RNA–Protein interactions for RNA: ENST00000598594.1

PAF1-208, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 280 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-208ENST00000598594 PIK3R5Q8WYR1 880 aa7.12□□□□□ -1.27
PAF1-208ENST00000598594 DHX38Q92620 1227 aaKnown RBP7.12□□□□□ -1.27
PAF1-208ENST00000598594 CHPF2Q9P2E5 772 aa7.12□□□□□ -1.27
PAF1-208ENST00000598594 PTGDRQ13258 359 aa7.11□□□□□ -1.27
PAF1-208ENST00000598594 TMEM164Q5U3C3 297 aa7.11□□□□□ -1.27
PAF1-208ENST00000598594 CNPY4Q8N129 248 aa7.11□□□□□ -1.27
PAF1-208ENST00000598594 ALG2Q9H553 416 aa7.11□□□□□ -1.27
PAF1-208ENST00000598594 FAM217BQ9NTX9 383 aaPredicted RBP7.11□□□□□ -1.27
PAF1-208ENST00000598594 LIMD1Q9UGP4 676 aa7.11□□□□□ -1.27
PAF1-208ENST00000598594 FAN1Q9Y2M0 1017 aa7.11□□□□□ -1.27
PAF1-208ENST00000598594 TBX22Q9Y458 520 aa7.11□□□□□ -1.27
PAF1-208ENST00000598594 CREB3O43889 395 aa7.1□□□□□ -1.27
PAF1-208ENST00000598594 HDLBPQ00341 1268 aaKnown RBP7.1□□□□□ -1.27
PAF1-208ENST00000598594 VAC14Q08AM6 782 aa7.1□□□□□ -1.27
PAF1-208ENST00000598594 FBXO33Q7Z6M2 555 aa7.1□□□□□ -1.27
PAF1-208ENST00000598594 PMM1Q92871 262 aa7.1□□□□□ -1.27
PAF1-208ENST00000598594 EVI5LQ96CN4 794 aa7.1□□□□□ -1.27
PAF1-208ENST00000598594 UCN2Q96RP3 112 aa7.1□□□□□ -1.27
PAF1-208ENST00000598594 PRKAG2Q9UGJ0 569 aa7.1□□□□□ -1.27
PAF1-208ENST00000598594 EIF3JO75822 258 aaKnown RBP7.09□□□□□ -1.27
PAF1-208ENST00000598594 GTF2F1P35269 517 aaKnown RBP eCLIP7.09□□□□□ -1.27
PAF1-208ENST00000598594 SERPINB4P48594 390 aa7.09□□□□□ -1.27
PAF1-208ENST00000598594 FAM9BQ8IZU0 186 aa7.09□□□□□ -1.27
PAF1-208ENST00000598594 NME8Q8N427 588 aa7.09□□□□□ -1.27
PAF1-208ENST00000598594 PHOX2BQ99453 314 aa7.09□□□□□ -1.27
PAF1-208ENST00000598594 SPOCK3Q9BQ16 436 aa7.09□□□□□ -1.27
PAF1-208ENST00000598594 BACH2Q9BYV9 841 aa7.09□□□□□ -1.27
PAF1-208ENST00000598594 GPHNQ9NQX3 736 aaPredicted RBP7.09□□□□□ -1.27
PAF1-208ENST00000598594 NOP58Q9Y2X3 529 aaKnown RBP7.09□□□□□ -1.27
PAF1-208ENST00000598594 MAFBQ9Y5Q3 323 aaPredicted RBP7.09□□□□□ -1.27
PAF1-208ENST00000598594 AP1G2O75843 785 aa7.08□□□□□ -1.28
PAF1-208ENST00000598594 ATP2B1P20020 1258 aa7.08□□□□□ -1.28
PAF1-208ENST00000598594 NLGN1Q8N2Q7 840 aa7.08□□□□□ -1.28
PAF1-208ENST00000598594 STK32AQ8WU08 396 aa7.08□□□□□ -1.28
PAF1-208ENST00000598594 PIF1Q9H611 641 aa7.08□□□□□ -1.28
PAF1-208ENST00000598594 ZMIZ1Q9ULJ6 1067 aa7.08□□□□□ -1.28
PAF1-208ENST00000598594 IQSEC3Q9UPP2 1182 aaPredicted RBP7.08□□□□□ -1.28
PAF1-208ENST00000598594 NDUFB9Q9Y6M9 179 aa7.08□□□□□ -1.28
PAF1-208ENST00000598594 U2SURPO15042 1029 aaKnown RBP7.07□□□□□ -1.28
PAF1-208ENST00000598594 PPFIA4O75335 1185 aa7.07□□□□□ -1.28
PAF1-208ENST00000598594 SSFA2P28290 1259 aa7.07□□□□□ -1.28
PAF1-208ENST00000598594 ELOAQ14241 798 aaKnown RBP7.07□□□□□ -1.28
PAF1-208ENST00000598594 TCEAL1Q15170 157 aa7.07□□□□□ -1.28
PAF1-208ENST00000598594 LONRF3Q496Y0 759 aa7.07□□□□□ -1.28
PAF1-208ENST00000598594 ARSIQ5FYB1 569 aa7.07□□□□□ -1.28
PAF1-208ENST00000598594 GABBR1Q9UBS5 961 aa7.07□□□□□ -1.28
PAF1-208ENST00000598594 SCAMP3O14828 347 aaKnown RBP7.06□□□□□ -1.28
PAF1-208ENST00000598594 SH3BP5O60239 455 aa7.06□□□□□ -1.28
PAF1-208ENST00000598594 PBX2P40425 430 aa7.06□□□□□ -1.28
PAF1-208ENST00000598594 RAD51AP2Q09MP3 1159 aa7.06□□□□□ -1.28
PAF1-208ENST00000598594 RIC3Q7Z5B4 369 aa7.06□□□□□ -1.28
PAF1-208ENST00000598594 ZCRB1Q8TBF4 217 aaKnown RBP7.06□□□□□ -1.28
PAF1-208ENST00000598594 PMFBP1Q8TBY8 1022 aa7.06□□□□□ -1.28
PAF1-208ENST00000598594 BRINP2Q9C0B6 783 aa7.06□□□□□ -1.28
PAF1-208ENST00000598594 LSM11P83369 360 aaKnown RBP eCLIP7.05□□□□□ -1.28
PAF1-208ENST00000598594 DIXDC1Q155Q3 683 aa7.05□□□□□ -1.28
PAF1-208ENST00000598594 ZFYVE27Q5T4F4 411 aa7.05□□□□□ -1.28
PAF1-208ENST00000598594 PRR7Q8TB68 274 aa7.05□□□□□ -1.28
PAF1-208ENST00000598594 TINF2Q9BSI4 451 aa7.05□□□□□ -1.28
PAF1-208ENST00000598594 ZSWIM4Q9H7M6 989 aa7.05□□□□□ -1.28
PAF1-208ENST00000598594 USP17L8P0C7I0 530 aa7.04□□□□□ -1.28
PAF1-208ENST00000598594 MCCP23508 829 aa7.04□□□□□ -1.28
PAF1-208ENST00000598594 TBC1D9Q6ZT07 1266 aa7.04□□□□□ -1.28
PAF1-208ENST00000598594 GJD4Q96KN9 370 aaPredicted RBP7.04□□□□□ -1.28
PAF1-208ENST00000598594 PNMA2Q9UL42 364 aa7.04□□□□□ -1.28
PAF1-208ENST00000598594 NOVA2Q9UNW9 492 aaKnown RBP7.04□□□□□ -1.28
PAF1-208ENST00000598594 PAX3P23760 479 aa7.03□□□□□ -1.28
PAF1-208ENST00000598594 FOXD4Q12950 439 aaPredicted RBP7.03□□□□□ -1.28
PAF1-208ENST00000598594 DSG2Q14126 1118 aa7.03□□□□□ -1.28
PAF1-208ENST00000598594 GRIPAP1Q4V328 841 aa7.03□□□□□ -1.28
PAF1-208ENST00000598594 RNF187Q5TA31 235 aaPredicted RBP7.03□□□□□ -1.28
PAF1-208ENST00000598594 ANKRD13DQ6ZTN6 518 aa7.03□□□□□ -1.28
PAF1-208ENST00000598594 CCAR1Q8IX12 1150 aaKnown RBP7.03□□□□□ -1.28
PAF1-208ENST00000598594 SLC43A3Q8NBI5 491 aa7.03□□□□□ -1.28
PAF1-208ENST00000598594 KIF3CO14782 793 aa7.02□□□□□ -1.29
PAF1-208ENST00000598594 PRIM1P49642 420 aaKnown RBP7.02□□□□□ -1.29
PAF1-208ENST00000598594 CSPP1Q1MSJ5 1256 aa7.02□□□□□ -1.29
PAF1-208ENST00000598594 CCDC146Q8IYE0 955 aa7.02□□□□□ -1.29
PAF1-208ENST00000598594 DDX12PQ92771 950 aa7.02□□□□□ -1.29
PAF1-208ENST00000598594 CAPN10Q9HC96 672 aa7.02□□□□□ -1.29
PAF1-208ENST00000598594 SLAIN2Q9P270 581 aa7.02□□□□□ -1.29
PAF1-208ENST00000598594 COL4A3BPQ9Y5P4 624 aa7.02□□□□□ -1.29
PAF1-208ENST00000598594 SLC34A2O95436 690 aa7.01□□□□□ -1.29
PAF1-208ENST00000598594 APLP1P51693 650 aa7.01□□□□□ -1.29
PAF1-208ENST00000598594 MAP3K9P80192 1104 aa7.01□□□□□ -1.29
PAF1-208ENST00000598594 PLEKHG6Q3KR16 790 aa7.01□□□□□ -1.29
PAF1-208ENST00000598594 KANK4Q5T7N3 995 aaPredicted RBP7.01□□□□□ -1.29
PAF1-208ENST00000598594 NT5DC4Q86YG4 428 aa7.01□□□□□ -1.29
PAF1-208ENST00000598594 NLRP7Q8WX94 980 aa7.01□□□□□ -1.29
PAF1-208ENST00000598594 ARMC5Q96C12 935 aa7.01□□□□□ -1.29
PAF1-208ENST00000598594 NLRP2Q9NX02 1062 aa7.01□□□□□ -1.29
PAF1-208ENST00000598594 G3BP2Q9UN86 482 aaKnown RBP7.01□□□□□ -1.29
PAF1-208ENST00000598594 ATP9BO43861 1147 aa7□□□□□ -1.29
PAF1-208ENST00000598594 OS9Q13438 667 aaPredicted RBP7□□□□□ -1.29
PAF1-208ENST00000598594 MRPL58Q14197 206 aaKnown RBP7□□□□□ -1.29
PAF1-208ENST00000598594 BMS1Q14692 1282 aaKnown RBP7□□□□□ -1.29
PAF1-208ENST00000598594 TUSC1Q2TAM9 212 aa7□□□□□ -1.29
PAF1-208ENST00000598594 RTL5Q5HYW3 569 aaPredicted RBP7□□□□□ -1.29
PAF1-208ENST00000598594 TSHZ1Q6ZSZ6 1077 aa7□□□□□ -1.29
PAF1-208ENST00000598594 MAF1Q9H063 256 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms