RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 BAG6P46379 1132 aa14.69□□□□□ -0.06
LIG1-209ENST00000596104 MYT1Q01538 1121 aa14.69□□□□□ -0.06
LIG1-209ENST00000596104 DCAF11Q8TEB1 546 aa14.69□□□□□ -0.06
LIG1-209ENST00000596104 KDM2AQ9Y2K7 1162 aa14.69□□□□□ -0.06
LIG1-209ENST00000596104 STAC3Q96MF2 364 aa14.68□□□□□ -0.06
LIG1-209ENST00000596104 NGDNQ8NEJ9 315 aaKnown RBP14.67□□□□□ -0.06
LIG1-209ENST00000596104 COL14A1Q05707 1796 aaKnown RBP14.67□□□□□ -0.06
LIG1-209ENST00000596104 ATP7BP35670 1465 aa14.66□□□□□ -0.06
LIG1-209ENST00000596104 PRDM11Q9NQV5 511 aa14.66□□□□□ -0.06
LIG1-209ENST00000596104 PSDA5PKW4 1024 aaPredicted RBP14.65□□□□□ -0.06
LIG1-209ENST00000596104 PAK3O75914 559 aaPredicted RBP14.65□□□□□ -0.06
LIG1-209ENST00000596104 HRCP23327 699 aa14.65□□□□□ -0.06
LIG1-209ENST00000596104 FAM182BQ5T319 152 aa14.65□□□□□ -0.06
LIG1-209ENST00000596104 LRP5O75197 1615 aa14.65□□□□□ -0.06
LIG1-209ENST00000596104 DISP2A7MBM2 1401 aa14.65□□□□□ -0.06
LIG1-209ENST00000596104 CRYBG1Q9Y4K1 1723 aa14.64□□□□□ -0.07
LIG1-209ENST00000596104 KIAA0232Q92628 1395 aa14.64□□□□□ -0.07
LIG1-209ENST00000596104 EN1Q05925 392 aaPredicted RBP14.64□□□□□ -0.07
LIG1-209ENST00000596104 NUDT16Q96DE0 195 aaKnown RBP14.64□□□□□ -0.07
LIG1-209ENST00000596104 THSD7AQ9UPZ6 1657 aa14.64□□□□□ -0.07
LIG1-209ENST00000596104 SPATA31A1Q5TZJ5 1347 aa14.63□□□□□ -0.07
LIG1-209ENST00000596104 CHRNA2Q15822 529 aa14.62□□□□□ -0.07
LIG1-209ENST00000596104 POLR3AO14802 1390 aaPredicted RBP14.61□□□□□ -0.07
LIG1-209ENST00000596104 CDK19Q9BWU1 502 aa14.6□□□□□ -0.07
LIG1-209ENST00000596104 ARHGEF28Q8N1W1 1705 aaKnown RBP14.59□□□□□ -0.07
LIG1-209ENST00000596104 ZC3H6P61129 1189 aaKnown RBP14.59□□□□□ -0.07
LIG1-209ENST00000596104 STRN4Q9NRL3 753 aa14.59□□□□□ -0.07
LIG1-209ENST00000596104 CCDC61Q9Y6R9 512 aa14.59□□□□□ -0.07
LIG1-209ENST00000596104 ACEP12821 1306 aa14.59□□□□□ -0.07
LIG1-209ENST00000596104 PLEKHG3A1L390 1219 aa14.58□□□□□ -0.08
LIG1-209ENST00000596104 R3HDM1Q15032 1099 aaKnown RBP14.58□□□□□ -0.08
LIG1-209ENST00000596104 EZH2Q15910 746 aaKnown RBP14.58□□□□□ -0.08
LIG1-209ENST00000596104 NBPF8Q3BBV2 869 aa14.58□□□□□ -0.08
LIG1-209ENST00000596104 NUTM2GQ5VZR2 741 aa14.58□□□□□ -0.08
LIG1-209ENST00000596104 CAMKK2Q96RR4 588 aa14.58□□□□□ -0.08
LIG1-209ENST00000596104 RGPD1P0DJD0 1748 aa14.58□□□□□ -0.08
LIG1-209ENST00000596104 PHRF1Q9P1Y6 1649 aaKnown RBP14.57□□□□□ -0.08
LIG1-209ENST00000596104 TRIM37O94972 964 aa14.57□□□□□ -0.08
LIG1-209ENST00000596104 FAM196AQ6ZSG2 479 aa14.57□□□□□ -0.08
LIG1-209ENST00000596104 BARGINQ6ZT62 677 aa14.57□□□□□ -0.08
LIG1-209ENST00000596104 SSH2Q76I76 1423 aa14.57□□□□□ -0.08
LIG1-209ENST00000596104 TNS1Q9HBL0 1735 aaKnown RBP14.56□□□□□ -0.08
LIG1-209ENST00000596104 USP19O94966 1318 aa14.56□□□□□ -0.08
LIG1-209ENST00000596104 CPDO75976 1380 aa14.56□□□□□ -0.08
LIG1-209ENST00000596104 ITSN1Q15811 1721 aa14.55□□□□□ -0.08
LIG1-209ENST00000596104 TOPAZ1Q8N9V7 1692 aa14.55□□□□□ -0.08
LIG1-209ENST00000596104 CAMTA1Q9Y6Y1 1673 aa14.55□□□□□ -0.08
LIG1-209ENST00000596104 NBPF1Q3BBV0 1214 aa14.54□□□□□ -0.08
LIG1-209ENST00000596104 LARP1Q6PKG0 1096 aaKnown RBP14.54□□□□□ -0.08
LIG1-209ENST00000596104 USP35Q9P2H5 1018 aa14.54□□□□□ -0.08
LIG1-209ENST00000596104 PARD3Q8TEW0 1356 aa14.54□□□□□ -0.08
LIG1-209ENST00000596104 NRKQ7Z2Y5 1582 aa14.54□□□□□ -0.08
LIG1-209ENST00000596104 APBA3O96018 575 aa14.53□□□□□ -0.08
LIG1-209ENST00000596104 EVA1CP58658 441 aa14.53□□□□□ -0.08
LIG1-209ENST00000596104 ABTB2Q8N961 1025 aa14.53□□□□□ -0.08
LIG1-209ENST00000596104 TCP11L2Q8N4U5 519 aa14.52□□□□□ -0.09
LIG1-209ENST00000596104 LMO7Q8WWI1 1683 aa14.52□□□□□ -0.09
LIG1-209ENST00000596104 GCP02774 474 aa14.51□□□□□ -0.09
LIG1-209ENST00000596104 PDE3BQ13370 1112 aa14.51□□□□□ -0.09
LIG1-209ENST00000596104 NLRP13Q86W25 1043 aa14.5□□□□□ -0.09
LIG1-209ENST00000596104 THRAP3Q9Y2W1 955 aaKnown RBP14.5□□□□□ -0.09
LIG1-209ENST00000596104 PPIP5K1Q6PFW1 1433 aa14.49□□□□□ -0.09
LIG1-209ENST00000596104 KIAA1210Q9ULL0 1709 aa14.49□□□□□ -0.09
LIG1-209ENST00000596104 CENPJQ9HC77 1338 aaPredicted RBP14.49□□□□□ -0.09
LIG1-209ENST00000596104 SRPK2P78362 688 aaKnown RBP14.49□□□□□ -0.09
LIG1-209ENST00000596104 COL5A2P05997 1499 aaPredicted RBP14.49□□□□□ -0.09
LIG1-209ENST00000596104 BRD4O60885 1362 aaPredicted RBP14.48□□□□□ -0.09
LIG1-209ENST00000596104 CABP2Q9NPB3 220 aa14.48□□□□□ -0.09
LIG1-209ENST00000596104 USP6P35125 1406 aa14.47□□□□□ -0.09
LIG1-209ENST00000596104 AATKQ6ZMQ8 1374 aa14.46□□□□□ -0.1
LIG1-209ENST00000596104 CRB1P82279 1406 aa14.45□□□□□ -0.1
LIG1-209ENST00000596104 CABP1Q9NZU7 370 aa14.45□□□□□ -0.1
LIG1-209ENST00000596104 RREB1Q92766 1687 aa14.45□□□□□ -0.1
LIG1-209ENST00000596104 NLRP6P59044 892 aa14.44□□□□□ -0.1
LIG1-209ENST00000596104 NBPF14Q5TI25 921 aa14.44□□□□□ -0.1
LIG1-209ENST00000596104 SLIT3O75094 1523 aa14.44□□□□□ -0.1
LIG1-209ENST00000596104 C11orf95C9JLR9 678 aaPredicted RBP14.43□□□□□ -0.1
LIG1-209ENST00000596104 NUP188Q5SRE5 1749 aa14.43□□□□□ -0.1
LIG1-209ENST00000596104 OVOS2A0A0G2JMS6 1433 aa14.42□□□□□ -0.1
LIG1-209ENST00000596104 OVOS2A0A0J9YW53 1432 aa14.42□□□□□ -0.1
LIG1-209ENST00000596104 OVOS2Q6IE36 1432 aa14.42□□□□□ -0.1
LIG1-209ENST00000596104 PARP4Q9UKK3 1724 aaKnown RBP14.42□□□□□ -0.1
LIG1-209ENST00000596104 ZBTB7CA1YPR0 619 aa14.41□□□□□ -0.1
LIG1-209ENST00000596104 AXIN2Q9Y2T1 843 aa14.41□□□□□ -0.1
LIG1-209ENST00000596104 PEAK1Q9H792 1746 aa14.41□□□□□ -0.1
LIG1-209ENST00000596104 PLSCR1O15162 318 aa14.4□□□□□ -0.1
LIG1-209ENST00000596104 DDB1Q16531 1140 aa14.4□□□□□ -0.1
LIG1-209ENST00000596104 L3MBTL2Q969R5 705 aa14.4□□□□□ -0.1
LIG1-209ENST00000596104 WDR17Q8IZU2 1322 aa14.4□□□□□ -0.1
LIG1-209ENST00000596104 TOM1L2Q6ZVM7 507 aa14.39□□□□□ -0.11
LIG1-209ENST00000596104 PTF1AQ7RTS3 328 aa14.39□□□□□ -0.11
LIG1-209ENST00000596104 ARHGEF25Q86VW2 580 aa14.39□□□□□ -0.11
LIG1-209ENST00000596104 SPON1Q9HCB6 807 aa14.39□□□□□ -0.11
LIG1-209ENST00000596104 CPSF1Q10570 1443 aaKnown RBP14.39□□□□□ -0.11
LIG1-209ENST00000596104 EVC2Q86UK5 1308 aa14.39□□□□□ -0.11
LIG1-209ENST00000596104 LRRC37A3O60309 1634 aa14.38□□□□□ -0.11
LIG1-209ENST00000596104 KCNQ2O43526 872 aa14.38□□□□□ -0.11
LIG1-209ENST00000596104 BCL11BQ9C0K0 894 aaPredicted RBP14.38□□□□□ -0.11
LIG1-209ENST00000596104 ANO8Q9HCE9 1232 aaPredicted RBP14.38□□□□□ -0.11
LIG1-209ENST00000596104 QRICH2Q9H0J4 1663 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms