RNA–Protein interactions for RNA: ENST00000597023.1

PPFIA4-208, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 4

Gene PPFIA4, Length 496 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-208ENST00000597023 POLR3AO14802 1390 aaPredicted RBP22.28■■□□□ 1.16
PPFIA4-208ENST00000597023 ALS2Q96Q42 1657 aa22.28■■□□□ 1.16
PPFIA4-208ENST00000597023 VPS72Q15906 364 aa22.28■■□□□ 1.16
PPFIA4-208ENST00000597023 BTG4Q9NY30 223 aa22.28■■□□□ 1.16
PPFIA4-208ENST00000597023 ABCA3Q99758 1704 aa22.27■■□□□ 1.16
PPFIA4-208ENST00000597023 PPIP5K1Q6PFW1 1433 aa22.26■■□□□ 1.15
PPFIA4-208ENST00000597023 CABP1Q9NZU7 370 aa22.26■■□□□ 1.15
PPFIA4-208ENST00000597023 TRPM1Q7Z4N2 1603 aa22.26■■□□□ 1.15
PPFIA4-208ENST00000597023 ITSN1Q15811 1721 aa22.26■■□□□ 1.15
PPFIA4-208ENST00000597023 ATAD2Q6PL18 1390 aa22.25■■□□□ 1.15
PPFIA4-208ENST00000597023 GLI3P10071 1580 aa22.25■■□□□ 1.15
PPFIA4-208ENST00000597023 CHRNA2Q15822 529 aa22.24■■□□□ 1.15
PPFIA4-208ENST00000597023 ABTB2Q8N961 1025 aa22.24■■□□□ 1.15
PPFIA4-208ENST00000597023 PRDM11Q9NQV5 511 aa22.24■■□□□ 1.15
PPFIA4-208ENST00000597023 TONSLQ96HA7 1378 aa22.24■■□□□ 1.15
PPFIA4-208ENST00000597023 ZC3H6P61129 1189 aaKnown RBP22.23■■□□□ 1.15
PPFIA4-208ENST00000597023 SEPT12Q8IYM1 358 aa22.23■■□□□ 1.15
PPFIA4-208ENST00000597023 PLCH1Q4KWH8 1693 aa22.23■■□□□ 1.15
PPFIA4-208ENST00000597023 TOPAZ1Q8N9V7 1692 aa22.23■■□□□ 1.15
PPFIA4-208ENST00000597023 QRICH2Q9H0J4 1663 aa22.23■■□□□ 1.15
PPFIA4-208ENST00000597023 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.23■■□□□ 1.15
PPFIA4-208ENST00000597023 EVC2Q86UK5 1308 aa22.22■■□□□ 1.15
PPFIA4-208ENST00000597023 KIAA0232Q92628 1395 aa22.21■■□□□ 1.15
PPFIA4-208ENST00000597023 A0A0G2JS52 829 aa22.2■■□□□ 1.14
PPFIA4-208ENST00000597023 MYT1Q01538 1121 aa22.2■■□□□ 1.14
PPFIA4-208ENST00000597023 CARD11Q9BXL7 1154 aa22.2■■□□□ 1.14
PPFIA4-208ENST00000597023 FAM98CQ17RN3 349 aaKnown RBP22.18■■□□□ 1.14
PPFIA4-208ENST00000597023 STRN4Q9NRL3 753 aa22.17■■□□□ 1.14
PPFIA4-208ENST00000597023 NWD2Q9ULI1 1742 aa22.17■■□□□ 1.14
PPFIA4-208ENST00000597023 ONECUT3O60422 494 aaPredicted RBP22.16■■□□□ 1.14
PPFIA4-208ENST00000597023 CRYBG1Q9Y4K1 1723 aa22.16■■□□□ 1.14
PPFIA4-208ENST00000597023 NLRP13Q86W25 1043 aa22.15■■□□□ 1.14
PPFIA4-208ENST00000597023 COL14A1Q05707 1796 aaKnown RBP22.15■■□□□ 1.14
PPFIA4-208ENST00000597023 ZBTB7CA1YPR0 619 aa22.13■■□□□ 1.13
PPFIA4-208ENST00000597023 NLRP6P59044 892 aa22.13■■□□□ 1.13
PPFIA4-208ENST00000597023 KRT27Q7Z3Y8 459 aa22.13■■□□□ 1.13
PPFIA4-208ENST00000597023 NRAPQ86VF7 1730 aa22.13■■□□□ 1.13
PPFIA4-208ENST00000597023 USP6P35125 1406 aa22.13■■□□□ 1.13
PPFIA4-208ENST00000597023 SPATA31A5Q5VU36 1347 aa22.12■■□□□ 1.13
PPFIA4-208ENST00000597023 SPATA31A7Q8IWB4 1347 aa22.12■■□□□ 1.13
PPFIA4-208ENST00000597023 GCP02774 474 aa22.12■■□□□ 1.13
PPFIA4-208ENST00000597023 USP19O94966 1318 aa22.11■■□□□ 1.13
PPFIA4-208ENST00000597023 PHRF1Q9P1Y6 1649 aaKnown RBP22.11■■□□□ 1.13
PPFIA4-208ENST00000597023 EVA1CP58658 441 aa22.1■■□□□ 1.13
PPFIA4-208ENST00000597023 USP35Q9P2H5 1018 aa22.1■■□□□ 1.13
PPFIA4-208ENST00000597023 FAM182BQ5T319 152 aa22.09■■□□□ 1.13
PPFIA4-208ENST00000597023 BRWD3Q6RI45 1802 aa22.08■■□□□ 1.13
PPFIA4-208ENST00000597023 CCDC125Q86Z20 511 aa22.08■■□□□ 1.13
PPFIA4-208ENST00000597023 BRD4O60885 1362 aaPredicted RBP22.07■■□□□ 1.12
PPFIA4-208ENST00000597023 NRKQ7Z2Y5 1582 aa22.07■■□□□ 1.12
PPFIA4-208ENST00000597023 SPATA31A1Q5TZJ5 1347 aa22.06■■□□□ 1.12
PPFIA4-208ENST00000597023 TTC21BQ7Z4L5 1316 aa22.06■■□□□ 1.12
PPFIA4-208ENST00000597023 SSH2Q76I76 1423 aa22.06■■□□□ 1.12
PPFIA4-208ENST00000597023 SOX12O15370 315 aa22.06■■□□□ 1.12
PPFIA4-208ENST00000597023 LARP1Q6PKG0 1096 aaKnown RBP22.06■■□□□ 1.12
PPFIA4-208ENST00000597023 DEFB132Q7Z7B7 95 aa22.06■■□□□ 1.12
PPFIA4-208ENST00000597023 ZNF692Q9BU19 519 aaPredicted RBP22.06■■□□□ 1.12
PPFIA4-208ENST00000597023 PCGF6Q9BYE7 350 aa22.06■■□□□ 1.12
PPFIA4-208ENST00000597023 EP400Q96L91 3159 aa22.06■■□□□ 1.12
PPFIA4-208ENST00000597023 CPDO75976 1380 aa22.05■■□□□ 1.12
PPFIA4-208ENST00000597023 TMC1Q8TDI8 760 aa22.05■■□□□ 1.12
PPFIA4-208ENST00000597023 CAMTA1Q9Y6Y1 1673 aa22.04■■□□□ 1.12
PPFIA4-208ENST00000597023 BLMP54132 1417 aaPredicted RBP22.03■■□□□ 1.12
PPFIA4-208ENST00000597023 KTN1Q86UP2 1357 aaKnown RBP22.02■■□□□ 1.12
PPFIA4-208ENST00000597023 SBNO2Q9Y2G9 1366 aa22.02■■□□□ 1.12
PPFIA4-208ENST00000597023 ST20-MTHFSA0A0A6YYL1 179 aa22.02■■□□□ 1.12
PPFIA4-208ENST00000597023 SF3B2Q13435 895 aaKnown RBP22.02■■□□□ 1.12
PPFIA4-208ENST00000597023 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.02■■□□□ 1.12
PPFIA4-208ENST00000597023 SLC12A5Q9H2X9 1139 aa22.02■■□□□ 1.12
PPFIA4-208ENST00000597023 ZRANB1Q9UGI0 708 aa22.02■■□□□ 1.12
PPFIA4-208ENST00000597023 CPSF1Q10570 1443 aaKnown RBP22.01■■□□□ 1.11
PPFIA4-208ENST00000597023 PIK3C2AO00443 1686 aa21.98■■□□□ 1.11
PPFIA4-208ENST00000597023 TESK2Q96S53 571 aa21.98■■□□□ 1.11
PPFIA4-208ENST00000597023 TTC21AQ8NDW8 1320 aa21.98■■□□□ 1.11
PPFIA4-208ENST00000597023 SLIT3O75094 1523 aa21.97■■□□□ 1.11
PPFIA4-208ENST00000597023 TCP11L2Q8N4U5 519 aa21.97■■□□□ 1.11
PPFIA4-208ENST00000597023 AXIN2Q9Y2T1 843 aa21.97■■□□□ 1.11
PPFIA4-208ENST00000597023 LMO7Q8WWI1 1683 aa21.96■■□□□ 1.11
PPFIA4-208ENST00000597023 BARGINQ6ZT62 677 aa21.96■■□□□ 1.11
PPFIA4-208ENST00000597023 NME9Q86XW9 330 aa21.96■■□□□ 1.11
PPFIA4-208ENST00000597023 AATKQ6ZMQ8 1374 aa21.96■■□□□ 1.11
PPFIA4-208ENST00000597023 CD163L1Q9NR16 1453 aa21.96■■□□□ 1.11
PPFIA4-208ENST00000597023 THSD7AQ9UPZ6 1657 aa21.95■■□□□ 1.1
PPFIA4-208ENST00000597023 HDGFL2Q7Z4V5 671 aaPredicted RBP21.95■■□□□ 1.1
PPFIA4-208ENST00000597023 ARHGEF25Q86VW2 580 aa21.95■■□□□ 1.1
PPFIA4-208ENST00000597023 COL5A2P05997 1499 aaPredicted RBP21.95■■□□□ 1.1
PPFIA4-208ENST00000597023 AKAP12Q02952 1782 aa21.94■■□□□ 1.1
PPFIA4-208ENST00000597023 KCNH5Q8NCM2 988 aa21.94■■□□□ 1.1
PPFIA4-208ENST00000597023 PDE3BQ13370 1112 aa21.92■■□□□ 1.1
PPFIA4-208ENST00000597023 TOM1L2Q6ZVM7 507 aa21.92■■□□□ 1.1
PPFIA4-208ENST00000597023 BAG6P46379 1132 aa21.91■■□□□ 1.1
PPFIA4-208ENST00000597023 EN1Q05925 392 aaPredicted RBP21.91■■□□□ 1.1
PPFIA4-208ENST00000597023 TERF2IPQ9NYB0 399 aa21.91■■□□□ 1.1
PPFIA4-208ENST00000597023 A0A1W2PP64 1363 aa21.9■■□□□ 1.1
PPFIA4-208ENST00000597023 TRIM37O94972 964 aa21.9■■□□□ 1.1
PPFIA4-208ENST00000597023 THRAP3Q9Y2W1 955 aaKnown RBP21.9■■□□□ 1.1
PPFIA4-208ENST00000597023 CRB1P82279 1406 aa21.89■■□□□ 1.1
PPFIA4-208ENST00000597023 CSB-PGBD3P0DP91 1061 aa21.89■■□□□ 1.09
PPFIA4-208ENST00000597023 FAM196AQ6ZSG2 479 aa21.89■■□□□ 1.09
PPFIA4-208ENST00000597023 PUS7Q96PZ0 661 aaKnown RBP21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms