RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 PRR36Q9H6K5 1346 aa15.43■□□□□ 0.06
CHMP2A-202ENST00000596708 EP400Q96L91 3159 aa15.43■□□□□ 0.06
CHMP2A-202ENST00000596708 ONECUT3O60422 494 aaPredicted RBP15.43■□□□□ 0.06
CHMP2A-202ENST00000596708 DEFB132Q7Z7B7 95 aa15.43■□□□□ 0.06
CHMP2A-202ENST00000596708 BTG4Q9NY30 223 aa15.43■□□□□ 0.06
CHMP2A-202ENST00000596708 FAM98CQ17RN3 349 aaKnown RBP15.41■□□□□ 0.06
CHMP2A-202ENST00000596708 CRYBG1Q9Y4K1 1723 aa15.4■□□□□ 0.06
CHMP2A-202ENST00000596708 HRCP23327 699 aa15.4■□□□□ 0.06
CHMP2A-202ENST00000596708 NUDT16Q96DE0 195 aaKnown RBP15.39■□□□□ 0.05
CHMP2A-202ENST00000596708 CDK19Q9BWU1 502 aa15.37■□□□□ 0.05
CHMP2A-202ENST00000596708 PRDM11Q9NQV5 511 aa15.37■□□□□ 0.05
CHMP2A-202ENST00000596708 BAG6P46379 1132 aa15.36■□□□□ 0.05
CHMP2A-202ENST00000596708 RGPD1P0DJD0 1748 aa15.36■□□□□ 0.05
CHMP2A-202ENST00000596708 KIAA1210Q9ULL0 1709 aa15.36■□□□□ 0.05
CHMP2A-202ENST00000596708 NUTM2GQ5VZR2 741 aa15.35■□□□□ 0.05
CHMP2A-202ENST00000596708 SPATA31A5Q5VU36 1347 aa15.35■□□□□ 0.05
CHMP2A-202ENST00000596708 SPATA31A7Q8IWB4 1347 aa15.35■□□□□ 0.05
CHMP2A-202ENST00000596708 PHRF1Q9P1Y6 1649 aaKnown RBP15.35■□□□□ 0.05
CHMP2A-202ENST00000596708 ATP7BP35670 1465 aa15.34■□□□□ 0.05
CHMP2A-202ENST00000596708 ZC3H6P61129 1189 aaKnown RBP15.33■□□□□ 0.04
CHMP2A-202ENST00000596708 CHRNA2Q15822 529 aa15.33■□□□□ 0.04
CHMP2A-202ENST00000596708 FAM182BQ5T319 152 aa15.33■□□□□ 0.04
CHMP2A-202ENST00000596708 STRN4Q9NRL3 753 aa15.33■□□□□ 0.04
CHMP2A-202ENST00000596708 TOPAZ1Q8N9V7 1692 aa15.32■□□□□ 0.04
CHMP2A-202ENST00000596708 CCDC61Q9Y6R9 512 aa15.32■□□□□ 0.04
CHMP2A-202ENST00000596708 ACEP12821 1306 aa15.32■□□□□ 0.04
CHMP2A-202ENST00000596708 KIAA0232Q92628 1395 aa15.32■□□□□ 0.04
CHMP2A-202ENST00000596708 EN1Q05925 392 aaPredicted RBP15.31■□□□□ 0.04
CHMP2A-202ENST00000596708 NBPF8Q3BBV2 869 aa15.31■□□□□ 0.04
CHMP2A-202ENST00000596708 PSDA5PKW4 1024 aaPredicted RBP15.3■□□□□ 0.04
CHMP2A-202ENST00000596708 EVA1CP58658 441 aa15.3■□□□□ 0.04
CHMP2A-202ENST00000596708 NBPF1Q3BBV0 1214 aa15.3■□□□□ 0.04
CHMP2A-202ENST00000596708 ABTB2Q8N961 1025 aa15.3■□□□□ 0.04
CHMP2A-202ENST00000596708 THSD7AQ9UPZ6 1657 aa15.3■□□□□ 0.04
CHMP2A-202ENST00000596708 SPATA31A1Q5TZJ5 1347 aa15.29■□□□□ 0.04
CHMP2A-202ENST00000596708 USP35Q9P2H5 1018 aa15.29■□□□□ 0.04
CHMP2A-202ENST00000596708 POLR3AO14802 1390 aaPredicted RBP15.28■□□□□ 0.04
CHMP2A-202ENST00000596708 PLEKHG3A1L390 1219 aa15.28■□□□□ 0.04
CHMP2A-202ENST00000596708 SRPK2P78362 688 aaKnown RBP15.28■□□□□ 0.04
CHMP2A-202ENST00000596708 TNS1Q9HBL0 1735 aaKnown RBP15.28■□□□□ 0.04
CHMP2A-202ENST00000596708 QRICH2Q9H0J4 1663 aa15.26■□□□□ 0.03
CHMP2A-202ENST00000596708 LRP5O75197 1615 aa15.26■□□□□ 0.03
CHMP2A-202ENST00000596708 CABP2Q9NPB3 220 aa15.26■□□□□ 0.03
CHMP2A-202ENST00000596708 CENPJQ9HC77 1338 aaPredicted RBP15.25■□□□□ 0.03
CHMP2A-202ENST00000596708 TRIM37O94972 964 aa15.25■□□□□ 0.03
CHMP2A-202ENST00000596708 FAM196AQ6ZSG2 479 aa15.25■□□□□ 0.03
CHMP2A-202ENST00000596708 NLRP13Q86W25 1043 aa15.25■□□□□ 0.03
CHMP2A-202ENST00000596708 PPIP5K1Q6PFW1 1433 aa15.25■□□□□ 0.03
CHMP2A-202ENST00000596708 SRCAPQ6ZRS2 3230 aa15.24■□□□□ 0.03
CHMP2A-202ENST00000596708 NRKQ7Z2Y5 1582 aa15.24■□□□□ 0.03
CHMP2A-202ENST00000596708 PDE3BQ13370 1112 aa15.24■□□□□ 0.03
CHMP2A-202ENST00000596708 EZH2Q15910 746 aaKnown RBP15.24■□□□□ 0.03
CHMP2A-202ENST00000596708 SSH2Q76I76 1423 aa15.24■□□□□ 0.03
CHMP2A-202ENST00000596708 CAMTA1Q9Y6Y1 1673 aa15.23■□□□□ 0.03
CHMP2A-202ENST00000596708 ZBTB7CA1YPR0 619 aa15.23■□□□□ 0.03
CHMP2A-202ENST00000596708 LARP1Q6PKG0 1096 aaKnown RBP15.23■□□□□ 0.03
CHMP2A-202ENST00000596708 APBA3O96018 575 aa15.22■□□□□ 0.03
CHMP2A-202ENST00000596708 GCP02774 474 aa15.22■□□□□ 0.03
CHMP2A-202ENST00000596708 R3HDM1Q15032 1099 aaKnown RBP15.22■□□□□ 0.03
CHMP2A-202ENST00000596708 BARGINQ6ZT62 677 aa15.22■□□□□ 0.03
CHMP2A-202ENST00000596708 TCP11L2Q8N4U5 519 aa15.21■□□□□ 0.03
CHMP2A-202ENST00000596708 LMO7Q8WWI1 1683 aa15.21■□□□□ 0.03
CHMP2A-202ENST00000596708 USP19O94966 1318 aa15.2■□□□□ 0.02
CHMP2A-202ENST00000596708 DISP2A7MBM2 1401 aa15.2■□□□□ 0.02
CHMP2A-202ENST00000596708 CABP1Q9NZU7 370 aa15.2■□□□□ 0.02
CHMP2A-202ENST00000596708 CPDO75976 1380 aa15.2■□□□□ 0.02
CHMP2A-202ENST00000596708 RGPD5Q99666 1765 aa15.19■□□□□ 0.02
CHMP2A-202ENST00000596708 NLRP6P59044 892 aa15.19■□□□□ 0.02
CHMP2A-202ENST00000596708 L3MBTL2Q969R5 705 aa15.19■□□□□ 0.02
CHMP2A-202ENST00000596708 CAMKK2Q96RR4 588 aa15.19■□□□□ 0.02
CHMP2A-202ENST00000596708 THRAP3Q9Y2W1 955 aaKnown RBP15.18■□□□□ 0.02
CHMP2A-202ENST00000596708 BRD4O60885 1362 aaPredicted RBP15.18■□□□□ 0.02
CHMP2A-202ENST00000596708 PARP4Q9UKK3 1724 aaKnown RBP15.17■□□□□ 0.02
CHMP2A-202ENST00000596708 SBF2Q86WG5 1849 aa15.17■□□□□ 0.02
CHMP2A-202ENST00000596708 KAT6BQ8WYB5 2073 aa15.17■□□□□ 0.02
CHMP2A-202ENST00000596708 TRPM1Q7Z4N2 1603 aa15.17■□□□□ 0.02
CHMP2A-202ENST00000596708 EVC2Q86UK5 1308 aa15.17■□□□□ 0.02
CHMP2A-202ENST00000596708 RREB1Q92766 1687 aa15.16■□□□□ 0.02
CHMP2A-202ENST00000596708 NEUROD1Q13562 356 aa15.16■□□□□ 0.02
CHMP2A-202ENST00000596708 SIN3AQ96ST3 1273 aa15.16■□□□□ 0.02
CHMP2A-202ENST00000596708 USP6P35125 1406 aa15.16■□□□□ 0.02
CHMP2A-202ENST00000596708 AKAP12Q02952 1782 aa15.16■□□□□ 0.02
CHMP2A-202ENST00000596708 COL5A2P05997 1499 aaPredicted RBP15.15■□□□□ 0.02
CHMP2A-202ENST00000596708 NUP188Q5SRE5 1749 aa15.14■□□□□ 0.01
CHMP2A-202ENST00000596708 PARD3Q8TEW0 1356 aa15.14■□□□□ 0.01
CHMP2A-202ENST00000596708 PIK3C2AO00443 1686 aa15.14■□□□□ 0.01
CHMP2A-202ENST00000596708 NBPF14Q5TI25 921 aa15.14■□□□□ 0.01
CHMP2A-202ENST00000596708 TOM1L2Q6ZVM7 507 aa15.14■□□□□ 0.01
CHMP2A-202ENST00000596708 CRB1P82279 1406 aa15.14■□□□□ 0.01
CHMP2A-202ENST00000596708 COL18A1P39060 1754 aa15.13■□□□□ 0.01
CHMP2A-202ENST00000596708 WNK3Q9BYP7 1800 aa15.13■□□□□ 0.01
CHMP2A-202ENST00000596708 SLIT3O75094 1523 aa15.12■□□□□ 0.01
CHMP2A-202ENST00000596708 ZNF692Q9BU19 519 aaPredicted RBP15.12■□□□□ 0.01
CHMP2A-202ENST00000596708 ROCK2O75116 1388 aaKnown RBP15.11■□□□□ 0.01
CHMP2A-202ENST00000596708 AATKQ6ZMQ8 1374 aa15.11■□□□□ 0.01
CHMP2A-202ENST00000596708 C11orf95C9JLR9 678 aaPredicted RBP15.11■□□□□ 0.01
CHMP2A-202ENST00000596708 SOX12O15370 315 aa15.11■□□□□ 0.01
CHMP2A-202ENST00000596708 DDB1Q16531 1140 aa15.11■□□□□ 0.01
CHMP2A-202ENST00000596708 TTC21BQ7Z4L5 1316 aa15.1■□□□□ 0.01
CHMP2A-202ENST00000596708 LRRC37A3O60309 1634 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms