RNA–Protein interactions for RNA: ENST00000595786.5

ZNF558-203, Transcript of zinc finger protein 558, humanhuman

TSL 3

Gene ZNF558, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-203ENST00000595786 NWD2Q9ULI1 1742 aa36.35■■■■□ 3.41
ZNF558-203ENST00000595786 FAM83GA6ND36 823 aa36.35■■■■□ 3.41
ZNF558-203ENST00000595786 PLEKHG5O94827 1062 aa36.35■■■■□ 3.41
ZNF558-203ENST00000595786 ROCK2O75116 1388 aaKnown RBP36.35■■■■□ 3.41
ZNF558-203ENST00000595786 VPS72Q15906 364 aa36.33■■■■□ 3.41
ZNF558-203ENST00000595786 QRICH2Q9H0J4 1663 aa36.32■■■■□ 3.4
ZNF558-203ENST00000595786 ATAD2Q6PL18 1390 aa36.31■■■■□ 3.4
ZNF558-203ENST00000595786 RALGAPBQ86X10 1494 aa36.31■■■■□ 3.4
ZNF558-203ENST00000595786 CABP2Q9NPB3 220 aa36.29■■■■□ 3.4
ZNF558-203ENST00000595786 PLCH1Q4KWH8 1693 aa36.29■■■■□ 3.4
ZNF558-203ENST00000595786 EVC2Q86UK5 1308 aa36.28■■■■□ 3.4
ZNF558-203ENST00000595786 BRD4O60885 1362 aaPredicted RBP36.27■■■■□ 3.4
ZNF558-203ENST00000595786 PPIP5K1Q6PFW1 1433 aa36.26■■■■□ 3.4
ZNF558-203ENST00000595786 GLI3P10071 1580 aa36.26■■■■□ 3.39
ZNF558-203ENST00000595786 CRYBG1Q9Y4K1 1723 aa36.24■■■■□ 3.39
ZNF558-203ENST00000595786 TONSLQ96HA7 1378 aa36.24■■■■□ 3.39
ZNF558-203ENST00000595786 COL14A1Q05707 1796 aaKnown RBP36.23■■■■□ 3.39
ZNF558-203ENST00000595786 ONECUT3O60422 494 aaPredicted RBP36.22■■■■□ 3.39
ZNF558-203ENST00000595786 BTG4Q9NY30 223 aa36.22■■■■□ 3.39
ZNF558-203ENST00000595786 ABTB2Q8N961 1025 aa36.19■■■■□ 3.38
ZNF558-203ENST00000595786 CABP1Q9NZU7 370 aa36.19■■■■□ 3.38
ZNF558-203ENST00000595786 PRDM11Q9NQV5 511 aa36.18■■■■□ 3.38
ZNF558-203ENST00000595786 CCDC9Q9Y3X0 531 aaKnown RBP36.18■■■■□ 3.38
ZNF558-203ENST00000595786 CCDC125Q86Z20 511 aa36.15■■■■□ 3.38
ZNF558-203ENST00000595786 CARD11Q9BXL7 1154 aa36.15■■■■□ 3.38
ZNF558-203ENST00000595786 SBNO2Q9Y2G9 1366 aa36.15■■■■□ 3.38
ZNF558-203ENST00000595786 NRAPQ86VF7 1730 aa36.14■■■■□ 3.38
ZNF558-203ENST00000595786 NLRP13Q86W25 1043 aa36.14■■■■□ 3.38
ZNF558-203ENST00000595786 SEPT12Q8IYM1 358 aa36.14■■■■□ 3.38
ZNF558-203ENST00000595786 NUTM2GQ5VZR2 741 aa36.13■■■■□ 3.37
ZNF558-203ENST00000595786 PHRF1Q9P1Y6 1649 aaKnown RBP36.12■■■■□ 3.37
ZNF558-203ENST00000595786 KIAA0232Q92628 1395 aa36.12■■■■□ 3.37
ZNF558-203ENST00000595786 USP19O94966 1318 aa36.11■■■■□ 3.37
ZNF558-203ENST00000595786 USP6P35125 1406 aa36.1■■■■□ 3.37
ZNF558-203ENST00000595786 ZNF692Q9BU19 519 aaPredicted RBP36.1■■■■□ 3.37
ZNF558-203ENST00000595786 ZC3H6P61129 1189 aaKnown RBP36.08■■■■□ 3.37
ZNF558-203ENST00000595786 SPATA31A5Q5VU36 1347 aa36.07■■■■□ 3.36
ZNF558-203ENST00000595786 SPATA31A7Q8IWB4 1347 aa36.07■■■■□ 3.36
ZNF558-203ENST00000595786 CPDO75976 1380 aa36.06■■■■□ 3.36
ZNF558-203ENST00000595786 SSH2Q76I76 1423 aa36.04■■■■□ 3.36
ZNF558-203ENST00000595786 BRWD3Q6RI45 1802 aa36.04■■■■□ 3.36
ZNF558-203ENST00000595786 GCP02774 474 aa36.03■■■■□ 3.36
ZNF558-203ENST00000595786 CHRNA2Q15822 529 aa36.03■■■■□ 3.36
ZNF558-203ENST00000595786 KRT27Q7Z3Y8 459 aa36.02■■■■□ 3.36
ZNF558-203ENST00000595786 FAM98CQ17RN3 349 aaKnown RBP36.01■■■■□ 3.36
ZNF558-203ENST00000595786 NRKQ7Z2Y5 1582 aa36.01■■■■□ 3.35
ZNF558-203ENST00000595786 EP400Q96L91 3159 aa36.01■■■■□ 3.35
ZNF558-203ENST00000595786 NLRP6P59044 892 aa35.99■■■■□ 3.35
ZNF558-203ENST00000595786 PUS7Q96PZ0 661 aaKnown RBP35.97■■■■□ 3.35
ZNF558-203ENST00000595786 CPSF1Q10570 1443 aaKnown RBP35.97■■■■□ 3.35
ZNF558-203ENST00000595786 SPATA31A1Q5TZJ5 1347 aa35.96■■■■□ 3.35
ZNF558-203ENST00000595786 BLMP54132 1417 aaPredicted RBP35.95■■■■□ 3.35
ZNF558-203ENST00000595786 A0A0G2JS52 829 aa35.95■■■■□ 3.35
ZNF558-203ENST00000595786 SLC24A1O60721 1099 aa35.95■■■■□ 3.35
ZNF558-203ENST00000595786 EVA1CP58658 441 aa35.95■■■■□ 3.35
ZNF558-203ENST00000595786 MYT1Q01538 1121 aa35.95■■■■□ 3.35
ZNF558-203ENST00000595786 TTC21BQ7Z4L5 1316 aa35.94■■■■□ 3.34
ZNF558-203ENST00000595786 TTC21AQ8NDW8 1320 aa35.94■■■■□ 3.34
ZNF558-203ENST00000595786 STRN4Q9NRL3 753 aa35.94■■■■□ 3.34
ZNF558-203ENST00000595786 AKAP12Q02952 1782 aa35.93■■■■□ 3.34
ZNF558-203ENST00000595786 SLIT3O75094 1523 aa35.91■■■■□ 3.34
ZNF558-203ENST00000595786 CAMTA1Q9Y6Y1 1673 aa35.91■■■■□ 3.34
ZNF558-203ENST00000595786 LMO7Q8WWI1 1683 aa35.9■■■■□ 3.34
ZNF558-203ENST00000595786 KTN1Q86UP2 1357 aaKnown RBP35.89■■■■□ 3.34
ZNF558-203ENST00000595786 TIMELESSQ9UNS1 1208 aa35.88■■■■□ 3.33
ZNF558-203ENST00000595786 PIK3C2AO00443 1686 aa35.88■■■■□ 3.33
ZNF558-203ENST00000595786 CLSPNQ9HAW4 1339 aa35.87■■■■□ 3.33
ZNF558-203ENST00000595786 KCNH5Q8NCM2 988 aa35.87■■■■□ 3.33
ZNF558-203ENST00000595786 THSD7AQ9UPZ6 1657 aa35.87■■■■□ 3.33
ZNF558-203ENST00000595786 SF3B2Q13435 895 aaKnown RBP35.86■■■■□ 3.33
ZNF558-203ENST00000595786 BARGINQ6ZT62 677 aa35.86■■■■□ 3.33
ZNF558-203ENST00000595786 AATKQ6ZMQ8 1374 aa35.86■■■■□ 3.33
ZNF558-203ENST00000595786 LARP1Q6PKG0 1096 aaKnown RBP35.83■■■■□ 3.33
ZNF558-203ENST00000595786 TESK2Q96S53 571 aa35.83■■■■□ 3.33
ZNF558-203ENST00000595786 ST20-MTHFSA0A0A6YYL1 179 aa35.82■■■■□ 3.32
ZNF558-203ENST00000595786 THRAP3Q9Y2W1 955 aaKnown RBP35.82■■■■□ 3.32
ZNF558-203ENST00000595786 HDGFL2Q7Z4V5 671 aaPredicted RBP35.81■■■■□ 3.32
ZNF558-203ENST00000595786 MON2Q7Z3U7 1717 aa35.8■■■■□ 3.32
ZNF558-203ENST00000595786 TCP11L2Q8N4U5 519 aa35.8■■■■□ 3.32
ZNF558-203ENST00000595786 TMC1Q8TDI8 760 aa35.8■■■■□ 3.32
ZNF558-203ENST00000595786 COL5A2P05997 1499 aaPredicted RBP35.8■■■■□ 3.32
ZNF558-203ENST00000595786 CD163L1Q9NR16 1453 aa35.79■■■■□ 3.32
ZNF558-203ENST00000595786 ARHGEF25Q86VW2 580 aa35.78■■■■□ 3.32
ZNF558-203ENST00000595786 SLC12A5Q9H2X9 1139 aa35.78■■■■□ 3.32
ZNF558-203ENST00000595786 TERF2IPQ9NYB0 399 aa35.78■■■■□ 3.32
ZNF558-203ENST00000595786 USP35Q9P2H5 1018 aa35.78■■■■□ 3.32
ZNF558-203ENST00000595786 ZRANB1Q9UGI0 708 aa35.77■■■■□ 3.32
ZNF558-203ENST00000595786 USP31Q70CQ4 1352 aa35.76■■■■□ 3.32
ZNF558-203ENST00000595786 NINLQ9Y2I6 1382 aa35.76■■■■□ 3.31
ZNF558-203ENST00000595786 ZBTB7CA1YPR0 619 aa35.74■■■■□ 3.31
ZNF558-203ENST00000595786 CRB1P82279 1406 aa35.74■■■■□ 3.31
ZNF558-203ENST00000595786 COL18A1P39060 1754 aa35.73■■■■□ 3.31
ZNF558-203ENST00000595786 DEFB132Q7Z7B7 95 aa35.72■■■■□ 3.31
ZNF558-203ENST00000595786 PCGF6Q9BYE7 350 aa35.72■■■■□ 3.31
ZNF558-203ENST00000595786 EDC4Q6P2E9 1401 aaKnown RBP35.72■■■■□ 3.31
ZNF558-203ENST00000595786 FAM196AQ6ZSG2 479 aa35.71■■■■□ 3.31
ZNF558-203ENST00000595786 SUGP2Q8IX01 1082 aaKnown RBP eCLIP35.71■■■■□ 3.31
ZNF558-203ENST00000595786 BAG6P46379 1132 aa35.7■■■■□ 3.31
ZNF558-203ENST00000595786 PDE3BQ13370 1112 aa35.69■■■■□ 3.3
ZNF558-203ENST00000595786 FAM182BQ5T319 152 aa35.68■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms