RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 TRPC5Q9UL62 973 aaPredicted RBP18.6■□□□□ 0.57
USE1-207ENST00000596136 ATRNO75882 1429 aa18.59■□□□□ 0.57
USE1-207ENST00000596136 PCGF6Q9BYE7 350 aa18.59■□□□□ 0.57
USE1-207ENST00000596136 PPIP5K1Q6PFW1 1433 aa18.58■□□□□ 0.57
USE1-207ENST00000596136 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.57■□□□□ 0.56
USE1-207ENST00000596136 TIMELESSQ9UNS1 1208 aa18.57■□□□□ 0.56
USE1-207ENST00000596136 CRYBG1Q9Y4K1 1723 aa18.57■□□□□ 0.56
USE1-207ENST00000596136 BRD4O60885 1362 aaPredicted RBP18.56■□□□□ 0.56
USE1-207ENST00000596136 PAK3O75914 559 aaPredicted RBP18.56■□□□□ 0.56
USE1-207ENST00000596136 UNC5CLQ8IV45 518 aa18.56■□□□□ 0.56
USE1-207ENST00000596136 HAP1P54257 671 aaPredicted RBP18.55■□□□□ 0.56
USE1-207ENST00000596136 CABP1Q9NZU7 370 aa18.55■□□□□ 0.56
USE1-207ENST00000596136 FAM83GA6ND36 823 aa18.54■□□□□ 0.56
USE1-207ENST00000596136 NWD2Q9ULI1 1742 aa18.54■□□□□ 0.56
USE1-207ENST00000596136 RGS12O14924 1447 aa18.53■□□□□ 0.56
USE1-207ENST00000596136 GJD4Q96KN9 370 aaPredicted RBP18.52■□□□□ 0.56
USE1-207ENST00000596136 ATAD2Q6PL18 1390 aa18.52■□□□□ 0.55
USE1-207ENST00000596136 SSH2Q76I76 1423 aa18.51■□□□□ 0.55
USE1-207ENST00000596136 PLCH1Q4KWH8 1693 aa18.5■□□□□ 0.55
USE1-207ENST00000596136 USP6P35125 1406 aa18.5■□□□□ 0.55
USE1-207ENST00000596136 PLEKHG5O94827 1062 aa18.5■□□□□ 0.55
USE1-207ENST00000596136 PUS7Q96PZ0 661 aaKnown RBP18.5■□□□□ 0.55
USE1-207ENST00000596136 VPS72Q15906 364 aa18.49■□□□□ 0.55
USE1-207ENST00000596136 ABTB2Q8N961 1025 aa18.49■□□□□ 0.55
USE1-207ENST00000596136 ZNF692Q9BU19 519 aaPredicted RBP18.49■□□□□ 0.55
USE1-207ENST00000596136 COL14A1Q05707 1796 aaKnown RBP18.49■□□□□ 0.55
USE1-207ENST00000596136 USP19O94966 1318 aa18.49■□□□□ 0.55
USE1-207ENST00000596136 TESK2Q96S53 571 aa18.48■□□□□ 0.55
USE1-207ENST00000596136 PHRF1Q9P1Y6 1649 aaKnown RBP18.48■□□□□ 0.55
USE1-207ENST00000596136 CPSF1Q10570 1443 aaKnown RBP18.48■□□□□ 0.55
USE1-207ENST00000596136 GLI3P10071 1580 aa18.47■□□□□ 0.55
USE1-207ENST00000596136 SLC24A1O60721 1099 aa18.47■□□□□ 0.55
USE1-207ENST00000596136 AKAP12Q02952 1782 aa18.46■□□□□ 0.55
USE1-207ENST00000596136 ST20-MTHFSA0A0A6YYL1 179 aa18.46■□□□□ 0.55
USE1-207ENST00000596136 NUTM2GQ5VZR2 741 aa18.46■□□□□ 0.55
USE1-207ENST00000596136 NLRP13Q86W25 1043 aa18.46■□□□□ 0.55
USE1-207ENST00000596136 UPF1Q92900 1129 aaKnown RBP eCLIP18.46■□□□□ 0.55
USE1-207ENST00000596136 NRAPQ86VF7 1730 aa18.46■□□□□ 0.55
USE1-207ENST00000596136 ONECUT3O60422 494 aaPredicted RBP18.45■□□□□ 0.54
USE1-207ENST00000596136 BTG4Q9NY30 223 aa18.45■□□□□ 0.54
USE1-207ENST00000596136 KIAA0232Q92628 1395 aa18.44■□□□□ 0.54
USE1-207ENST00000596136 PRDM11Q9NQV5 511 aa18.44■□□□□ 0.54
USE1-207ENST00000596136 CPDO75976 1380 aa18.43■□□□□ 0.54
USE1-207ENST00000596136 NRKQ7Z2Y5 1582 aa18.43■□□□□ 0.54
USE1-207ENST00000596136 TTC21BQ7Z4L5 1316 aa18.43■□□□□ 0.54
USE1-207ENST00000596136 GCP02774 474 aa18.42■□□□□ 0.54
USE1-207ENST00000596136 TTC21AQ8NDW8 1320 aa18.42■□□□□ 0.54
USE1-207ENST00000596136 PIK3C2AO00443 1686 aa18.41■□□□□ 0.54
USE1-207ENST00000596136 CD163L1Q9NR16 1453 aa18.41■□□□□ 0.54
USE1-207ENST00000596136 NLRP6P59044 892 aa18.41■□□□□ 0.54
USE1-207ENST00000596136 ZC3H6P61129 1189 aaKnown RBP18.41■□□□□ 0.54
USE1-207ENST00000596136 SLIT3O75094 1523 aa18.4■□□□□ 0.54
USE1-207ENST00000596136 KTN1Q86UP2 1357 aaKnown RBP18.4■□□□□ 0.54
USE1-207ENST00000596136 USP47Q96K76 1375 aa18.4■□□□□ 0.54
USE1-207ENST00000596136 MON2Q7Z3U7 1717 aa18.4■□□□□ 0.54
USE1-207ENST00000596136 CHRNA2Q15822 529 aa18.39■□□□□ 0.53
USE1-207ENST00000596136 CCER1Q8TC90 406 aaPredicted RBP18.39■□□□□ 0.53
USE1-207ENST00000596136 EP400Q96L91 3159 aa18.38■□□□□ 0.53
USE1-207ENST00000596136 SLC12A5Q9H2X9 1139 aa18.38■□□□□ 0.53
USE1-207ENST00000596136 SPATA31A5Q5VU36 1347 aa18.38■□□□□ 0.53
USE1-207ENST00000596136 SPATA31A7Q8IWB4 1347 aa18.38■□□□□ 0.53
USE1-207ENST00000596136 LMO7Q8WWI1 1683 aa18.38■□□□□ 0.53
USE1-207ENST00000596136 NINLQ9Y2I6 1382 aa18.37■□□□□ 0.53
USE1-207ENST00000596136 SEPT12Q8IYM1 358 aa18.36■□□□□ 0.53
USE1-207ENST00000596136 TMC1Q8TDI8 760 aa18.36■□□□□ 0.53
USE1-207ENST00000596136 CCDC9Q9Y3X0 531 aaKnown RBP18.36■□□□□ 0.53
USE1-207ENST00000596136 CAMTA1Q9Y6Y1 1673 aa18.36■□□□□ 0.53
USE1-207ENST00000596136 BRWD3Q6RI45 1802 aa18.35■□□□□ 0.53
USE1-207ENST00000596136 USP31Q70CQ4 1352 aa18.35■□□□□ 0.53
USE1-207ENST00000596136 HDGFL2Q7Z4V5 671 aaPredicted RBP18.35■□□□□ 0.53
USE1-207ENST00000596136 TERF2IPQ9NYB0 399 aa18.35■□□□□ 0.53
USE1-207ENST00000596136 TMF1P82094 1093 aa18.34■□□□□ 0.53
USE1-207ENST00000596136 USP54Q70EL1 1684 aa18.34■□□□□ 0.53
USE1-207ENST00000596136 EDC4Q6P2E9 1401 aaKnown RBP18.33■□□□□ 0.53
USE1-207ENST00000596136 A0A1W2PP64 1363 aa18.33■□□□□ 0.53
USE1-207ENST00000596136 AATKQ6ZMQ8 1374 aa18.33■□□□□ 0.53
USE1-207ENST00000596136 SPATA31A1Q5TZJ5 1347 aa18.33■□□□□ 0.53
USE1-207ENST00000596136 KCNH5Q8NCM2 988 aa18.33■□□□□ 0.52
USE1-207ENST00000596136 ARHGEF25Q86VW2 580 aa18.32■□□□□ 0.52
USE1-207ENST00000596136 COL18A1P39060 1754 aa18.32■□□□□ 0.52
USE1-207ENST00000596136 FAM98CQ17RN3 349 aaKnown RBP18.31■□□□□ 0.52
USE1-207ENST00000596136 CCDC125Q86Z20 511 aa18.3■□□□□ 0.52
USE1-207ENST00000596136 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.3■□□□□ 0.52
USE1-207ENST00000596136 STRN4Q9NRL3 753 aa18.3■□□□□ 0.52
USE1-207ENST00000596136 COL5A2P05997 1499 aaPredicted RBP18.3■□□□□ 0.52
USE1-207ENST00000596136 THSD7AQ9UPZ6 1657 aa18.3■□□□□ 0.52
USE1-207ENST00000596136 NFAT5O94916 1531 aa18.29■□□□□ 0.52
USE1-207ENST00000596136 EVA1CP58658 441 aa18.29■□□□□ 0.52
USE1-207ENST00000596136 CDCA8Q53HL2 280 aa18.29■□□□□ 0.52
USE1-207ENST00000596136 BARGINQ6ZT62 677 aa18.29■□□□□ 0.52
USE1-207ENST00000596136 KRT27Q7Z3Y8 459 aa18.29■□□□□ 0.52
USE1-207ENST00000596136 ZRANB1Q9UGI0 708 aa18.29■□□□□ 0.52
USE1-207ENST00000596136 LARP1Q6PKG0 1096 aaKnown RBP18.28■□□□□ 0.52
USE1-207ENST00000596136 NME9Q86XW9 330 aa18.28■□□□□ 0.52
USE1-207ENST00000596136 ANKRD36BQ8N2N9 1353 aa18.28■□□□□ 0.52
USE1-207ENST00000596136 AXIN2Q9Y2T1 843 aa18.27■□□□□ 0.52
USE1-207ENST00000596136 THRAP3Q9Y2W1 955 aaKnown RBP18.26■□□□□ 0.51
USE1-207ENST00000596136 OVOS2A0A0J9YW53 1432 aa18.25■□□□□ 0.51
USE1-207ENST00000596136 OVOS2Q6IE36 1432 aa18.25■□□□□ 0.51
USE1-207ENST00000596136 ABCC6O95255 1503 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms