RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 ONECUT3O60422 494 aaPredicted RBP32.98■■■□□ 2.87
SSBP4-203ENST00000593641 ATP7BP35670 1465 aa32.98■■■□□ 2.87
SSBP4-203ENST00000593641 KIAA1210Q9ULL0 1709 aa32.97■■■□□ 2.87
SSBP4-203ENST00000593641 CRYBG1Q9Y4K1 1723 aa32.97■■■□□ 2.87
SSBP4-203ENST00000593641 A0A0G2JS52 829 aa32.97■■■□□ 2.87
SSBP4-203ENST00000593641 MYT1Q01538 1121 aa32.97■■■□□ 2.87
SSBP4-203ENST00000593641 SF3B2Q13435 895 aaKnown RBP32.97■■■□□ 2.87
SSBP4-203ENST00000593641 BTG4Q9NY30 223 aa32.97■■■□□ 2.87
SSBP4-203ENST00000593641 KRT27Q7Z3Y8 459 aa32.95■■■□□ 2.87
SSBP4-203ENST00000593641 NUDT16Q96DE0 195 aaKnown RBP32.94■■■□□ 2.86
SSBP4-203ENST00000593641 FAM98CQ17RN3 349 aaKnown RBP32.9■■■□□ 2.86
SSBP4-203ENST00000593641 CDK19Q9BWU1 502 aa32.89■■■□□ 2.86
SSBP4-203ENST00000593641 PRDM11Q9NQV5 511 aa32.89■■■□□ 2.86
SSBP4-203ENST00000593641 TOPAZ1Q8N9V7 1692 aa32.88■■■□□ 2.85
SSBP4-203ENST00000593641 DEFB132Q7Z7B7 95 aa32.88■■■□□ 2.85
SSBP4-203ENST00000593641 PHRF1Q9P1Y6 1649 aaKnown RBP32.86■■■□□ 2.85
SSBP4-203ENST00000593641 SPATA31A5Q5VU36 1347 aa32.83■■■□□ 2.85
SSBP4-203ENST00000593641 SPATA31A7Q8IWB4 1347 aa32.83■■■□□ 2.85
SSBP4-203ENST00000593641 CCDC61Q9Y6R9 512 aa32.83■■■□□ 2.85
SSBP4-203ENST00000593641 POLR3AO14802 1390 aaPredicted RBP32.83■■■□□ 2.85
SSBP4-203ENST00000593641 KIAA0232Q92628 1395 aa32.81■■■□□ 2.84
SSBP4-203ENST00000593641 ACEP12821 1306 aa32.8■■■□□ 2.84
SSBP4-203ENST00000593641 NBPF1Q3BBV0 1214 aa32.79■■■□□ 2.84
SSBP4-203ENST00000593641 THSD7AQ9UPZ6 1657 aa32.78■■■□□ 2.84
SSBP4-203ENST00000593641 BAG6P46379 1132 aa32.77■■■□□ 2.84
SSBP4-203ENST00000593641 NBPF8Q3BBV2 869 aa32.77■■■□□ 2.84
SSBP4-203ENST00000593641 NUTM2GQ5VZR2 741 aa32.77■■■□□ 2.84
SSBP4-203ENST00000593641 RGPD1P0DJD0 1748 aa32.77■■■□□ 2.84
SSBP4-203ENST00000593641 PLEKHG3A1L390 1219 aa32.76■■■□□ 2.83
SSBP4-203ENST00000593641 CHRNA2Q15822 529 aa32.75■■■□□ 2.83
SSBP4-203ENST00000593641 ZC3H6P61129 1189 aaKnown RBP32.74■■■□□ 2.83
SSBP4-203ENST00000593641 CENPJQ9HC77 1338 aaPredicted RBP32.74■■■□□ 2.83
SSBP4-203ENST00000593641 SRPK2P78362 688 aaKnown RBP32.73■■■□□ 2.83
SSBP4-203ENST00000593641 STRN4Q9NRL3 753 aa32.73■■■□□ 2.83
SSBP4-203ENST00000593641 QRICH2Q9H0J4 1663 aa32.72■■■□□ 2.83
SSBP4-203ENST00000593641 NRKQ7Z2Y5 1582 aa32.71■■■□□ 2.83
SSBP4-203ENST00000593641 ABTB2Q8N961 1025 aa32.71■■■□□ 2.83
SSBP4-203ENST00000593641 SPATA31A1Q5TZJ5 1347 aa32.71■■■□□ 2.83
SSBP4-203ENST00000593641 PPIP5K1Q6PFW1 1433 aa32.7■■■□□ 2.83
SSBP4-203ENST00000593641 FAM182BQ5T319 152 aa32.68■■■□□ 2.82
SSBP4-203ENST00000593641 EVA1CP58658 441 aa32.66■■■□□ 2.82
SSBP4-203ENST00000593641 CABP2Q9NPB3 220 aa32.65■■■□□ 2.82
SSBP4-203ENST00000593641 SSH2Q76I76 1423 aa32.65■■■□□ 2.82
SSBP4-203ENST00000593641 TNS1Q9HBL0 1735 aaKnown RBP32.64■■■□□ 2.82
SSBP4-203ENST00000593641 USP19O94966 1318 aa32.63■■■□□ 2.81
SSBP4-203ENST00000593641 USP35Q9P2H5 1018 aa32.63■■■□□ 2.81
SSBP4-203ENST00000593641 CPDO75976 1380 aa32.62■■■□□ 2.81
SSBP4-203ENST00000593641 NLRP13Q86W25 1043 aa32.62■■■□□ 2.81
SSBP4-203ENST00000593641 EN1Q05925 392 aaPredicted RBP32.61■■■□□ 2.81
SSBP4-203ENST00000593641 LMO7Q8WWI1 1683 aa32.61■■■□□ 2.81
SSBP4-203ENST00000593641 LRP5O75197 1615 aa32.61■■■□□ 2.81
SSBP4-203ENST00000593641 BRD4O60885 1362 aaPredicted RBP32.6■■■□□ 2.81
SSBP4-203ENST00000593641 CAMTA1Q9Y6Y1 1673 aa32.6■■■□□ 2.81
SSBP4-203ENST00000593641 DISP2A7MBM2 1401 aa32.6■■■□□ 2.81
SSBP4-203ENST00000593641 L3MBTL2Q969R5 705 aa32.59■■■□□ 2.81
SSBP4-203ENST00000593641 FAM196AQ6ZSG2 479 aa32.58■■■□□ 2.81
SSBP4-203ENST00000593641 TRPM1Q7Z4N2 1603 aa32.58■■■□□ 2.81
SSBP4-203ENST00000593641 PSDA5PKW4 1024 aaPredicted RBP32.57■■■□□ 2.8
SSBP4-203ENST00000593641 BARGINQ6ZT62 677 aa32.57■■■□□ 2.8
SSBP4-203ENST00000593641 GCP02774 474 aa32.56■■■□□ 2.8
SSBP4-203ENST00000593641 USP6P35125 1406 aa32.55■■■□□ 2.8
SSBP4-203ENST00000593641 LARP1Q6PKG0 1096 aaKnown RBP32.55■■■□□ 2.8
SSBP4-203ENST00000593641 CABP1Q9NZU7 370 aa32.55■■■□□ 2.8
SSBP4-203ENST00000593641 PDE3BQ13370 1112 aa32.53■■■□□ 2.8
SSBP4-203ENST00000593641 TCP11L2Q8N4U5 519 aa32.53■■■□□ 2.8
SSBP4-203ENST00000593641 EVC2Q86UK5 1308 aa32.52■■■□□ 2.8
SSBP4-203ENST00000593641 TRIM37O94972 964 aa32.52■■■□□ 2.8
SSBP4-203ENST00000593641 COL5A2P05997 1499 aaPredicted RBP32.5■■■□□ 2.79
SSBP4-203ENST00000593641 NLRP6P59044 892 aa32.5■■■□□ 2.79
SSBP4-203ENST00000593641 SIN3AQ96ST3 1273 aa32.5■■■□□ 2.79
SSBP4-203ENST00000593641 THRAP3Q9Y2W1 955 aaKnown RBP32.5■■■□□ 2.79
SSBP4-203ENST00000593641 ROCK2O75116 1388 aaKnown RBP32.49■■■□□ 2.79
SSBP4-203ENST00000593641 EZH2Q15910 746 aaKnown RBP32.48■■■□□ 2.79
SSBP4-203ENST00000593641 SLIT3O75094 1523 aa32.47■■■□□ 2.79
SSBP4-203ENST00000593641 ZBTB7CA1YPR0 619 aa32.47■■■□□ 2.79
SSBP4-203ENST00000593641 PIK3C2AO00443 1686 aa32.46■■■□□ 2.79
SSBP4-203ENST00000593641 PARP4Q9UKK3 1724 aaKnown RBP32.46■■■□□ 2.79
SSBP4-203ENST00000593641 NEUROD1Q13562 356 aa32.46■■■□□ 2.79
SSBP4-203ENST00000593641 PARD3Q8TEW0 1356 aa32.45■■■□□ 2.79
SSBP4-203ENST00000593641 APBA3O96018 575 aa32.45■■■□□ 2.79
SSBP4-203ENST00000593641 R3HDM1Q15032 1099 aaKnown RBP32.44■■■□□ 2.78
SSBP4-203ENST00000593641 CRB1P82279 1406 aa32.43■■■□□ 2.78
SSBP4-203ENST00000593641 CAMKK2Q96RR4 588 aa32.43■■■□□ 2.78
SSBP4-203ENST00000593641 AKAP12Q02952 1782 aa32.42■■■□□ 2.78
SSBP4-203ENST00000593641 AATKQ6ZMQ8 1374 aa32.42■■■□□ 2.78
SSBP4-203ENST00000593641 ZNF692Q9BU19 519 aaPredicted RBP32.39■■■□□ 2.78
SSBP4-203ENST00000593641 RREB1Q92766 1687 aa32.38■■■□□ 2.77
SSBP4-203ENST00000593641 COL18A1P39060 1754 aa32.37■■■□□ 2.77
SSBP4-203ENST00000593641 C11orf95C9JLR9 678 aaPredicted RBP32.35■■■□□ 2.77
SSBP4-203ENST00000593641 TOM1L2Q6ZVM7 507 aa32.35■■■□□ 2.77
SSBP4-203ENST00000593641 NUP188Q5SRE5 1749 aa32.34■■■□□ 2.77
SSBP4-203ENST00000593641 TTC21BQ7Z4L5 1316 aa32.34■■■□□ 2.77
SSBP4-203ENST00000593641 KCNH5Q8NCM2 988 aa32.34■■■□□ 2.77
SSBP4-203ENST00000593641 CPSF1Q10570 1443 aaKnown RBP32.34■■■□□ 2.77
SSBP4-203ENST00000593641 LRRC37A3O60309 1634 aa32.33■■■□□ 2.77
SSBP4-203ENST00000593641 OVOS2A0A0G2JMS6 1433 aa32.33■■■□□ 2.77
SSBP4-203ENST00000593641 OVOS2A0A0J9YW53 1432 aa32.33■■■□□ 2.77
SSBP4-203ENST00000593641 OVOS2Q6IE36 1432 aa32.33■■■□□ 2.77
SSBP4-203ENST00000593641 WNK3Q9BYP7 1800 aa32.33■■■□□ 2.77
SSBP4-203ENST00000593641 TTC21AQ8NDW8 1320 aa32.32■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms