RNA–Protein interactions for RNA: ENST00000598352.1

C19orf54-208, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 1 (best)

Gene C19orf54, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-208ENST00000598352 USP21Q9UK80 565 aa17.64■□□□□ 0.41
C19orf54-208ENST00000598352 ST20-MTHFSA0A0A6YYL1 179 aa17.63■□□□□ 0.41
C19orf54-208ENST00000598352 RXRBP28702 533 aa17.63■□□□□ 0.41
C19orf54-208ENST00000598352 FAM83GA6ND36 823 aa17.62■□□□□ 0.41
C19orf54-208ENST00000598352 PLEKHG5O94827 1062 aa17.62■□□□□ 0.41
C19orf54-208ENST00000598352 ATRNO75882 1429 aa17.62■□□□□ 0.41
C19orf54-208ENST00000598352 SLIT2O94813 1529 aa17.62■□□□□ 0.41
C19orf54-208ENST00000598352 SSH2Q76I76 1423 aa17.61■□□□□ 0.41
C19orf54-208ENST00000598352 MARF1Q9Y4F3 1742 aaKnown RBP17.61■□□□□ 0.41
C19orf54-208ENST00000598352 RBM6P78332 1123 aaKnown RBP17.6■□□□□ 0.41
C19orf54-208ENST00000598352 BRD4O60885 1362 aaPredicted RBP17.6■□□□□ 0.41
C19orf54-208ENST00000598352 ATAD2Q6PL18 1390 aa17.6■□□□□ 0.41
C19orf54-208ENST00000598352 USP6P35125 1406 aa17.6■□□□□ 0.41
C19orf54-208ENST00000598352 ABCA3Q99758 1704 aa17.6■□□□□ 0.41
C19orf54-208ENST00000598352 CDK12Q9NYV4 1490 aaPredicted RBP17.59■□□□□ 0.41
C19orf54-208ENST00000598352 PUS7Q96PZ0 661 aaKnown RBP17.59■□□□□ 0.41
C19orf54-208ENST00000598352 TRPC5Q9UL62 973 aaPredicted RBP17.59■□□□□ 0.41
C19orf54-208ENST00000598352 CPSF1Q10570 1443 aaKnown RBP17.58■□□□□ 0.41
C19orf54-208ENST00000598352 HAP1P54257 671 aaPredicted RBP17.58■□□□□ 0.4
C19orf54-208ENST00000598352 NUTM2GQ5VZR2 741 aa17.58■□□□□ 0.4
C19orf54-208ENST00000598352 UNC5CLQ8IV45 518 aa17.58■□□□□ 0.4
C19orf54-208ENST00000598352 USP47Q96K76 1375 aa17.57■□□□□ 0.4
C19orf54-208ENST00000598352 USP19O94966 1318 aa17.57■□□□□ 0.4
C19orf54-208ENST00000598352 CRYBG1Q9Y4K1 1723 aa17.57■□□□□ 0.4
C19orf54-208ENST00000598352 ABTB2Q8N961 1025 aa17.56■□□□□ 0.4
C19orf54-208ENST00000598352 ZNF692Q9BU19 519 aaPredicted RBP17.56■□□□□ 0.4
C19orf54-208ENST00000598352 GJD4Q96KN9 370 aaPredicted RBP17.54■□□□□ 0.4
C19orf54-208ENST00000598352 SLC12A5Q9H2X9 1139 aa17.54■□□□□ 0.4
C19orf54-208ENST00000598352 CD163L1Q9NR16 1453 aa17.54■□□□□ 0.4
C19orf54-208ENST00000598352 RGS12O14924 1447 aa17.54■□□□□ 0.4
C19orf54-208ENST00000598352 TTC21BQ7Z4L5 1316 aa17.53■□□□□ 0.4
C19orf54-208ENST00000598352 SLC24A1O60721 1099 aa17.52■□□□□ 0.4
C19orf54-208ENST00000598352 VPS72Q15906 364 aa17.52■□□□□ 0.4
C19orf54-208ENST00000598352 NLRP13Q86W25 1043 aa17.52■□□□□ 0.4
C19orf54-208ENST00000598352 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.52■□□□□ 0.39
C19orf54-208ENST00000598352 KIAA0232Q92628 1395 aa17.52■□□□□ 0.39
C19orf54-208ENST00000598352 GCP02774 474 aa17.51■□□□□ 0.39
C19orf54-208ENST00000598352 ZC3H6P61129 1189 aaKnown RBP17.51■□□□□ 0.39
C19orf54-208ENST00000598352 KTN1Q86UP2 1357 aaKnown RBP17.51■□□□□ 0.39
C19orf54-208ENST00000598352 NLRP6P59044 892 aa17.5■□□□□ 0.39
C19orf54-208ENST00000598352 PRDM11Q9NQV5 511 aa17.5■□□□□ 0.39
C19orf54-208ENST00000598352 BTG4Q9NY30 223 aa17.5■□□□□ 0.39
C19orf54-208ENST00000598352 CPDO75976 1380 aa17.5■□□□□ 0.39
C19orf54-208ENST00000598352 PHRF1Q9P1Y6 1649 aaKnown RBP17.5■□□□□ 0.39
C19orf54-208ENST00000598352 PLCH1Q4KWH8 1693 aa17.49■□□□□ 0.39
C19orf54-208ENST00000598352 AKAP12Q02952 1782 aa17.49■□□□□ 0.39
C19orf54-208ENST00000598352 CHRNA2Q15822 529 aa17.49■□□□□ 0.39
C19orf54-208ENST00000598352 TMC1Q8TDI8 760 aa17.49■□□□□ 0.39
C19orf54-208ENST00000598352 NWD2Q9ULI1 1742 aa17.49■□□□□ 0.39
C19orf54-208ENST00000598352 GLI3P10071 1580 aa17.49■□□□□ 0.39
C19orf54-208ENST00000598352 TTC21AQ8NDW8 1320 aa17.48■□□□□ 0.39
C19orf54-208ENST00000598352 NRKQ7Z2Y5 1582 aa17.48■□□□□ 0.39
C19orf54-208ENST00000598352 COL14A1Q05707 1796 aaKnown RBP17.48■□□□□ 0.39
C19orf54-208ENST00000598352 ONECUT3O60422 494 aaPredicted RBP17.47■□□□□ 0.39
C19orf54-208ENST00000598352 TMF1P82094 1093 aa17.47■□□□□ 0.39
C19orf54-208ENST00000598352 PIK3C2AO00443 1686 aa17.47■□□□□ 0.39
C19orf54-208ENST00000598352 SLIT3O75094 1523 aa17.47■□□□□ 0.39
C19orf54-208ENST00000598352 A0A1W2PP64 1363 aa17.46■□□□□ 0.39
C19orf54-208ENST00000598352 NINLQ9Y2I6 1382 aa17.46■□□□□ 0.39
C19orf54-208ENST00000598352 ZRANB1Q9UGI0 708 aa17.46■□□□□ 0.39
C19orf54-208ENST00000598352 NRAPQ86VF7 1730 aa17.46■□□□□ 0.39
C19orf54-208ENST00000598352 HDGFL2Q7Z4V5 671 aaPredicted RBP17.45■□□□□ 0.38
C19orf54-208ENST00000598352 TERF2IPQ9NYB0 399 aa17.45■□□□□ 0.38
C19orf54-208ENST00000598352 MON2Q7Z3U7 1717 aa17.44■□□□□ 0.38
C19orf54-208ENST00000598352 USP31Q70CQ4 1352 aa17.44■□□□□ 0.38
C19orf54-208ENST00000598352 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.44■□□□□ 0.38
C19orf54-208ENST00000598352 UPF1Q92900 1129 aaKnown RBP eCLIP17.44■□□□□ 0.381e-11■■■■□ 21.3
C19orf54-208ENST00000598352 EDC4Q6P2E9 1401 aaKnown RBP17.44■□□□□ 0.38
C19orf54-208ENST00000598352 SPATA31A5Q5VU36 1347 aa17.44■□□□□ 0.38
C19orf54-208ENST00000598352 SPATA31A7Q8IWB4 1347 aa17.44■□□□□ 0.38
C19orf54-208ENST00000598352 CAMTA1Q9Y6Y1 1673 aa17.43■□□□□ 0.38
C19orf54-208ENST00000598352 NME9Q86XW9 330 aa17.43■□□□□ 0.38
C19orf54-208ENST00000598352 AATKQ6ZMQ8 1374 aa17.41■□□□□ 0.38
C19orf54-208ENST00000598352 HSPA5P11021 654 aaKnown RBP17.41■□□□□ 0.38
C19orf54-208ENST00000598352 ARHGEF25Q86VW2 580 aa17.41■□□□□ 0.38
C19orf54-208ENST00000598352 SEPT12Q8IYM1 358 aa17.41■□□□□ 0.38
C19orf54-208ENST00000598352 CCDC9Q9Y3X0 531 aaKnown RBP17.41■□□□□ 0.38
C19orf54-208ENST00000598352 LMO7Q8WWI1 1683 aa17.41■□□□□ 0.38
C19orf54-208ENST00000598352 CDCA8Q53HL2 280 aa17.4■□□□□ 0.38
C19orf54-208ENST00000598352 ANKRD36BQ8N2N9 1353 aa17.4■□□□□ 0.38
C19orf54-208ENST00000598352 NFAT5O94916 1531 aa17.39■□□□□ 0.37
C19orf54-208ENST00000598352 EIF4G2P78344 907 aaKnown RBP eCLIP17.39■□□□□ 0.37
C19orf54-208ENST00000598352 KCNH5Q8NCM2 988 aa17.39■□□□□ 0.37
C19orf54-208ENST00000598352 STRN4Q9NRL3 753 aa17.39■□□□□ 0.37
C19orf54-208ENST00000598352 SPATA31A1Q5TZJ5 1347 aa17.39■□□□□ 0.37
C19orf54-208ENST00000598352 FAM98CQ17RN3 349 aaKnown RBP17.38■□□□□ 0.37
C19orf54-208ENST00000598352 LARP1Q6PKG0 1096 aaKnown RBP17.38■□□□□ 0.37
C19orf54-208ENST00000598352 AXIN2Q9Y2T1 843 aa17.38■□□□□ 0.37
C19orf54-208ENST00000598352 USP54Q70EL1 1684 aa17.37■□□□□ 0.37
C19orf54-208ENST00000598352 OVOS2A0A0J9YW53 1432 aa17.37■□□□□ 0.37
C19orf54-208ENST00000598352 OVOS2Q6IE36 1432 aa17.37■□□□□ 0.37
C19orf54-208ENST00000598352 COL18A1P39060 1754 aa17.36■□□□□ 0.37
C19orf54-208ENST00000598352 EVA1CP58658 441 aa17.36■□□□□ 0.37
C19orf54-208ENST00000598352 COL5A2P05997 1499 aaPredicted RBP17.36■□□□□ 0.37
C19orf54-208ENST00000598352 EP400Q96L91 3159 aa17.36■□□□□ 0.37
C19orf54-208ENST00000598352 SOX12O15370 315 aa17.35■□□□□ 0.37
C19orf54-208ENST00000598352 CARD14Q9BXL6 1004 aa17.35■□□□□ 0.37
C19orf54-208ENST00000598352 ZBTB7CA1YPR0 619 aa17.34■□□□□ 0.37
C19orf54-208ENST00000598352 C11orf95C9JLR9 678 aaPredicted RBP17.33■□□□□ 0.36
C19orf54-208ENST00000598352 FYB1O15117 783 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms