RNA–Protein interactions for RNA: ENST00000593053.1

PRKCSH-218, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-218ENST00000593053 TRIM26Q12899 539 aaPredicted RBP18.76■□□□□ 0.59
PRKCSH-218ENST00000593053 VPS72Q15906 364 aa18.76■□□□□ 0.59
PRKCSH-218ENST00000593053 CCDC9Q9Y3X0 531 aaKnown RBP18.76■□□□□ 0.59
PRKCSH-218ENST00000593053 ITSN1Q15811 1721 aa18.76■□□□□ 0.59
PRKCSH-218ENST00000593053 ABCA3Q99758 1704 aa18.76■□□□□ 0.59
PRKCSH-218ENST00000593053 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.75■□□□□ 0.59
PRKCSH-218ENST00000593053 PPIP5K1Q6PFW1 1433 aa18.74■□□□□ 0.59
PRKCSH-218ENST00000593053 GLI3P10071 1580 aa18.73■□□□□ 0.59
PRKCSH-218ENST00000593053 NUTM2GQ5VZR2 741 aa18.73■□□□□ 0.59
PRKCSH-218ENST00000593053 BTG4Q9NY30 223 aa18.73■□□□□ 0.59
PRKCSH-218ENST00000593053 TRPM1Q7Z4N2 1603 aa18.73■□□□□ 0.59
PRKCSH-218ENST00000593053 TOPAZ1Q8N9V7 1692 aa18.73■□□□□ 0.59
PRKCSH-218ENST00000593053 PLCH1Q4KWH8 1693 aa18.71■□□□□ 0.59
PRKCSH-218ENST00000593053 PRDM11Q9NQV5 511 aa18.71■□□□□ 0.59
PRKCSH-218ENST00000593053 QRICH2Q9H0J4 1663 aa18.7■□□□□ 0.58
PRKCSH-218ENST00000593053 SEPT12Q8IYM1 358 aa18.7■□□□□ 0.58
PRKCSH-218ENST00000593053 EVC2Q86UK5 1308 aa18.7■□□□□ 0.58
PRKCSH-218ENST00000593053 TONSLQ96HA7 1378 aa18.69■□□□□ 0.58
PRKCSH-218ENST00000593053 ABTB2Q8N961 1025 aa18.69■□□□□ 0.58
PRKCSH-218ENST00000593053 CABP1Q9NZU7 370 aa18.69■□□□□ 0.58
PRKCSH-218ENST00000593053 NWD2Q9ULI1 1742 aa18.69■□□□□ 0.58
PRKCSH-218ENST00000593053 KIAA0232Q92628 1395 aa18.68■□□□□ 0.58
PRKCSH-218ENST00000593053 ZC3H6P61129 1189 aaKnown RBP18.68■□□□□ 0.58
PRKCSH-218ENST00000593053 CHRNA2Q15822 529 aa18.67■□□□□ 0.58
PRKCSH-218ENST00000593053 COL14A1Q05707 1796 aaKnown RBP18.66■□□□□ 0.58
PRKCSH-218ENST00000593053 ONECUT3O60422 494 aaPredicted RBP18.66■□□□□ 0.58
PRKCSH-218ENST00000593053 CARD11Q9BXL7 1154 aa18.66■□□□□ 0.58
PRKCSH-218ENST00000593053 CRYBG1Q9Y4K1 1723 aa18.66■□□□□ 0.58
PRKCSH-218ENST00000593053 A0A0G2JS52 829 aa18.65■□□□□ 0.58
PRKCSH-218ENST00000593053 MYT1Q01538 1121 aa18.65■□□□□ 0.58
PRKCSH-218ENST00000593053 FAM98CQ17RN3 349 aaKnown RBP18.65■□□□□ 0.58
PRKCSH-218ENST00000593053 EP400Q96L91 3159 aa18.64■□□□□ 0.57
PRKCSH-218ENST00000593053 NLRP13Q86W25 1043 aa18.64■□□□□ 0.57
PRKCSH-218ENST00000593053 USP19O94966 1318 aa18.64■□□□□ 0.57
PRKCSH-218ENST00000593053 BRD4O60885 1362 aaPredicted RBP18.64■□□□□ 0.57
PRKCSH-218ENST00000593053 NRAPQ86VF7 1730 aa18.63■□□□□ 0.57
PRKCSH-218ENST00000593053 SPATA31A5Q5VU36 1347 aa18.63■□□□□ 0.57
PRKCSH-218ENST00000593053 SPATA31A7Q8IWB4 1347 aa18.63■□□□□ 0.57
PRKCSH-218ENST00000593053 USP6P35125 1406 aa18.63■□□□□ 0.57
PRKCSH-218ENST00000593053 KRT27Q7Z3Y8 459 aa18.62■□□□□ 0.57
PRKCSH-218ENST00000593053 CCDC125Q86Z20 511 aa18.62■□□□□ 0.57
PRKCSH-218ENST00000593053 STRN4Q9NRL3 753 aa18.62■□□□□ 0.57
PRKCSH-218ENST00000593053 PHRF1Q9P1Y6 1649 aaKnown RBP18.62■□□□□ 0.57
PRKCSH-218ENST00000593053 GCP02774 474 aa18.6■□□□□ 0.57
PRKCSH-218ENST00000593053 NLRP6P59044 892 aa18.6■□□□□ 0.57
PRKCSH-218ENST00000593053 NRKQ7Z2Y5 1582 aa18.59■□□□□ 0.57
PRKCSH-218ENST00000593053 CPDO75976 1380 aa18.58■□□□□ 0.57
PRKCSH-218ENST00000593053 SBNO2Q9Y2G9 1366 aa18.58■□□□□ 0.57
PRKCSH-218ENST00000593053 BLMP54132 1417 aaPredicted RBP18.57■□□□□ 0.56
PRKCSH-218ENST00000593053 SSH2Q76I76 1423 aa18.57■□□□□ 0.56
PRKCSH-218ENST00000593053 SPATA31A1Q5TZJ5 1347 aa18.57■□□□□ 0.56
PRKCSH-218ENST00000593053 EVA1CP58658 441 aa18.57■□□□□ 0.56
PRKCSH-218ENST00000593053 ZNF692Q9BU19 519 aaPredicted RBP18.57■□□□□ 0.56
PRKCSH-218ENST00000593053 BRWD3Q6RI45 1802 aa18.56■□□□□ 0.56
PRKCSH-218ENST00000593053 TTC21BQ7Z4L5 1316 aa18.55■□□□□ 0.56
PRKCSH-218ENST00000593053 ZBTB7CA1YPR0 619 aa18.55■□□□□ 0.56
PRKCSH-218ENST00000593053 USP35Q9P2H5 1018 aa18.55■□□□□ 0.56
PRKCSH-218ENST00000593053 CAMTA1Q9Y6Y1 1673 aa18.54■□□□□ 0.56
PRKCSH-218ENST00000593053 SF3B2Q13435 895 aaKnown RBP18.54■□□□□ 0.56
PRKCSH-218ENST00000593053 LARP1Q6PKG0 1096 aaKnown RBP18.54■□□□□ 0.56
PRKCSH-218ENST00000593053 CPSF1Q10570 1443 aaKnown RBP18.54■□□□□ 0.56
PRKCSH-218ENST00000593053 FAM182BQ5T319 152 aa18.53■□□□□ 0.56
PRKCSH-218ENST00000593053 KTN1Q86UP2 1357 aaKnown RBP18.53■□□□□ 0.56
PRKCSH-218ENST00000593053 DEFB132Q7Z7B7 95 aa18.52■□□□□ 0.56
PRKCSH-218ENST00000593053 TTC21AQ8NDW8 1320 aa18.51■□□□□ 0.55
PRKCSH-218ENST00000593053 SLIT3O75094 1523 aa18.51■□□□□ 0.55
PRKCSH-218ENST00000593053 TMC1Q8TDI8 760 aa18.51■□□□□ 0.55
PRKCSH-218ENST00000593053 PIK3C2AO00443 1686 aa18.5■□□□□ 0.55
PRKCSH-218ENST00000593053 LMO7Q8WWI1 1683 aa18.5■□□□□ 0.55
PRKCSH-218ENST00000593053 ZRANB1Q9UGI0 708 aa18.5■□□□□ 0.55
PRKCSH-218ENST00000593053 THSD7AQ9UPZ6 1657 aa18.5■□□□□ 0.55
PRKCSH-218ENST00000593053 ST20-MTHFSA0A0A6YYL1 179 aa18.49■□□□□ 0.55
PRKCSH-218ENST00000593053 SOX12O15370 315 aa18.49■□□□□ 0.55
PRKCSH-218ENST00000593053 BARGINQ6ZT62 677 aa18.49■□□□□ 0.55
PRKCSH-218ENST00000593053 TCP11L2Q8N4U5 519 aa18.49■□□□□ 0.55
PRKCSH-218ENST00000593053 AATKQ6ZMQ8 1374 aa18.49■□□□□ 0.55
PRKCSH-218ENST00000593053 COL5A2P05997 1499 aaPredicted RBP18.49■□□□□ 0.55
PRKCSH-218ENST00000593053 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.48■□□□□ 0.55
PRKCSH-218ENST00000593053 KCNH5Q8NCM2 988 aa18.48■□□□□ 0.55
PRKCSH-218ENST00000593053 SLC12A5Q9H2X9 1139 aa18.48■□□□□ 0.55
PRKCSH-218ENST00000593053 HDGFL2Q7Z4V5 671 aaPredicted RBP18.47■□□□□ 0.55
PRKCSH-218ENST00000593053 TESK2Q96S53 571 aa18.47■□□□□ 0.55
PRKCSH-218ENST00000593053 PCGF6Q9BYE7 350 aa18.47■□□□□ 0.55
PRKCSH-218ENST00000593053 CD163L1Q9NR16 1453 aa18.46■□□□□ 0.55
PRKCSH-218ENST00000593053 AKAP12Q02952 1782 aa18.46■□□□□ 0.55
PRKCSH-218ENST00000593053 ARHGEF25Q86VW2 580 aa18.46■□□□□ 0.55
PRKCSH-218ENST00000593053 BAG6P46379 1132 aa18.45■□□□□ 0.54
PRKCSH-218ENST00000593053 NME9Q86XW9 330 aa18.45■□□□□ 0.54
PRKCSH-218ENST00000593053 PUS7Q96PZ0 661 aaKnown RBP18.45■□□□□ 0.54
PRKCSH-218ENST00000593053 AXIN2Q9Y2T1 843 aa18.45■□□□□ 0.54
PRKCSH-218ENST00000593053 THRAP3Q9Y2W1 955 aaKnown RBP18.45■□□□□ 0.54
PRKCSH-218ENST00000593053 CRB1P82279 1406 aa18.44■□□□□ 0.54
PRKCSH-218ENST00000593053 PDE3BQ13370 1112 aa18.44■□□□□ 0.54
PRKCSH-218ENST00000593053 TERF2IPQ9NYB0 399 aa18.44■□□□□ 0.54
PRKCSH-218ENST00000593053 FAM196AQ6ZSG2 479 aa18.43■□□□□ 0.54
PRKCSH-218ENST00000593053 TOM1L2Q6ZVM7 507 aa18.43■□□□□ 0.54
PRKCSH-218ENST00000593053 A0A1W2PP64 1363 aa18.42■□□□□ 0.54
PRKCSH-218ENST00000593053 USP31Q70CQ4 1352 aa18.42■□□□□ 0.54
PRKCSH-218ENST00000593053 EDC4Q6P2E9 1401 aaKnown RBP18.41■□□□□ 0.54
PRKCSH-218ENST00000593053 MON2Q7Z3U7 1717 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms