RNA–Protein interactions for RNA: ENST00000596788.1

IRF3-214, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-214ENST00000596788 AHDC1Q5TGY3 1603 aaPredicted RBP28.55■■■□□ 2.16
IRF3-214ENST00000596788 BRD4O60885 1362 aaPredicted RBP28.55■■■□□ 2.16
IRF3-214ENST00000596788 TTC21BQ7Z4L5 1316 aa28.55■■■□□ 2.16
IRF3-214ENST00000596788 ALS2Q96Q42 1657 aa28.54■■■□□ 2.16
IRF3-214ENST00000596788 NPHP3Q7Z494 1330 aa28.54■■■□□ 2.16
IRF3-214ENST00000596788 TOM1O60784 492 aa28.54■■■□□ 2.16
IRF3-214ENST00000596788 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.54■■■□□ 2.16
IRF3-214ENST00000596788 DDX17Q92841 729 aaKnown RBP28.54■■■□□ 2.16
IRF3-214ENST00000596788 NSD2O96028 1365 aa28.53■■■□□ 2.16
IRF3-214ENST00000596788 UBAP1LF5GYI3 381 aa28.53■■■□□ 2.16
IRF3-214ENST00000596788 XPCQ01831 940 aaPredicted RBP28.53■■■□□ 2.16
IRF3-214ENST00000596788 PSME1Q06323 249 aa28.53■■■□□ 2.16
IRF3-214ENST00000596788 TTC21AQ8NDW8 1320 aa28.51■■■□□ 2.15
IRF3-214ENST00000596788 CNGB1Q14028 1251 aaPredicted RBP28.51■■■□□ 2.15
IRF3-214ENST00000596788 CC2D1BQ5T0F9 858 aaKnown RBP28.51■■■□□ 2.15
IRF3-214ENST00000596788 KRT28Q7Z3Y7 464 aa28.5■■■□□ 2.15
IRF3-214ENST00000596788 NME9Q86XW9 330 aa28.5■■■□□ 2.15
IRF3-214ENST00000596788 PARD3Q8TEW0 1356 aa28.49■■■□□ 2.15
IRF3-214ENST00000596788 FYB1O15117 783 aa28.48■■■□□ 2.15
IRF3-214ENST00000596788 PHLPP1O60346 1717 aa28.47■■■□□ 2.15
IRF3-214ENST00000596788 OVOS2A0A0J9YW53 1432 aa28.47■■■□□ 2.15
IRF3-214ENST00000596788 OVOS2Q6IE36 1432 aa28.47■■■□□ 2.15
IRF3-214ENST00000596788 SBNO1A3KN83 1393 aa28.47■■■□□ 2.15
IRF3-214ENST00000596788 ANP32CO43423 234 aa28.46■■■□□ 2.15
IRF3-214ENST00000596788 GGNBP2Q9H3C7 697 aa28.46■■■□□ 2.15
IRF3-214ENST00000596788 SOS2Q07890 1332 aaPredicted RBP28.45■■■□□ 2.15
IRF3-214ENST00000596788 TNS3Q68CZ2 1445 aa28.45■■■□□ 2.15
IRF3-214ENST00000596788 PIP4K2BP78356 416 aa28.45■■■□□ 2.14
IRF3-214ENST00000596788 PRKRIP1Q9H875 184 aaPredicted RBP28.45■■■□□ 2.14
IRF3-214ENST00000596788 ZRANB1Q9UGI0 708 aa28.45■■■□□ 2.14
IRF3-214ENST00000596788 COL16A1Q07092 1604 aaPredicted RBP28.44■■■□□ 2.14
IRF3-214ENST00000596788 PAK3O75914 559 aaPredicted RBP28.44■■■□□ 2.14
IRF3-214ENST00000596788 USP31Q70CQ4 1352 aa28.43■■■□□ 2.14
IRF3-214ENST00000596788 CRYBG1Q9Y4K1 1723 aa28.42■■■□□ 2.14
IRF3-214ENST00000596788 SCAF1Q9H7N4 1312 aaKnown RBP28.42■■■□□ 2.14
IRF3-214ENST00000596788 MED1Q15648 1581 aaPredicted RBP28.4■■■□□ 2.14
IRF3-214ENST00000596788 SPATA31A3Q5VYP0 1347 aa28.39■■■□□ 2.13
IRF3-214ENST00000596788 RALBP1Q15311 655 aa28.38■■■□□ 2.13
IRF3-214ENST00000596788 MORC1Q86VD1 984 aa28.38■■■□□ 2.13
IRF3-214ENST00000596788 MIER1Q8N108 512 aa28.38■■■□□ 2.13
IRF3-214ENST00000596788 ABTB2Q8N961 1025 aa28.38■■■□□ 2.13
IRF3-214ENST00000596788 PHRF1Q9P1Y6 1649 aaKnown RBP28.38■■■□□ 2.13
IRF3-214ENST00000596788 COG3Q96JB2 828 aa28.37■■■□□ 2.13
IRF3-214ENST00000596788 ABCA3Q99758 1704 aa28.37■■■□□ 2.13
IRF3-214ENST00000596788 SLIT3O75094 1523 aa28.37■■■□□ 2.13
IRF3-214ENST00000596788 NUTM2GQ5VZR2 741 aa28.36■■■□□ 2.13
IRF3-214ENST00000596788 ARHGEF10O15013 1369 aa28.35■■■□□ 2.13
IRF3-214ENST00000596788 NLRP6P59044 892 aa28.34■■■□□ 2.13
IRF3-214ENST00000596788 LMOD2Q6P5Q4 547 aa28.33■■■□□ 2.13
IRF3-214ENST00000596788 USP19O94966 1318 aa28.32■■■□□ 2.12
IRF3-214ENST00000596788 MYBBP1AQ9BQG0 1328 aaKnown RBP28.32■■■□□ 2.12
IRF3-214ENST00000596788 NFAT5O94916 1531 aa28.32■■■□□ 2.12
IRF3-214ENST00000596788 COL22A1Q8NFW1 1626 aaPredicted RBP28.32■■■□□ 2.12
IRF3-214ENST00000596788 MAP2P11137 1827 aaKnown RBP28.32■■■□□ 2.12
IRF3-214ENST00000596788 TNNT2P45379 298 aaPredicted RBP28.31■■■□□ 2.12
IRF3-214ENST00000596788 PPP2R1AP30153 589 aa28.29■■■□□ 2.12
IRF3-214ENST00000596788 NLRP13Q86W25 1043 aa28.29■■■□□ 2.12
IRF3-214ENST00000596788 LTN1O94822 1766 aa28.28■■■□□ 2.12
IRF3-214ENST00000596788 AATKQ6ZMQ8 1374 aa28.26■■■□□ 2.12
IRF3-214ENST00000596788 SHPRHQ149N8 1683 aa28.26■■■□□ 2.12
IRF3-214ENST00000596788 PEAK1Q9H792 1746 aa28.26■■■□□ 2.11
IRF3-214ENST00000596788 SMG6Q86US8 1419 aaKnown RBP28.26■■■□□ 2.11
IRF3-214ENST00000596788 PNPLA6Q8IY17 1366 aa28.25■■■□□ 2.11
IRF3-214ENST00000596788 FBLN1P23142 703 aa28.24■■■□□ 2.11
IRF3-214ENST00000596788 LRRC59Q96AG4 307 aaKnown RBP28.24■■■□□ 2.11
IRF3-214ENST00000596788 SOX12O15370 315 aa28.23■■■□□ 2.11
IRF3-214ENST00000596788 PLEKHG5O94827 1062 aa28.22■■■□□ 2.11
IRF3-214ENST00000596788 CCDC184Q52MB2 194 aa28.19■■■□□ 2.1
IRF3-214ENST00000596788 CABLES1Q8TDN4 633 aa28.19■■■□□ 2.1
IRF3-214ENST00000596788 CDK12Q9NYV4 1490 aaPredicted RBP28.19■■■□□ 2.1
IRF3-214ENST00000596788 CCER2I3L3R5 266 aa28.18■■■□□ 2.1
IRF3-214ENST00000596788 RRS1Q15050 365 aaKnown RBP28.18■■■□□ 2.1
IRF3-214ENST00000596788 KCNH5Q8NCM2 988 aa28.18■■■□□ 2.1
IRF3-214ENST00000596788 POLKQ9UBT6 870 aa28.18■■■□□ 2.1
IRF3-214ENST00000596788 GCP02774 474 aa28.17■■■□□ 2.1
IRF3-214ENST00000596788 EMILIN1Q9Y6C2 1016 aa28.17■■■□□ 2.1
IRF3-214ENST00000596788 COL3A1P02461 1466 aaPredicted RBP28.16■■■□□ 2.1
IRF3-214ENST00000596788 MTHFSP49914 203 aa28.16■■■□□ 2.1
IRF3-214ENST00000596788 MAP3K19Q56UN5 1328 aa28.16■■■□□ 2.1
IRF3-214ENST00000596788 HSPA1LP34931 641 aa28.15■■■□□ 2.1
IRF3-214ENST00000596788 JCADQ9P266 1359 aa28.12■■■□□ 2.09
IRF3-214ENST00000596788 COL18A1P39060 1754 aa28.12■■■□□ 2.09
IRF3-214ENST00000596788 MRS2Q9HD23 443 aa28.12■■■□□ 2.09
IRF3-214ENST00000596788 RTL1A6NKG5 1358 aa28.11■■■□□ 2.09
IRF3-214ENST00000596788 ABCC6O95255 1503 aa28.1■■■□□ 2.09
IRF3-214ENST00000596788 CPDO75976 1380 aa28.1■■■□□ 2.09
IRF3-214ENST00000596788 RGPD5Q99666 1765 aa28.09■■■□□ 2.09
IRF3-214ENST00000596788 PPM1GO15355 546 aaPredicted RBP28.09■■■□□ 2.09
IRF3-214ENST00000596788 ARHGEF25Q86VW2 580 aa28.09■■■□□ 2.09
IRF3-214ENST00000596788 FLT4P35916 1363 aa28.09■■■□□ 2.09
IRF3-214ENST00000596788 KIF24Q5T7B8 1368 aa28.09■■■□□ 2.09
IRF3-214ENST00000596788 INSRP06213 1382 aa28.08■■■□□ 2.09
IRF3-214ENST00000596788 KIAA0232Q92628 1395 aa28.08■■■□□ 2.09
IRF3-214ENST00000596788 LMO7Q8WWI1 1683 aa28.07■■■□□ 2.08
IRF3-214ENST00000596788 ZC3H6P61129 1189 aaKnown RBP28.07■■■□□ 2.08
IRF3-214ENST00000596788 HAP1P54257 671 aaPredicted RBP28.06■■■□□ 2.08
IRF3-214ENST00000596788 ZBTB7CA1YPR0 619 aa28.05■■■□□ 2.08
IRF3-214ENST00000596788 AMPHP49418 695 aa28.05■■■□□ 2.08
IRF3-214ENST00000596788 CFAP53Q96M91 514 aa28.05■■■□□ 2.08
IRF3-214ENST00000596788 HOXC9P31274 260 aa28.03■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 678.8 ms