RNA–Protein interactions for RNA: ENST00000594213.5

GTF2F1-203, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 1,002 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-203ENST00000594213 FAM98CQ17RN3 349 aaKnown RBP23.21■■□□□ 1.31
GTF2F1-203ENST00000594213 CDK19Q9BWU1 502 aa23.21■■□□□ 1.31
GTF2F1-203ENST00000594213 BRWD3Q6RI45 1802 aa23.21■■□□□ 1.31
GTF2F1-203ENST00000594213 SPATA31A5Q5VU36 1347 aa23.2■■□□□ 1.3
GTF2F1-203ENST00000594213 SPATA31A7Q8IWB4 1347 aa23.2■■□□□ 1.3
GTF2F1-203ENST00000594213 PAK3O75914 559 aaPredicted RBP23.2■■□□□ 1.3
GTF2F1-203ENST00000594213 SF3B2Q13435 895 aaKnown RBP23.18■■□□□ 1.3
GTF2F1-203ENST00000594213 POLR3AO14802 1390 aaPredicted RBP23.17■■□□□ 1.3
GTF2F1-203ENST00000594213 NRAPQ86VF7 1730 aa23.17■■□□□ 1.3
GTF2F1-203ENST00000594213 PLEKHG3A1L390 1219 aa23.17■■□□□ 1.3
GTF2F1-203ENST00000594213 PRDM11Q9NQV5 511 aa23.17■■□□□ 1.3
GTF2F1-203ENST00000594213 NBPF1Q3BBV0 1214 aa23.16■■□□□ 1.3
GTF2F1-203ENST00000594213 NBPF8Q3BBV2 869 aa23.16■■□□□ 1.3
GTF2F1-203ENST00000594213 CCDC61Q9Y6R9 512 aa23.16■■□□□ 1.3
GTF2F1-203ENST00000594213 COL14A1Q05707 1796 aaKnown RBP23.16■■□□□ 1.3
GTF2F1-203ENST00000594213 ARHGEF28Q8N1W1 1705 aaKnown RBP23.16■■□□□ 1.3
GTF2F1-203ENST00000594213 ACEP12821 1306 aa23.14■■□□□ 1.3
GTF2F1-203ENST00000594213 KIAA0232Q92628 1395 aa23.14■■□□□ 1.29
GTF2F1-203ENST00000594213 A0A0G2JS52 829 aa23.13■■□□□ 1.29
GTF2F1-203ENST00000594213 MYT1Q01538 1121 aa23.13■■□□□ 1.29
GTF2F1-203ENST00000594213 CRYBG1Q9Y4K1 1723 aa23.13■■□□□ 1.29
GTF2F1-203ENST00000594213 SPATA31A1Q5TZJ5 1347 aa23.11■■□□□ 1.29
GTF2F1-203ENST00000594213 CHRNA2Q15822 529 aa23.11■■□□□ 1.29
GTF2F1-203ENST00000594213 NUTM2GQ5VZR2 741 aa23.1■■□□□ 1.29
GTF2F1-203ENST00000594213 BAG6P46379 1132 aa23.09■■□□□ 1.29
GTF2F1-203ENST00000594213 ZC3H6P61129 1189 aaKnown RBP23.09■■□□□ 1.29
GTF2F1-203ENST00000594213 FAM182BQ5T319 152 aa23.09■■□□□ 1.29
GTF2F1-203ENST00000594213 KIAA1210Q9ULL0 1709 aa23.07■■□□□ 1.28
GTF2F1-203ENST00000594213 THSD7AQ9UPZ6 1657 aa23.06■■□□□ 1.28
GTF2F1-203ENST00000594213 USP19O94966 1318 aa23.06■■□□□ 1.28
GTF2F1-203ENST00000594213 ITSN1Q15811 1721 aa23.05■■□□□ 1.28
GTF2F1-203ENST00000594213 CENPJQ9HC77 1338 aaPredicted RBP23.05■■□□□ 1.28
GTF2F1-203ENST00000594213 EN1Q05925 392 aaPredicted RBP23.04■■□□□ 1.28
GTF2F1-203ENST00000594213 ABTB2Q8N961 1025 aa23.04■■□□□ 1.28
GTF2F1-203ENST00000594213 STRN4Q9NRL3 753 aa23.04■■□□□ 1.28
GTF2F1-203ENST00000594213 TOPAZ1Q8N9V7 1692 aa23.03■■□□□ 1.28
GTF2F1-203ENST00000594213 CPDO75976 1380 aa23.03■■□□□ 1.28
GTF2F1-203ENST00000594213 DISP2A7MBM2 1401 aa23.03■■□□□ 1.28
GTF2F1-203ENST00000594213 BARGINQ6ZT62 677 aa23.02■■□□□ 1.28
GTF2F1-203ENST00000594213 CABP2Q9NPB3 220 aa23.02■■□□□ 1.28
GTF2F1-203ENST00000594213 SRPK2P78362 688 aaKnown RBP23.01■■□□□ 1.27
GTF2F1-203ENST00000594213 PHRF1Q9P1Y6 1649 aaKnown RBP23■■□□□ 1.27
GTF2F1-203ENST00000594213 SSH2Q76I76 1423 aa23■■□□□ 1.27
GTF2F1-203ENST00000594213 GCP02774 474 aa23■■□□□ 1.27
GTF2F1-203ENST00000594213 L3MBTL2Q969R5 705 aa23■■□□□ 1.27
GTF2F1-203ENST00000594213 PPIP5K1Q6PFW1 1433 aa22.99■■□□□ 1.27
GTF2F1-203ENST00000594213 PSDA5PKW4 1024 aaPredicted RBP22.99■■□□□ 1.27
GTF2F1-203ENST00000594213 LARP1Q6PKG0 1096 aaKnown RBP22.99■■□□□ 1.27
GTF2F1-203ENST00000594213 FAM196AQ6ZSG2 479 aa22.99■■□□□ 1.27
GTF2F1-203ENST00000594213 NLRP13Q86W25 1043 aa22.99■■□□□ 1.27
GTF2F1-203ENST00000594213 CAMTA1Q9Y6Y1 1673 aa22.99■■□□□ 1.27
GTF2F1-203ENST00000594213 BRD4O60885 1362 aaPredicted RBP22.99■■□□□ 1.27
GTF2F1-203ENST00000594213 EVA1CP58658 441 aa22.98■■□□□ 1.27
GTF2F1-203ENST00000594213 CAMKK2Q96RR4 588 aa22.97■■□□□ 1.27
GTF2F1-203ENST00000594213 CABP1Q9NZU7 370 aa22.97■■□□□ 1.27
GTF2F1-203ENST00000594213 TCP11L2Q8N4U5 519 aa22.96■■□□□ 1.27
GTF2F1-203ENST00000594213 USP35Q9P2H5 1018 aa22.96■■□□□ 1.27
GTF2F1-203ENST00000594213 NRKQ7Z2Y5 1582 aa22.96■■□□□ 1.27
GTF2F1-203ENST00000594213 TRIM37O94972 964 aa22.95■■□□□ 1.26
GTF2F1-203ENST00000594213 EZH2Q15910 746 aaKnown RBP22.95■■□□□ 1.26
GTF2F1-203ENST00000594213 THRAP3Q9Y2W1 955 aaKnown RBP22.93■■□□□ 1.26
GTF2F1-203ENST00000594213 LMO7Q8WWI1 1683 aa22.93■■□□□ 1.26
GTF2F1-203ENST00000594213 USP6P35125 1406 aa22.92■■□□□ 1.26
GTF2F1-203ENST00000594213 SIN3AQ96ST3 1273 aa22.92■■□□□ 1.26
GTF2F1-203ENST00000594213 RGPD1P0DJD0 1748 aa22.91■■□□□ 1.26
GTF2F1-203ENST00000594213 LRP5O75197 1615 aa22.91■■□□□ 1.26
GTF2F1-203ENST00000594213 PDE3BQ13370 1112 aa22.91■■□□□ 1.26
GTF2F1-203ENST00000594213 R3HDM1Q15032 1099 aaKnown RBP22.91■■□□□ 1.26
GTF2F1-203ENST00000594213 NLRP6P59044 892 aa22.9■■□□□ 1.26
GTF2F1-203ENST00000594213 AATKQ6ZMQ8 1374 aa22.89■■□□□ 1.26
GTF2F1-203ENST00000594213 APBA3O96018 575 aa22.89■■□□□ 1.25
GTF2F1-203ENST00000594213 TNS1Q9HBL0 1735 aaKnown RBP22.88■■□□□ 1.25
GTF2F1-203ENST00000594213 EVC2Q86UK5 1308 aa22.88■■□□□ 1.25
GTF2F1-203ENST00000594213 COL5A2P05997 1499 aaPredicted RBP22.88■■□□□ 1.25
GTF2F1-203ENST00000594213 PARD3Q8TEW0 1356 aa22.88■■□□□ 1.25
GTF2F1-203ENST00000594213 SLIT3O75094 1523 aa22.86■■□□□ 1.25
GTF2F1-203ENST00000594213 CRB1P82279 1406 aa22.84■■□□□ 1.25
GTF2F1-203ENST00000594213 ZNF692Q9BU19 519 aaPredicted RBP22.84■■□□□ 1.25
GTF2F1-203ENST00000594213 QRICH2Q9H0J4 1663 aa22.84■■□□□ 1.25
GTF2F1-203ENST00000594213 TTC21BQ7Z4L5 1316 aa22.83■■□□□ 1.25
GTF2F1-203ENST00000594213 AXIN2Q9Y2T1 843 aa22.83■■□□□ 1.25
GTF2F1-203ENST00000594213 ROCK2O75116 1388 aaKnown RBP22.82■■□□□ 1.24
GTF2F1-203ENST00000594213 NEUROD1Q13562 356 aa22.82■■□□□ 1.24
GTF2F1-203ENST00000594213 ARHGEF25Q86VW2 580 aa22.82■■□□□ 1.24
GTF2F1-203ENST00000594213 C11orf95C9JLR9 678 aaPredicted RBP22.8■■□□□ 1.24
GTF2F1-203ENST00000594213 TRPM1Q7Z4N2 1603 aa22.79■■□□□ 1.24
GTF2F1-203ENST00000594213 ZBTB7CA1YPR0 619 aa22.79■■□□□ 1.24
GTF2F1-203ENST00000594213 CPSF1Q10570 1443 aaKnown RBP22.79■■□□□ 1.24
GTF2F1-203ENST00000594213 WDR17Q8IZU2 1322 aa22.78■■□□□ 1.24
GTF2F1-203ENST00000594213 TTC21AQ8NDW8 1320 aa22.78■■□□□ 1.24
GTF2F1-203ENST00000594213 TOM1L2Q6ZVM7 507 aa22.77■■□□□ 1.24
GTF2F1-203ENST00000594213 KCNH5Q8NCM2 988 aa22.77■■□□□ 1.24
GTF2F1-203ENST00000594213 PIK3C2AO00443 1686 aa22.77■■□□□ 1.24
GTF2F1-203ENST00000594213 COL18A1P39060 1754 aa22.76■■□□□ 1.23
GTF2F1-203ENST00000594213 PARP4Q9UKK3 1724 aaKnown RBP22.76■■□□□ 1.23
GTF2F1-203ENST00000594213 DDB1Q16531 1140 aa22.75■■□□□ 1.23
GTF2F1-203ENST00000594213 OVOS2A0A0G2JMS6 1433 aa22.74■■□□□ 1.23
GTF2F1-203ENST00000594213 OVOS2A0A0J9YW53 1432 aa22.74■■□□□ 1.23
GTF2F1-203ENST00000594213 OVOS2Q6IE36 1432 aa22.74■■□□□ 1.23
GTF2F1-203ENST00000594213 NBPF14Q5TI25 921 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms