RNA–Protein interactions for RNA: ENST00000595700.5

SMG9-203, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 1,401 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-203ENST00000595700 PHRF1Q9P1Y6 1649 aaKnown RBP21.13■□□□□ 0.97
SMG9-203ENST00000595700 CABP2Q9NPB3 220 aa21.12■□□□□ 0.97
SMG9-203ENST00000595700 CCDC61Q9Y6R9 512 aa21.12■□□□□ 0.97
SMG9-203ENST00000595700 POLR3AO14802 1390 aaPredicted RBP21.12■□□□□ 0.97
SMG9-203ENST00000595700 ACEP12821 1306 aa21.12■□□□□ 0.97
SMG9-203ENST00000595700 PPIP5K1Q6PFW1 1433 aa21.12■□□□□ 0.97
SMG9-203ENST00000595700 NRAPQ86VF7 1730 aa21.11■□□□□ 0.97
SMG9-203ENST00000595700 GLI3P10071 1580 aa21.11■□□□□ 0.97
SMG9-203ENST00000595700 COL14A1Q05707 1796 aaKnown RBP21.1■□□□□ 0.97
SMG9-203ENST00000595700 RALGAPBQ86X10 1494 aa21.1■□□□□ 0.97
SMG9-203ENST00000595700 UNC5CLQ8IV45 518 aa21.1■□□□□ 0.97
SMG9-203ENST00000595700 PLEKHG3A1L390 1219 aa21.09■□□□□ 0.97
SMG9-203ENST00000595700 UPF1Q92900 1129 aaKnown RBP eCLIP21.07■□□□□ 0.96
SMG9-203ENST00000595700 GJD4Q96KN9 370 aaPredicted RBP21.06■□□□□ 0.96
SMG9-203ENST00000595700 EVC2Q86UK5 1308 aa21.06■□□□□ 0.96
SMG9-203ENST00000595700 FAM83GA6ND36 823 aa21.04■□□□□ 0.96
SMG9-203ENST00000595700 NUTM2GQ5VZR2 741 aa21.04■□□□□ 0.96
SMG9-203ENST00000595700 CARD11Q9BXL7 1154 aa21.04■□□□□ 0.96
SMG9-203ENST00000595700 NRKQ7Z2Y5 1582 aa21.04■□□□□ 0.96
SMG9-203ENST00000595700 AKAP12Q02952 1782 aa21.04■□□□□ 0.96
SMG9-203ENST00000595700 BRWD3Q6RI45 1802 aa21.03■□□□□ 0.96
SMG9-203ENST00000595700 CABP1Q9NZU7 370 aa21.02■□□□□ 0.96
SMG9-203ENST00000595700 VPS72Q15906 364 aa21■□□□□ 0.95
SMG9-203ENST00000595700 BTG4Q9NY30 223 aa21■□□□□ 0.95
SMG9-203ENST00000595700 CCDC9Q9Y3X0 531 aaKnown RBP21■□□□□ 0.95
SMG9-203ENST00000595700 ATAD2Q6PL18 1390 aa21■□□□□ 0.95
SMG9-203ENST00000595700 USP6P35125 1406 aa21■□□□□ 0.95
SMG9-203ENST00000595700 ABTB2Q8N961 1025 aa20.99■□□□□ 0.95
SMG9-203ENST00000595700 PIK3C2AO00443 1686 aa20.98■□□□□ 0.95
SMG9-203ENST00000595700 KIAA0232Q92628 1395 aa20.98■□□□□ 0.95
SMG9-203ENST00000595700 SBNO2Q9Y2G9 1366 aa20.98■□□□□ 0.95
SMG9-203ENST00000595700 PRDM11Q9NQV5 511 aa20.98■□□□□ 0.95
SMG9-203ENST00000595700 BRD4O60885 1362 aaPredicted RBP20.96■□□□□ 0.95
SMG9-203ENST00000595700 ZC3H6P61129 1189 aaKnown RBP20.95■□□□□ 0.95
SMG9-203ENST00000595700 MON2Q7Z3U7 1717 aa20.95■□□□□ 0.94
SMG9-203ENST00000595700 USP19O94966 1318 aa20.95■□□□□ 0.94
SMG9-203ENST00000595700 CHRNA2Q15822 529 aa20.95■□□□□ 0.94
SMG9-203ENST00000595700 PCGF6Q9BYE7 350 aa20.94■□□□□ 0.94
SMG9-203ENST00000595700 EP400Q96L91 3159 aa20.94■□□□□ 0.94
SMG9-203ENST00000595700 LMO7Q8WWI1 1683 aa20.93■□□□□ 0.94
SMG9-203ENST00000595700 SSH2Q76I76 1423 aa20.93■□□□□ 0.94
SMG9-203ENST00000595700 NLRP13Q86W25 1043 aa20.92■□□□□ 0.94
SMG9-203ENST00000595700 SLIT3O75094 1523 aa20.92■□□□□ 0.94
SMG9-203ENST00000595700 SEPT12Q8IYM1 358 aa20.91■□□□□ 0.94
SMG9-203ENST00000595700 CPSF1Q10570 1443 aaKnown RBP20.89■□□□□ 0.94
SMG9-203ENST00000595700 THSD7AQ9UPZ6 1657 aa20.89■□□□□ 0.93
SMG9-203ENST00000595700 A0A0G2JS52 829 aa20.88■□□□□ 0.93
SMG9-203ENST00000595700 NLRP6P59044 892 aa20.88■□□□□ 0.93
SMG9-203ENST00000595700 MYT1Q01538 1121 aa20.88■□□□□ 0.93
SMG9-203ENST00000595700 FAM98CQ17RN3 349 aaKnown RBP20.88■□□□□ 0.93
SMG9-203ENST00000595700 STRN4Q9NRL3 753 aa20.88■□□□□ 0.93
SMG9-203ENST00000595700 CPDO75976 1380 aa20.88■□□□□ 0.93
SMG9-203ENST00000595700 KTN1Q86UP2 1357 aaKnown RBP20.88■□□□□ 0.93
SMG9-203ENST00000595700 CAMTA1Q9Y6Y1 1673 aa20.88■□□□□ 0.93
SMG9-203ENST00000595700 SPATA31A5Q5VU36 1347 aa20.88■□□□□ 0.93
SMG9-203ENST00000595700 SPATA31A7Q8IWB4 1347 aa20.88■□□□□ 0.93
SMG9-203ENST00000595700 GCP02774 474 aa20.87■□□□□ 0.93
SMG9-203ENST00000595700 ZNF692Q9BU19 519 aaPredicted RBP20.87■□□□□ 0.93
SMG9-203ENST00000595700 TTC21BQ7Z4L5 1316 aa20.87■□□□□ 0.93
SMG9-203ENST00000595700 CD163L1Q9NR16 1453 aa20.87■□□□□ 0.93
SMG9-203ENST00000595700 ONECUT3O60422 494 aaPredicted RBP20.87■□□□□ 0.93
SMG9-203ENST00000595700 ZBTB7CA1YPR0 619 aa20.86■□□□□ 0.93
SMG9-203ENST00000595700 ST20-MTHFSA0A0A6YYL1 179 aa20.85■□□□□ 0.93
SMG9-203ENST00000595700 TMC1Q8TDI8 760 aa20.85■□□□□ 0.93
SMG9-203ENST00000595700 USP54Q70EL1 1684 aa20.84■□□□□ 0.93
SMG9-203ENST00000595700 TESK2Q96S53 571 aa20.84■□□□□ 0.93
SMG9-203ENST00000595700 SPATA31A1Q5TZJ5 1347 aa20.84■□□□□ 0.93
SMG9-203ENST00000595700 TTC21AQ8NDW8 1320 aa20.84■□□□□ 0.93
SMG9-203ENST00000595700 CLSPNQ9HAW4 1339 aa20.84■□□□□ 0.93
SMG9-203ENST00000595700 COL18A1P39060 1754 aa20.83■□□□□ 0.93
SMG9-203ENST00000595700 KRT27Q7Z3Y8 459 aa20.83■□□□□ 0.93
SMG9-203ENST00000595700 USP47Q96K76 1375 aa20.82■□□□□ 0.92
SMG9-203ENST00000595700 RGPD5Q99666 1765 aa20.82■□□□□ 0.92
SMG9-203ENST00000595700 COL5A2P05997 1499 aaPredicted RBP20.81■□□□□ 0.92
SMG9-203ENST00000595700 EVA1CP58658 441 aa20.81■□□□□ 0.92
SMG9-203ENST00000595700 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.8■□□□□ 0.92
SMG9-203ENST00000595700 SLC12A5Q9H2X9 1139 aa20.8■□□□□ 0.92
SMG9-203ENST00000595700 NFAT5O94916 1531 aa20.8■□□□□ 0.92
SMG9-203ENST00000595700 SOX12O15370 315 aa20.79■□□□□ 0.92
SMG9-203ENST00000595700 LARP1Q6PKG0 1096 aaKnown RBP20.79■□□□□ 0.92
SMG9-203ENST00000595700 USP35Q9P2H5 1018 aa20.79■□□□□ 0.92
SMG9-203ENST00000595700 A0A1W2PP64 1363 aa20.79■□□□□ 0.92
SMG9-203ENST00000595700 BLMP54132 1417 aaPredicted RBP20.79■□□□□ 0.92
SMG9-203ENST00000595700 HDGFL2Q7Z4V5 671 aaPredicted RBP20.78■□□□□ 0.92
SMG9-203ENST00000595700 PUS7Q96PZ0 661 aaKnown RBP20.78■□□□□ 0.92
SMG9-203ENST00000595700 ZRANB1Q9UGI0 708 aa20.78■□□□□ 0.92
SMG9-203ENST00000595700 TIMELESSQ9UNS1 1208 aa20.78■□□□□ 0.92
SMG9-203ENST00000595700 AATKQ6ZMQ8 1374 aa20.77■□□□□ 0.92
SMG9-203ENST00000595700 EDC4Q6P2E9 1401 aaKnown RBP20.77■□□□□ 0.92
SMG9-203ENST00000595700 LTN1O94822 1766 aa20.77■□□□□ 0.92
SMG9-203ENST00000595700 CCDC125Q86Z20 511 aa20.77■□□□□ 0.91
SMG9-203ENST00000595700 WNK3Q9BYP7 1800 aa20.77■□□□□ 0.91
SMG9-203ENST00000595700 RGPD1P0DJD0 1748 aa20.76■□□□□ 0.91
SMG9-203ENST00000595700 FAM182BQ5T319 152 aa20.76■□□□□ 0.91
SMG9-203ENST00000595700 NME9Q86XW9 330 aa20.76■□□□□ 0.91
SMG9-203ENST00000595700 KCNH5Q8NCM2 988 aa20.75■□□□□ 0.91
SMG9-203ENST00000595700 CCER1Q8TC90 406 aaPredicted RBP20.75■□□□□ 0.91
SMG9-203ENST00000595700 TERF2IPQ9NYB0 399 aa20.75■□□□□ 0.91
SMG9-203ENST00000595700 PARP4Q9UKK3 1724 aaKnown RBP20.75■□□□□ 0.91
SMG9-203ENST00000595700 CRB1P82279 1406 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms