RNA–Protein interactions for RNA: ENST00000593174.5

CCDC130-212, Transcript of coiled-coil domain containing 130, humanhuman

TSL 5

Gene CCDC130, Length 1,783 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-212ENST00000593174 LRRC7Q96NW7 1537 aa22.74■■□□□ 1.23
CCDC130-212ENST00000593174 ATF3P18847 181 aa22.73■■□□□ 1.23
CCDC130-212ENST00000593174 PHF8Q9UPP1 1060 aa22.73■■□□□ 1.23
CCDC130-212ENST00000593174 ANKRD26Q9UPS8 1709 aa22.73■■□□□ 1.23
CCDC130-212ENST00000593174 USP6P35125 1406 aa22.73■■□□□ 1.23
CCDC130-212ENST00000593174 TNNT2P45379 298 aaPredicted RBP22.72■■□□□ 1.23
CCDC130-212ENST00000593174 ESCO1Q5FWF5 840 aa22.72■■□□□ 1.23
CCDC130-212ENST00000593174 DCCP43146 1447 aa22.71■■□□□ 1.23
CCDC130-212ENST00000593174 MSH6P52701 1360 aa22.71■■□□□ 1.23
CCDC130-212ENST00000593174 HNRNPUQ00839 825 aaKnown RBP eCLIP22.71■■□□□ 1.23
CCDC130-212ENST00000593174 TTC21BQ7Z4L5 1316 aa22.71■■□□□ 1.23
CCDC130-212ENST00000593174 FAM9BQ8IZU0 186 aa22.71■■□□□ 1.23
CCDC130-212ENST00000593174 NME9Q86XW9 330 aa22.7■■□□□ 1.22
CCDC130-212ENST00000593174 NRKQ7Z2Y5 1582 aa22.7■■□□□ 1.22
CCDC130-212ENST00000593174 TSHZ2Q9NRE2 1034 aa22.68■■□□□ 1.22
CCDC130-212ENST00000593174 CADPS2Q86UW7 1296 aa22.68■■□□□ 1.22
CCDC130-212ENST00000593174 ORAI2Q96SN7 254 aa22.68■■□□□ 1.22
CCDC130-212ENST00000593174 C1orf167Q5SNV9 1468 aa22.68■■□□□ 1.22
CCDC130-212ENST00000593174 PNISRQ8TF01 805 aaKnown RBP22.67■■□□□ 1.22
CCDC130-212ENST00000593174 SSH2Q76I76 1423 aa22.67■■□□□ 1.22
CCDC130-212ENST00000593174 MST1RQ04912 1400 aa22.66■■□□□ 1.22
CCDC130-212ENST00000593174 ERICH6BQ5W0A0 696 aa22.66■■□□□ 1.22
CCDC130-212ENST00000593174 ZRANB1Q9UGI0 708 aa22.66■■□□□ 1.22
CCDC130-212ENST00000593174 TTC21AQ8NDW8 1320 aa22.64■■□□□ 1.22
CCDC130-212ENST00000593174 COG3Q96JB2 828 aa22.64■■□□□ 1.22
CCDC130-212ENST00000593174 PSME1Q06323 249 aa22.62■■□□□ 1.21
CCDC130-212ENST00000593174 KIF1AQ12756 1690 aa22.61■■□□□ 1.21
CCDC130-212ENST00000593174 MTHFSP49914 203 aa22.61■■□□□ 1.21
CCDC130-212ENST00000593174 FOXO3O43524 673 aa22.6■■□□□ 1.21
CCDC130-212ENST00000593174 PAK3O75914 559 aaPredicted RBP22.59■■□□□ 1.21
CCDC130-212ENST00000593174 PIK3C2AO00443 1686 aa22.57■■□□□ 1.2
CCDC130-212ENST00000593174 OVOS2A0A0J9YW53 1432 aa22.57■■□□□ 1.2
CCDC130-212ENST00000593174 OVOS2Q6IE36 1432 aa22.57■■□□□ 1.2
CCDC130-212ENST00000593174 MAP2P11137 1827 aaKnown RBP22.56■■□□□ 1.2
CCDC130-212ENST00000593174 ZBED9Q6R2W3 1325 aa22.56■■□□□ 1.2
CCDC130-212ENST00000593174 LTBP4Q8N2S1 1624 aa22.56■■□□□ 1.2
CCDC130-212ENST00000593174 CFAP53Q96M91 514 aa22.55■■□□□ 1.2
CCDC130-212ENST00000593174 FBLN1P23142 703 aa22.55■■□□□ 1.2
CCDC130-212ENST00000593174 ABTB2Q8N961 1025 aa22.55■■□□□ 1.2
CCDC130-212ENST00000593174 USP31Q70CQ4 1352 aa22.55■■□□□ 1.2
CCDC130-212ENST00000593174 XPCQ01831 940 aaPredicted RBP22.54■■□□□ 1.2
CCDC130-212ENST00000593174 WDR43Q15061 677 aaKnown RBP eCLIP22.54■■□□□ 1.2
CCDC130-212ENST00000593174 KRT28Q7Z3Y7 464 aa22.54■■□□□ 1.2
CCDC130-212ENST00000593174 SLAIN2Q9P270 581 aa22.54■■□□□ 1.2
CCDC130-212ENST00000593174 NLRP6P59044 892 aa22.53■■□□□ 1.2
CCDC130-212ENST00000593174 AATKQ6ZMQ8 1374 aa22.53■■□□□ 1.2
CCDC130-212ENST00000593174 POLKQ9UBT6 870 aa22.53■■□□□ 1.2
CCDC130-212ENST00000593174 NUTM2GQ5VZR2 741 aa22.52■■□□□ 1.2
CCDC130-212ENST00000593174 ADAMTS8Q9UP79 889 aa22.5■■□□□ 1.19
CCDC130-212ENST00000593174 BRINP3Q76B58 766 aa22.5■■□□□ 1.19
CCDC130-212ENST00000593174 TRPM3Q9HCF6 1732 aaPredicted RBP22.5■■□□□ 1.19
CCDC130-212ENST00000593174 PPM1GO15355 546 aaPredicted RBP22.49■■□□□ 1.19
CCDC130-212ENST00000593174 DDX17Q92841 729 aaKnown RBP22.49■■□□□ 1.19
CCDC130-212ENST00000593174 USP54Q70EL1 1684 aa22.49■■□□□ 1.19
CCDC130-212ENST00000593174 NPHP3Q7Z494 1330 aa22.48■■□□□ 1.19
CCDC130-212ENST00000593174 RRS1Q15050 365 aaKnown RBP22.48■■□□□ 1.19
CCDC130-212ENST00000593174 EMILIN1Q9Y6C2 1016 aa22.48■■□□□ 1.19
CCDC130-212ENST00000593174 MARF1Q9Y4F3 1742 aaKnown RBP22.48■■□□□ 1.19
CCDC130-212ENST00000593174 SOX12O15370 315 aa22.48■■□□□ 1.19
CCDC130-212ENST00000593174 SHPRHQ149N8 1683 aa22.47■■□□□ 1.19
CCDC130-212ENST00000593174 INSRP06213 1382 aa22.46■■□□□ 1.19
CCDC130-212ENST00000593174 SMG6Q86US8 1419 aaKnown RBP22.46■■□□□ 1.19
CCDC130-212ENST00000593174 LMOD2Q6P5Q4 547 aa22.45■■□□□ 1.19
CCDC130-212ENST00000593174 PNPLA6Q8IY17 1366 aa22.45■■□□□ 1.18
CCDC130-212ENST00000593174 COL3A1P02461 1466 aaPredicted RBP22.45■■□□□ 1.18
CCDC130-212ENST00000593174 DIAPH1O60610 1272 aaKnown RBP22.43■■□□□ 1.18
CCDC130-212ENST00000593174 NUDCQ9Y266 331 aa22.43■■□□□ 1.18
CCDC130-212ENST00000593174 BLMP54132 1417 aaPredicted RBP22.42■■□□□ 1.18
CCDC130-212ENST00000593174 CDK12Q9NYV4 1490 aaPredicted RBP22.42■■□□□ 1.18
CCDC130-212ENST00000593174 SBNO1A3KN83 1393 aa22.42■■□□□ 1.18
CCDC130-212ENST00000593174 PXDNQ92626 1479 aa22.41■■□□□ 1.18
CCDC130-212ENST00000593174 ALS2Q96Q42 1657 aa22.41■■□□□ 1.18
CCDC130-212ENST00000593174 SENP3-EIF4A1A0A087X0R7 540 aa22.4■■□□□ 1.18
CCDC130-212ENST00000593174 PPP4R2Q9NY27 417 aa22.4■■□□□ 1.18
CCDC130-212ENST00000593174 MAP3K19Q56UN5 1328 aa22.4■■□□□ 1.18
CCDC130-212ENST00000593174 U2SURPO15042 1029 aaKnown RBP22.39■■□□□ 1.17
CCDC130-212ENST00000593174 U2AF1L5P0DN76 240 aaPredicted RBP22.38■■□□□ 1.17
CCDC130-212ENST00000593174 U2AF1Q01081 240 aaKnown RBP eCLIP22.38■■□□□ 1.17
CCDC130-212ENST00000593174 PEAK1Q9H792 1746 aa22.38■■□□□ 1.17
CCDC130-212ENST00000593174 PLEKHG5O94827 1062 aa22.38■■□□□ 1.17
CCDC130-212ENST00000593174 KCNH5Q8NCM2 988 aa22.38■■□□□ 1.17
CCDC130-212ENST00000593174 TNS3Q68CZ2 1445 aa22.37■■□□□ 1.17
CCDC130-212ENST00000593174 CCDC146Q8IYE0 955 aa22.37■■□□□ 1.17
CCDC130-212ENST00000593174 SPATA31A3Q5VYP0 1347 aa22.37■■□□□ 1.17
CCDC130-212ENST00000593174 AMPHP49418 695 aa22.36■■□□□ 1.17
CCDC130-212ENST00000593174 USP19O94966 1318 aa22.35■■□□□ 1.17
CCDC130-212ENST00000593174 SOS2Q07890 1332 aaPredicted RBP22.35■■□□□ 1.17
CCDC130-212ENST00000593174 SLIT3O75094 1523 aa22.35■■□□□ 1.17
CCDC130-212ENST00000593174 NFAT5O94916 1531 aa22.35■■□□□ 1.17
CCDC130-212ENST00000593174 IL13P35225 146 aa22.35■■□□□ 1.17
CCDC130-212ENST00000593174 NHSL1Q5SYE7 1610 aa22.35■■□□□ 1.17
CCDC130-212ENST00000593174 GCP02774 474 aa22.34■■□□□ 1.17
CCDC130-212ENST00000593174 FLT4P35916 1363 aa22.33■■□□□ 1.17
CCDC130-212ENST00000593174 HSP90AB2PQ58FF8 381 aa22.33■■□□□ 1.17
CCDC130-212ENST00000593174 LTN1O94822 1766 aa22.33■■□□□ 1.17
CCDC130-212ENST00000593174 ARHGEF10O15013 1369 aa22.33■■□□□ 1.16
CCDC130-212ENST00000593174 SALL2Q9Y467 1007 aaPredicted RBP22.33■■□□□ 1.16
CCDC130-212ENST00000593174 ROBO1Q9Y6N7 1651 aa22.32■■□□□ 1.16
CCDC130-212ENST00000593174 RBM19Q9Y4C8 960 aaKnown RBP22.32■■□□□ 1.16
CCDC130-212ENST00000593174 KIF24Q5T7B8 1368 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms