RNA–Protein interactions for RNA: ENST00000593891.1

ZNF558-202, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 292 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-202ENST00000593891 PLSCR1O15162 318 aa18.47■□□□□ 0.55
ZNF558-202ENST00000593891 PELP1Q8IZL8 1130 aaKnown RBP18.47■□□□□ 0.55
ZNF558-202ENST00000593891 GPBP1L1Q9HC44 474 aaPredicted RBP18.47■□□□□ 0.55
ZNF558-202ENST00000593891 MAP3K5Q99683 1374 aa18.46■□□□□ 0.55
ZNF558-202ENST00000593891 C11orf95C9JLR9 678 aaPredicted RBP18.46■□□□□ 0.55
ZNF558-202ENST00000593891 KANK4Q5T7N3 995 aaPredicted RBP18.46■□□□□ 0.55
ZNF558-202ENST00000593891 PHF8Q9UPP1 1060 aa18.46■□□□□ 0.55
ZNF558-202ENST00000593891 CASZ1Q86V15 1759 aa18.45■□□□□ 0.54
ZNF558-202ENST00000593891 VGFO15240 615 aaPredicted RBP18.45■□□□□ 0.54
ZNF558-202ENST00000593891 SHANK3Q9BYB0 1731 aa18.44■□□□□ 0.54
ZNF558-202ENST00000593891 SGIP1Q9BQI5 828 aa18.44■□□□□ 0.54
ZNF558-202ENST00000593891 STK32BQ9NY57 414 aa18.44■□□□□ 0.54
ZNF558-202ENST00000593891 E9PCH4 1651 aa18.44■□□□□ 0.54
ZNF558-202ENST00000593891 APLP1P51693 650 aa18.43■□□□□ 0.54
ZNF558-202ENST00000593891 KIF1AQ12756 1690 aa18.42■□□□□ 0.54
ZNF558-202ENST00000593891 PRDM11Q9NQV5 511 aa18.42■□□□□ 0.54
ZNF558-202ENST00000593891 COL14A1Q05707 1796 aaKnown RBP18.42■□□□□ 0.54
ZNF558-202ENST00000593891 BARGINQ6ZT62 677 aa18.41■□□□□ 0.54
ZNF558-202ENST00000593891 USP35Q9P2H5 1018 aa18.41■□□□□ 0.54
ZNF558-202ENST00000593891 STRN4Q9NRL3 753 aa18.4■□□□□ 0.54
ZNF558-202ENST00000593891 ATP10DQ9P241 1426 aa18.4■□□□□ 0.54
ZNF558-202ENST00000593891 GRIN3BO60391 1043 aa18.39■□□□□ 0.53
ZNF558-202ENST00000593891 WAPLQ7Z5K2 1190 aa18.39■□□□□ 0.53
ZNF558-202ENST00000593891 SLC15A2Q16348 729 aa18.38■□□□□ 0.53
ZNF558-202ENST00000593891 DNAJC5GQ8N7S2 189 aa18.37■□□□□ 0.53
ZNF558-202ENST00000593891 ABCA3Q99758 1704 aa18.37■□□□□ 0.53
ZNF558-202ENST00000593891 KLHL34Q8N239 644 aa18.36■□□□□ 0.53
ZNF558-202ENST00000593891 EVA1CP58658 441 aa18.34■□□□□ 0.53
ZNF558-202ENST00000593891 PROM2Q8N271 834 aa18.34■□□□□ 0.53
ZNF558-202ENST00000593891 STK26Q9P289 416 aa18.34■□□□□ 0.53
ZNF558-202ENST00000593891 TECPR2O15040 1411 aa18.33■□□□□ 0.53
ZNF558-202ENST00000593891 NUP155O75694 1391 aa18.33■□□□□ 0.53
ZNF558-202ENST00000593891 ZNF526Q8TF50 670 aaPredicted RBP18.32■□□□□ 0.52
ZNF558-202ENST00000593891 TCP11L2Q8N4U5 519 aa18.31■□□□□ 0.52
ZNF558-202ENST00000593891 NRXN1Q9ULB1 1477 aa18.31■□□□□ 0.52
ZNF558-202ENST00000593891 CHRNA2Q15822 529 aa18.29■□□□□ 0.52
ZNF558-202ENST00000593891 TXNRD1Q16881 649 aa18.28■□□□□ 0.52
ZNF558-202ENST00000593891 PMFBP1Q8TBY8 1022 aa18.28■□□□□ 0.52
ZNF558-202ENST00000593891 RGPD3A6NKT7 1758 aaPredicted RBP18.27■□□□□ 0.52
ZNF558-202ENST00000593891 RGPD4Q7Z3J3 1758 aa18.27■□□□□ 0.52
ZNF558-202ENST00000593891 OVOS2A0A0G2JMS6 1433 aa18.27■□□□□ 0.52
ZNF558-202ENST00000593891 OVOS2A0A0J9YW53 1432 aa18.27■□□□□ 0.52
ZNF558-202ENST00000593891 OVOS2Q6IE36 1432 aa18.27■□□□□ 0.52
ZNF558-202ENST00000593891 THRAP3Q9Y2W1 955 aaKnown RBP18.27■□□□□ 0.52
ZNF558-202ENST00000593891 FMN2Q9NZ56 1722 aa18.26■□□□□ 0.51
ZNF558-202ENST00000593891 RPGRIP1LQ68CZ1 1315 aa18.26■□□□□ 0.51
ZNF558-202ENST00000593891 POLD1P28340 1107 aa18.26■□□□□ 0.51
ZNF558-202ENST00000593891 AATKQ6ZMQ8 1374 aa18.26■□□□□ 0.51
ZNF558-202ENST00000593891 KIAA0232Q92628 1395 aa18.26■□□□□ 0.51
ZNF558-202ENST00000593891 WWC3Q9ULE0 1092 aa18.25■□□□□ 0.51
ZNF558-202ENST00000593891 GPRASP1Q5JY77 1395 aa18.25■□□□□ 0.51
ZNF558-202ENST00000593891 PLEKHH1Q9ULM0 1364 aa18.25■□□□□ 0.51
ZNF558-202ENST00000593891 YBX3P16989 372 aaKnown RBP eCLIP18.24■□□□□ 0.51
ZNF558-202ENST00000593891 DHX57Q6P158 1386 aaKnown RBP18.24■□□□□ 0.51
ZNF558-202ENST00000593891 PTF1AQ7RTS3 328 aa18.23■□□□□ 0.51
ZNF558-202ENST00000593891 JMYQ8N9B5 988 aa18.23■□□□□ 0.51
ZNF558-202ENST00000593891 SSH2Q76I76 1423 aa18.23■□□□□ 0.51
ZNF558-202ENST00000593891 ABCC11Q96J66 1382 aa18.22■□□□□ 0.51
ZNF558-202ENST00000593891 FAM50AQ14320 339 aaKnown RBP18.22■□□□□ 0.51
ZNF558-202ENST00000593891 LARP1Q6PKG0 1096 aaKnown RBP18.22■□□□□ 0.51
ZNF558-202ENST00000593891 NLGN2Q8NFZ4 835 aa18.22■□□□□ 0.51
ZNF558-202ENST00000593891 KLRG1Q96E93 195 aa18.21■□□□□ 0.51
ZNF558-202ENST00000593891 KIF3CO14782 793 aa18.2■□□□□ 0.5
ZNF558-202ENST00000593891 PAK3O75914 559 aaPredicted RBP18.2■□□□□ 0.5
ZNF558-202ENST00000593891 ZC3H6P61129 1189 aaKnown RBP18.2■□□□□ 0.5
ZNF558-202ENST00000593891 VPS8Q8N3P4 1428 aa18.2■□□□□ 0.5
ZNF558-202ENST00000593891 GOLGB1Q14789 3259 aaKnown RBP18.18■□□□□ 0.5
ZNF558-202ENST00000593891 SLC16A10Q8TF71 515 aa18.18■□□□□ 0.5
ZNF558-202ENST00000593891 ADCY9O60503 1353 aa18.17■□□□□ 0.5
ZNF558-202ENST00000593891 DDB1Q16531 1140 aa18.17■□□□□ 0.5
ZNF558-202ENST00000593891 TOMM70O94826 608 aa18.16■□□□□ 0.5
ZNF558-202ENST00000593891 SIRT1Q96EB6 747 aa18.16■□□□□ 0.5
ZNF558-202ENST00000593891 ACIN1Q9UKV3 1341 aaKnown RBP18.15■□□□□ 0.5
ZNF558-202ENST00000593891 CLTCL1P53675 1640 aa18.15■□□□□ 0.5
ZNF558-202ENST00000593891 APLP2Q06481 763 aa18.14■□□□□ 0.49
ZNF558-202ENST00000593891 TMEM132EQ6IEE7 984 aa18.14■□□□□ 0.49
ZNF558-202ENST00000593891 ANKARQ7Z5J8 1434 aa18.12■□□□□ 0.49
ZNF558-202ENST00000593891 ATP7BP35670 1465 aa18.12■□□□□ 0.49
ZNF558-202ENST00000593891 ALS2Q96Q42 1657 aa18.11■□□□□ 0.49
ZNF558-202ENST00000593891 PEAK1Q9H792 1746 aa18.1■□□□□ 0.49
ZNF558-202ENST00000593891 TRPM3Q9HCF6 1732 aaPredicted RBP18.1■□□□□ 0.49
ZNF558-202ENST00000593891 NGDNQ8NEJ9 315 aaKnown RBP18.1■□□□□ 0.49
ZNF558-202ENST00000593891 RGPD8O14715 1765 aaPredicted RBP18.09■□□□□ 0.49
ZNF558-202ENST00000593891 BCL9O00512 1426 aa18.08■□□□□ 0.49
ZNF558-202ENST00000593891 KIF1BO60333 1816 aa18.08■□□□□ 0.48
ZNF558-202ENST00000593891 MARCH10Q8NA82 808 aaPredicted RBP18.08■□□□□ 0.48
ZNF558-202ENST00000593891 PARP4Q9UKK3 1724 aaKnown RBP18.08■□□□□ 0.48
ZNF558-202ENST00000593891 ADGRF5Q8IZF2 1346 aa18.07■□□□□ 0.48
ZNF558-202ENST00000593891 YTHDC2Q9H6S0 1430 aaKnown RBP18.06■□□□□ 0.48
ZNF558-202ENST00000593891 ROCK1Q13464 1354 aa18.06■□□□□ 0.48
ZNF558-202ENST00000593891 HTRA3P83110 453 aa18.06■□□□□ 0.48
ZNF558-202ENST00000593891 SAFB2Q14151 953 aaKnown RBP eCLIP18.06■□□□□ 0.48
ZNF558-202ENST00000593891 ZNF827Q17R98 1081 aa18.05■□□□□ 0.48
ZNF558-202ENST00000593891 ANKRD30BQ9BXX2 1392 aa18.04■□□□□ 0.48
ZNF558-202ENST00000593891 IFT172Q9UG01 1749 aa18.04■□□□□ 0.48
ZNF558-202ENST00000593891 CRYBG1Q9Y4K1 1723 aa18.03■□□□□ 0.48
ZNF558-202ENST00000593891 SBF2Q86WG5 1849 aa18.03■□□□□ 0.48
ZNF558-202ENST00000593891 NUTM2GQ5VZR2 741 aa18.03■□□□□ 0.48
ZNF558-202ENST00000593891 CRB1P82279 1406 aa18.03■□□□□ 0.48
ZNF558-202ENST00000593891 HSPA1AP0DMV8 641 aaKnown RBP18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms