RNA–Protein interactions for RNA: ENST00000597088.1

PRKD2-207, Transcript of protein kinase D2, humanhuman

TSL 2

Gene PRKD2, Length 855 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD2-207ENST00000597088 CRYBG1Q9Y4K1 1723 aa33.99■■■■□ 3.03
PRKD2-207ENST00000597088 RGS17Q9UGC6 210 aaPredicted RBP33.99■■■■□ 3.03
PRKD2-207ENST00000597088 CPSF1Q10570 1443 aaKnown RBP33.98■■■■□ 3.03
PRKD2-207ENST00000597088 CABLES1Q8TDN4 633 aa33.98■■■■□ 3.03
PRKD2-207ENST00000597088 MON2Q7Z3U7 1717 aa33.98■■■■□ 3.03
PRKD2-207ENST00000597088 HSPA5P11021 654 aaKnown RBP33.97■■■■□ 3.03
PRKD2-207ENST00000597088 TMC1Q8TDI8 760 aa33.97■■■■□ 3.03
PRKD2-207ENST00000597088 NRKQ7Z2Y5 1582 aa33.97■■■■□ 3.03
PRKD2-207ENST00000597088 CD163L1Q9NR16 1453 aa33.96■■■■□ 3.03
PRKD2-207ENST00000597088 C8orf37Q96NL8 207 aa33.96■■■■□ 3.03
PRKD2-207ENST00000597088 BRD4O60885 1362 aaPredicted RBP33.96■■■■□ 3.03
PRKD2-207ENST00000597088 SSH2Q76I76 1423 aa33.95■■■■□ 3.02
PRKD2-207ENST00000597088 HAP1P54257 671 aaPredicted RBP33.93■■■■□ 3.02
PRKD2-207ENST00000597088 SLC12A5Q9H2X9 1139 aa33.93■■■■□ 3.02
PRKD2-207ENST00000597088 ZNF692Q9BU19 519 aaPredicted RBP33.92■■■■□ 3.02
PRKD2-207ENST00000597088 KTN1Q86UP2 1357 aaKnown RBP33.92■■■■□ 3.02
PRKD2-207ENST00000597088 PHRF1Q9P1Y6 1649 aaKnown RBP33.92■■■■□ 3.02
PRKD2-207ENST00000597088 NINLQ9Y2I6 1382 aa33.91■■■■□ 3.02
PRKD2-207ENST00000597088 AFF2P51816 1311 aa33.91■■■■□ 3.02
PRKD2-207ENST00000597088 NUTM2GQ5VZR2 741 aa33.91■■■■□ 3.02
PRKD2-207ENST00000597088 PIK3C2AO00443 1686 aa33.9■■■■□ 3.02
PRKD2-207ENST00000597088 CDCA8Q53HL2 280 aa33.89■■■■□ 3.02
PRKD2-207ENST00000597088 ABTB2Q8N961 1025 aa33.89■■■■□ 3.02
PRKD2-207ENST00000597088 NGLY1Q96IV0 654 aa33.88■■■■□ 3.01
PRKD2-207ENST00000597088 A0A1W2PP64 1363 aa33.87■■■■□ 3.01
PRKD2-207ENST00000597088 MYOM1P52179 1685 aa33.87■■■■□ 3.01
PRKD2-207ENST00000597088 HDGFL2Q7Z4V5 671 aaPredicted RBP33.86■■■■□ 3.01
PRKD2-207ENST00000597088 TTC21BQ7Z4L5 1316 aa33.85■■■■□ 3.01
PRKD2-207ENST00000597088 TERF2IPQ9NYB0 399 aa33.85■■■■□ 3.01
PRKD2-207ENST00000597088 POTEAQ6S8J7 498 aa33.84■■■■□ 3.01
PRKD2-207ENST00000597088 ZNF772Q68DY9 489 aaPredicted RBP33.83■■■■□ 3.01
PRKD2-207ENST00000597088 ILDR2Q71H61 639 aa33.83■■■■□ 3.01
PRKD2-207ENST00000597088 USP19O94966 1318 aa33.81■■■■□ 3
PRKD2-207ENST00000597088 TTC21AQ8NDW8 1320 aa33.81■■■■□ 3
PRKD2-207ENST00000597088 PLCH1Q4KWH8 1693 aa33.81■■■■□ 3
PRKD2-207ENST00000597088 EDC4Q6P2E9 1401 aaKnown RBP33.8■■■■□ 3
PRKD2-207ENST00000597088 NLRP13Q86W25 1043 aa33.79■■■■□ 3
PRKD2-207ENST00000597088 FNBP4Q8N3X1 1017 aaPredicted RBP33.79■■■■□ 3
PRKD2-207ENST00000597088 ANKRD36BQ8N2N9 1353 aa33.79■■■■□ 3
PRKD2-207ENST00000597088 NLRP6P59044 892 aa33.77■■■■□ 3
PRKD2-207ENST00000597088 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.77■■■■□ 3
PRKD2-207ENST00000597088 COL14A1Q05707 1796 aaKnown RBP33.76■■■■□ 3
PRKD2-207ENST00000597088 SLIT3O75094 1523 aa33.76■■■■□ 3
PRKD2-207ENST00000597088 SLIT2O94813 1529 aa33.76■■■■□ 3
PRKD2-207ENST00000597088 USP21Q9UK80 565 aa33.76■■■□□ 2.99
PRKD2-207ENST00000597088 TNKS1BP1Q9C0C2 1729 aaKnown RBP33.75■■■□□ 2.99
PRKD2-207ENST00000597088 NWD2Q9ULI1 1742 aa33.75■■■□□ 2.99
PRKD2-207ENST00000597088 BCL9LQ86UU0 1499 aa33.75■■■□□ 2.99
PRKD2-207ENST00000597088 POLR3GLQ9BT43 218 aa33.74■■■□□ 2.99
PRKD2-207ENST00000597088 USP54Q70EL1 1684 aa33.73■■■□□ 2.99
PRKD2-207ENST00000597088 KIAA0232Q92628 1395 aa33.72■■■□□ 2.99
PRKD2-207ENST00000597088 FAM83GA6ND36 823 aa33.72■■■□□ 2.99
PRKD2-207ENST00000597088 NME9Q86XW9 330 aa33.71■■■□□ 2.99
PRKD2-207ENST00000597088 C11orf95C9JLR9 678 aaPredicted RBP33.69■■■□□ 2.98
PRKD2-207ENST00000597088 GCP02774 474 aa33.69■■■□□ 2.98
PRKD2-207ENST00000597088 ZC3H6P61129 1189 aaKnown RBP33.69■■■□□ 2.98
PRKD2-207ENST00000597088 PRDM11Q9NQV5 511 aa33.69■■■□□ 2.98
PRKD2-207ENST00000597088 NRAPQ86VF7 1730 aa33.69■■■□□ 2.98
PRKD2-207ENST00000597088 ZRANB1Q9UGI0 708 aa33.68■■■□□ 2.98
PRKD2-207ENST00000597088 ATRNO75882 1429 aa33.68■■■□□ 2.98
PRKD2-207ENST00000597088 QTRT2Q9H974 415 aaKnown RBP33.67■■■□□ 2.98
PRKD2-207ENST00000597088 USP31Q70CQ4 1352 aa33.67■■■□□ 2.98
PRKD2-207ENST00000597088 CPDO75976 1380 aa33.65■■■□□ 2.98
PRKD2-207ENST00000597088 UNC5CLQ8IV45 518 aa33.65■■■□□ 2.98
PRKD2-207ENST00000597088 TRPC5Q9UL62 973 aaPredicted RBP33.65■■■□□ 2.98
PRKD2-207ENST00000597088 CHRNA2Q15822 529 aa33.64■■■□□ 2.98
PRKD2-207ENST00000597088 NFAT5O94916 1531 aa33.63■■■□□ 2.97
PRKD2-207ENST00000597088 BTG4Q9NY30 223 aa33.62■■■□□ 2.97
PRKD2-207ENST00000597088 KIF20BQ96Q89 1820 aa33.62■■■□□ 2.97
PRKD2-207ENST00000597088 OVOS2A0A0J9YW53 1432 aa33.62■■■□□ 2.97
PRKD2-207ENST00000597088 OVOS2Q6IE36 1432 aa33.62■■■□□ 2.97
PRKD2-207ENST00000597088 LMO7Q8WWI1 1683 aa33.61■■■□□ 2.97
PRKD2-207ENST00000597088 RXRBP28702 533 aa33.61■■■□□ 2.97
PRKD2-207ENST00000597088 SOX12O15370 315 aa33.6■■■□□ 2.97
PRKD2-207ENST00000597088 KIF7Q2M1P5 1343 aa33.59■■■□□ 2.97
PRKD2-207ENST00000597088 KCNH5Q8NCM2 988 aa33.59■■■□□ 2.97
PRKD2-207ENST00000597088 CARD14Q9BXL6 1004 aa33.59■■■□□ 2.97
PRKD2-207ENST00000597088 NSD3Q9BZ95 1437 aa33.59■■■□□ 2.97
PRKD2-207ENST00000597088 RBM6P78332 1123 aaKnown RBP33.58■■■□□ 2.97
PRKD2-207ENST00000597088 ZBTB7CA1YPR0 619 aa33.56■■■□□ 2.96
PRKD2-207ENST00000597088 GLI3P10071 1580 aa33.55■■■□□ 2.96
PRKD2-207ENST00000597088 CAMTA1Q9Y6Y1 1673 aa33.55■■■□□ 2.96
PRKD2-207ENST00000597088 CDK12Q9NYV4 1490 aaPredicted RBP33.54■■■□□ 2.96
PRKD2-207ENST00000597088 COL18A1P39060 1754 aa33.54■■■□□ 2.96
PRKD2-207ENST00000597088 VPS72Q15906 364 aa33.53■■■□□ 2.96
PRKD2-207ENST00000597088 GJD4Q96KN9 370 aaPredicted RBP33.52■■■□□ 2.96
PRKD2-207ENST00000597088 RGS12O14924 1447 aa33.52■■■□□ 2.96
PRKD2-207ENST00000597088 LTN1O94822 1766 aa33.52■■■□□ 2.96
PRKD2-207ENST00000597088 AATKQ6ZMQ8 1374 aa33.51■■■□□ 2.96
PRKD2-207ENST00000597088 FYB1O15117 783 aa33.51■■■□□ 2.95
PRKD2-207ENST00000597088 COG3Q96JB2 828 aa33.51■■■□□ 2.95
PRKD2-207ENST00000597088 ARHGEF25Q86VW2 580 aa33.5■■■□□ 2.95
PRKD2-207ENST00000597088 GGNBP2Q9H3C7 697 aa33.5■■■□□ 2.95
PRKD2-207ENST00000597088 CCDC9Q9Y3X0 531 aaKnown RBP33.5■■■□□ 2.95
PRKD2-207ENST00000597088 PANK3Q9H999 370 aa33.49■■■□□ 2.95
PRKD2-207ENST00000597088 CCDC7Q96M83 1385 aa33.48■■■□□ 2.95
PRKD2-207ENST00000597088 STRN4Q9NRL3 753 aa33.47■■■□□ 2.95
PRKD2-207ENST00000597088 RGPD5Q99666 1765 aa33.47■■■□□ 2.95
PRKD2-207ENST00000597088 COL5A2P05997 1499 aaPredicted RBP33.46■■■□□ 2.95
PRKD2-207ENST00000597088 WASHC2AQ641Q2 1341 aa33.46■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms