa14.63□□□□□ -0.07
ARHGEF1-220ENST00000600274 PPP6R1Q9UPN7 881 aa14.63□□□□□ -0.07
ARHGEF1-220ENST00000600274 AMOTL2Q9Y2J4 779 aa14.62□□□□□ -0.07
ARHGEF1-220ENST00000600274 IPO8O15397 1037 aaKnown RBP14.62□□□□□ -0.07
ARHGEF1-220ENST00000600274 DDX19BQ9UMR2 479 aa14.61□□□□□ -0.07
ARHGEF1-220ENST00000600274 ARHGEF40Q8TER5 1519 aa14.61□□□□□ -0.07
ARHGEF1-220ENST00000600274 ROBO2Q9HCK4 1378 aa14.61□□□□□ -0.07
ARHGEF1-220ENST00000600274 SHPRHQ149N8 1683 aa14.61□□□□□ -0.07
ARHGEF1-220ENST00000600274 LMOD2Q6P5Q4 547 aa14.6□□□□□ -0.07
ARHGEF1-220ENST00000600274 NECTIN2Q92692 538 aa14.6□□□□□ -0.07
ARHGEF1-220ENST00000600274 IQSEC2Q5JU85 1478 aa14.6□□□□□ -0.07
ARHGEF1-220ENST00000600274 MBIPQ9NS73 344 aa14.6□□□□□ -0.07
ARHGEF1-220ENST00000600274 IL13P35225 146 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms