RNA–Protein interactions for RNA: ENST00000593104.5

PRKCSH-220, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-220ENST00000593104 TULP4Q9NRJ4 1543 aa16.54■□□□□ 0.24
PRKCSH-220ENST00000593104 PAK3O75914 559 aaPredicted RBP16.53■□□□□ 0.24
PRKCSH-220ENST00000593104 COL14A1Q05707 1796 aaKnown RBP16.52■□□□□ 0.24
PRKCSH-220ENST00000593104 WASLO00401 505 aaPredicted RBP16.52■□□□□ 0.24
PRKCSH-220ENST00000593104 ARHGEF28Q8N1W1 1705 aaKnown RBP16.52■□□□□ 0.24
PRKCSH-220ENST00000593104 GPRASP1Q5JY77 1395 aa16.51■□□□□ 0.23
PRKCSH-220ENST00000593104 CHRNA2Q15822 529 aa16.51■□□□□ 0.23
PRKCSH-220ENST00000593104 NUTM2GQ5VZR2 741 aa16.51■□□□□ 0.23
PRKCSH-220ENST00000593104 NGDNQ8NEJ9 315 aaKnown RBP16.51■□□□□ 0.23
PRKCSH-220ENST00000593104 EN1Q05925 392 aaPredicted RBP16.5■□□□□ 0.23
PRKCSH-220ENST00000593104 ATP7BP35670 1465 aa16.48■□□□□ 0.23
PRKCSH-220ENST00000593104 SPATA31A5Q5VU36 1347 aa16.48■□□□□ 0.23
PRKCSH-220ENST00000593104 SPATA31A7Q8IWB4 1347 aa16.48■□□□□ 0.23
PRKCSH-220ENST00000593104 PRDM11Q9NQV5 511 aa16.48■□□□□ 0.23
PRKCSH-220ENST00000593104 STRN4Q9NRL3 753 aa16.48■□□□□ 0.23
PRKCSH-220ENST00000593104 THSD7AQ9UPZ6 1657 aa16.47■□□□□ 0.23
PRKCSH-220ENST00000593104 PHRF1Q9P1Y6 1649 aaKnown RBP16.47■□□□□ 0.23
PRKCSH-220ENST00000593104 KIAA0232Q92628 1395 aa16.47■□□□□ 0.23
PRKCSH-220ENST00000593104 TNS1Q9HBL0 1735 aaKnown RBP16.46■□□□□ 0.23
PRKCSH-220ENST00000593104 BAG6P46379 1132 aa16.46■□□□□ 0.23
PRKCSH-220ENST00000593104 ZC3H6P61129 1189 aaKnown RBP16.46■□□□□ 0.23
PRKCSH-220ENST00000593104 NUDT16Q96DE0 195 aaKnown RBP16.46■□□□□ 0.23
PRKCSH-220ENST00000593104 LRP5O75197 1615 aa16.45■□□□□ 0.22
PRKCSH-220ENST00000593104 USP35Q9P2H5 1018 aa16.45■□□□□ 0.22
PRKCSH-220ENST00000593104 RGPD1P0DJD0 1748 aa16.45■□□□□ 0.22
PRKCSH-220ENST00000593104 ITSN1Q15811 1721 aa16.45■□□□□ 0.22
PRKCSH-220ENST00000593104 EIF3AQ14152 1382 aaKnown RBP16.44■□□□□ 0.22
PRKCSH-220ENST00000593104 HRCP23327 699 aa16.44■□□□□ 0.22
PRKCSH-220ENST00000593104 R3HDM1Q15032 1099 aaKnown RBP16.43■□□□□ 0.22
PRKCSH-220ENST00000593104 EZH2Q15910 746 aaKnown RBP16.43■□□□□ 0.22
PRKCSH-220ENST00000593104 CDK19Q9BWU1 502 aa16.43■□□□□ 0.22
PRKCSH-220ENST00000593104 TOPAZ1Q8N9V7 1692 aa16.42■□□□□ 0.22
PRKCSH-220ENST00000593104 SPATA31A1Q5TZJ5 1347 aa16.42■□□□□ 0.22
PRKCSH-220ENST00000593104 TRIM37O94972 964 aa16.41■□□□□ 0.22
PRKCSH-220ENST00000593104 ACEP12821 1306 aa16.41■□□□□ 0.22
PRKCSH-220ENST00000593104 NBPF1Q3BBV0 1214 aa16.4■□□□□ 0.22
PRKCSH-220ENST00000593104 NRKQ7Z2Y5 1582 aa16.39■□□□□ 0.21
PRKCSH-220ENST00000593104 CAMTA1Q9Y6Y1 1673 aa16.38■□□□□ 0.21
PRKCSH-220ENST00000593104 NBPF8Q3BBV2 869 aa16.38■□□□□ 0.21
PRKCSH-220ENST00000593104 LARP1Q6PKG0 1096 aaKnown RBP16.38■□□□□ 0.21
PRKCSH-220ENST00000593104 POLR3AO14802 1390 aaPredicted RBP16.37■□□□□ 0.21
PRKCSH-220ENST00000593104 SSH2Q76I76 1423 aa16.36■□□□□ 0.21
PRKCSH-220ENST00000593104 ZBTB7CA1YPR0 619 aa16.35■□□□□ 0.21
PRKCSH-220ENST00000593104 EVA1CP58658 441 aa16.35■□□□□ 0.21
PRKCSH-220ENST00000593104 ABTB2Q8N961 1025 aa16.35■□□□□ 0.21
PRKCSH-220ENST00000593104 CAMKK2Q96RR4 588 aa16.35■□□□□ 0.21
PRKCSH-220ENST00000593104 CABP2Q9NPB3 220 aa16.35■□□□□ 0.21
PRKCSH-220ENST00000593104 DISP2A7MBM2 1401 aa16.35■□□□□ 0.21
PRKCSH-220ENST00000593104 LMO7Q8WWI1 1683 aa16.34■□□□□ 0.21
PRKCSH-220ENST00000593104 APBA3O96018 575 aa16.34■□□□□ 0.21
PRKCSH-220ENST00000593104 CCDC61Q9Y6R9 512 aa16.34■□□□□ 0.21
PRKCSH-220ENST00000593104 FAM196AQ6ZSG2 479 aa16.33■□□□□ 0.2
PRKCSH-220ENST00000593104 PLEKHG3A1L390 1219 aa16.32■□□□□ 0.2
PRKCSH-220ENST00000593104 SRPK2P78362 688 aaKnown RBP16.32■□□□□ 0.2
PRKCSH-220ENST00000593104 PPIP5K1Q6PFW1 1433 aa16.32■□□□□ 0.2
PRKCSH-220ENST00000593104 NUP188Q5SRE5 1749 aa16.31■□□□□ 0.2
PRKCSH-220ENST00000593104 KIAA1210Q9ULL0 1709 aa16.31■□□□□ 0.2
PRKCSH-220ENST00000593104 USP19O94966 1318 aa16.31■□□□□ 0.2
PRKCSH-220ENST00000593104 RREB1Q92766 1687 aa16.3■□□□□ 0.2
PRKCSH-220ENST00000593104 PDE3BQ13370 1112 aa16.3■□□□□ 0.2
PRKCSH-220ENST00000593104 BARGINQ6ZT62 677 aa16.3■□□□□ 0.2
PRKCSH-220ENST00000593104 STAC3Q96MF2 364 aa16.3■□□□□ 0.2
PRKCSH-220ENST00000593104 QRICH2Q9H0J4 1663 aa16.3■□□□□ 0.2
PRKCSH-220ENST00000593104 TCP11L2Q8N4U5 519 aa16.29■□□□□ 0.2
PRKCSH-220ENST00000593104 COL5A2P05997 1499 aaPredicted RBP16.29■□□□□ 0.2
PRKCSH-220ENST00000593104 CPDO75976 1380 aa16.28■□□□□ 0.2
PRKCSH-220ENST00000593104 GCP02774 474 aa16.28■□□□□ 0.2
PRKCSH-220ENST00000593104 CENPJQ9HC77 1338 aaPredicted RBP16.27■□□□□ 0.2
PRKCSH-220ENST00000593104 PTF1AQ7RTS3 328 aa16.27■□□□□ 0.2
PRKCSH-220ENST00000593104 CABP1Q9NZU7 370 aa16.27■□□□□ 0.2
PRKCSH-220ENST00000593104 NLRP13Q86W25 1043 aa16.26■□□□□ 0.19
PRKCSH-220ENST00000593104 PARP4Q9UKK3 1724 aaKnown RBP16.25■□□□□ 0.19
PRKCSH-220ENST00000593104 PIK3C2AO00443 1686 aa16.24■□□□□ 0.19
PRKCSH-220ENST00000593104 LRRC37A3O60309 1634 aa16.24■□□□□ 0.19
PRKCSH-220ENST00000593104 SOX12O15370 315 aa16.24■□□□□ 0.19
PRKCSH-220ENST00000593104 NLRP6P59044 892 aa16.24■□□□□ 0.19
PRKCSH-220ENST00000593104 USP6P35125 1406 aa16.24■□□□□ 0.19
PRKCSH-220ENST00000593104 PEAK1Q9H792 1746 aa16.23■□□□□ 0.19
PRKCSH-220ENST00000593104 COL18A1P39060 1754 aa16.23■□□□□ 0.19
PRKCSH-220ENST00000593104 RGPD5Q99666 1765 aa16.23■□□□□ 0.19
PRKCSH-220ENST00000593104 SBF2Q86WG5 1849 aa16.22■□□□□ 0.19
PRKCSH-220ENST00000593104 CRB1P82279 1406 aa16.22■□□□□ 0.19
PRKCSH-220ENST00000593104 SIN3AQ96ST3 1273 aa16.22■□□□□ 0.19
PRKCSH-220ENST00000593104 AXIN2Q9Y2T1 843 aa16.22■□□□□ 0.19
PRKCSH-220ENST00000593104 SLIT3O75094 1523 aa16.22■□□□□ 0.19
PRKCSH-220ENST00000593104 L3MBTL2Q969R5 705 aa16.21■□□□□ 0.19
PRKCSH-220ENST00000593104 PARD3Q8TEW0 1356 aa16.21■□□□□ 0.19
PRKCSH-220ENST00000593104 TOM1L2Q6ZVM7 507 aa16.2■□□□□ 0.18
PRKCSH-220ENST00000593104 ANO8Q9HCE9 1232 aaPredicted RBP16.2■□□□□ 0.18
PRKCSH-220ENST00000593104 THRAP3Q9Y2W1 955 aaKnown RBP16.2■□□□□ 0.18
PRKCSH-220ENST00000593104 WNK3Q9BYP7 1800 aa16.19■□□□□ 0.18
PRKCSH-220ENST00000593104 PDGFDQ9GZP0 370 aaPredicted RBP16.19■□□□□ 0.18
PRKCSH-220ENST00000593104 AATKQ6ZMQ8 1374 aa16.18■□□□□ 0.18
PRKCSH-220ENST00000593104 NBPF14Q5TI25 921 aa16.18■□□□□ 0.18
PRKCSH-220ENST00000593104 TRPM1Q7Z4N2 1603 aa16.18■□□□□ 0.18
PRKCSH-220ENST00000593104 OVOS2A0A0G2JMS6 1433 aa16.18■□□□□ 0.18
PRKCSH-220ENST00000593104 OVOS2A0A0J9YW53 1432 aa16.18■□□□□ 0.18
PRKCSH-220ENST00000593104 OVOS2Q6IE36 1432 aa16.18■□□□□ 0.18
PRKCSH-220ENST00000593104 DDB1Q16531 1140 aa16.17■□□□□ 0.18
PRKCSH-220ENST00000593104 AKAP12Q02952 1782 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms