RNA–Protein interactions for RNA: ENST00000593048.5

CIRBP-241, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 650 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-241ENST00000593048 BTG4Q9NY30 223 aa23.2■■□□□ 1.3
CIRBP-241ENST00000593048 ACEP12821 1306 aa23.19■■□□□ 1.3
CIRBP-241ENST00000593048 SEPT12Q8IYM1 358 aa23.19■■□□□ 1.3
CIRBP-241ENST00000593048 BRWD3Q6RI45 1802 aa23.19■■□□□ 1.3
CIRBP-241ENST00000593048 ITSN1Q15811 1721 aa23.19■■□□□ 1.3
CIRBP-241ENST00000593048 A0A0G2JS52 829 aa23.18■■□□□ 1.3
CIRBP-241ENST00000593048 MYT1Q01538 1121 aa23.18■■□□□ 1.3
CIRBP-241ENST00000593048 NBPF8Q3BBV2 869 aa23.18■■□□□ 1.3
CIRBP-241ENST00000593048 ABCA3Q99758 1704 aa23.18■■□□□ 1.3
CIRBP-241ENST00000593048 ALS2Q96Q42 1657 aa23.17■■□□□ 1.3
CIRBP-241ENST00000593048 PLEKHG3A1L390 1219 aa23.17■■□□□ 1.3
CIRBP-241ENST00000593048 PRDM11Q9NQV5 511 aa23.17■■□□□ 1.3
CIRBP-241ENST00000593048 ZRANB1Q9UGI0 708 aa23.17■■□□□ 1.3
CIRBP-241ENST00000593048 PLCH1Q4KWH8 1693 aa23.16■■□□□ 1.3
CIRBP-241ENST00000593048 NUTM2GQ5VZR2 741 aa23.16■■□□□ 1.3
CIRBP-241ENST00000593048 NWD2Q9ULI1 1742 aa23.16■■□□□ 1.3
CIRBP-241ENST00000593048 CABP2Q9NPB3 220 aa23.15■■□□□ 1.3
CIRBP-241ENST00000593048 POLR3AO14802 1390 aaPredicted RBP23.14■■□□□ 1.3
CIRBP-241ENST00000593048 ONECUT3O60422 494 aaPredicted RBP23.13■■□□□ 1.29
CIRBP-241ENST00000593048 ABTB2Q8N961 1025 aa23.13■■□□□ 1.29
CIRBP-241ENST00000593048 BLMP54132 1417 aaPredicted RBP23.13■■□□□ 1.29
CIRBP-241ENST00000593048 FAM98CQ17RN3 349 aaKnown RBP23.12■■□□□ 1.29
CIRBP-241ENST00000593048 PPIP5K1Q6PFW1 1433 aa23.11■■□□□ 1.29
CIRBP-241ENST00000593048 KRT27Q7Z3Y8 459 aa23.11■■□□□ 1.29
CIRBP-241ENST00000593048 COL14A1Q05707 1796 aaKnown RBP23.11■■□□□ 1.29
CIRBP-241ENST00000593048 ZC3H6P61129 1189 aaKnown RBP23.1■■□□□ 1.29
CIRBP-241ENST00000593048 SF3B2Q13435 895 aaKnown RBP23.1■■□□□ 1.29
CIRBP-241ENST00000593048 ROCK2O75116 1388 aaKnown RBP23.1■■□□□ 1.29
CIRBP-241ENST00000593048 KIAA0232Q92628 1395 aa23.1■■□□□ 1.29
CIRBP-241ENST00000593048 CHRNA2Q15822 529 aa23.09■■□□□ 1.29
CIRBP-241ENST00000593048 CABP1Q9NZU7 370 aa23.08■■□□□ 1.29
CIRBP-241ENST00000593048 TOPAZ1Q8N9V7 1692 aa23.08■■□□□ 1.29
CIRBP-241ENST00000593048 EVC2Q86UK5 1308 aa23.08■■□□□ 1.28
CIRBP-241ENST00000593048 STRN4Q9NRL3 753 aa23.07■■□□□ 1.28
CIRBP-241ENST00000593048 NLRP13Q86W25 1043 aa23.06■■□□□ 1.28
CIRBP-241ENST00000593048 SPATA31A5Q5VU36 1347 aa23.06■■□□□ 1.28
CIRBP-241ENST00000593048 SPATA31A7Q8IWB4 1347 aa23.06■■□□□ 1.28
CIRBP-241ENST00000593048 EVA1CP58658 441 aa23.05■■□□□ 1.28
CIRBP-241ENST00000593048 QRICH2Q9H0J4 1663 aa23.05■■□□□ 1.28
CIRBP-241ENST00000593048 NRAPQ86VF7 1730 aa23.05■■□□□ 1.28
CIRBP-241ENST00000593048 CRYBG1Q9Y4K1 1723 aa23.03■■□□□ 1.28
CIRBP-241ENST00000593048 TRPM1Q7Z4N2 1603 aa23.03■■□□□ 1.28
CIRBP-241ENST00000593048 DEFB132Q7Z7B7 95 aa23.02■■□□□ 1.28
CIRBP-241ENST00000593048 BRD4O60885 1362 aaPredicted RBP23.01■■□□□ 1.27
CIRBP-241ENST00000593048 PHRF1Q9P1Y6 1649 aaKnown RBP23■■□□□ 1.27
CIRBP-241ENST00000593048 GCP02774 474 aa22.99■■□□□ 1.27
CIRBP-241ENST00000593048 NLRP6P59044 892 aa22.99■■□□□ 1.27
CIRBP-241ENST00000593048 USP35Q9P2H5 1018 aa22.99■■□□□ 1.27
CIRBP-241ENST00000593048 SPATA31A1Q5TZJ5 1347 aa22.99■■□□□ 1.27
CIRBP-241ENST00000593048 TRIM26Q12899 539 aaPredicted RBP22.98■■□□□ 1.27
CIRBP-241ENST00000593048 USP19O94966 1318 aa22.98■■□□□ 1.27
CIRBP-241ENST00000593048 TONSLQ96HA7 1378 aa22.98■■□□□ 1.27
CIRBP-241ENST00000593048 ZBTB7CA1YPR0 619 aa22.97■■□□□ 1.27
CIRBP-241ENST00000593048 CARD11Q9BXL7 1154 aa22.97■■□□□ 1.27
CIRBP-241ENST00000593048 USP6P35125 1406 aa22.97■■□□□ 1.27
CIRBP-241ENST00000593048 LRP5O75197 1615 aa22.97■■□□□ 1.27
CIRBP-241ENST00000593048 FAM182BQ5T319 152 aa22.96■■□□□ 1.27
CIRBP-241ENST00000593048 ZNF692Q9BU19 519 aaPredicted RBP22.96■■□□□ 1.27
CIRBP-241ENST00000593048 CPDO75976 1380 aa22.96■■□□□ 1.27
CIRBP-241ENST00000593048 BAG6P46379 1132 aa22.95■■□□□ 1.26
CIRBP-241ENST00000593048 NRKQ7Z2Y5 1582 aa22.94■■□□□ 1.26
CIRBP-241ENST00000593048 SSH2Q76I76 1423 aa22.93■■□□□ 1.26
CIRBP-241ENST00000593048 LARP1Q6PKG0 1096 aaKnown RBP22.93■■□□□ 1.26
CIRBP-241ENST00000593048 PDE3BQ13370 1112 aa22.9■■□□□ 1.26
CIRBP-241ENST00000593048 BARGINQ6ZT62 677 aa22.9■■□□□ 1.26
CIRBP-241ENST00000593048 TCP11L2Q8N4U5 519 aa22.9■■□□□ 1.26
CIRBP-241ENST00000593048 THSD7AQ9UPZ6 1657 aa22.9■■□□□ 1.26
CIRBP-241ENST00000593048 CAMTA1Q9Y6Y1 1673 aa22.9■■□□□ 1.26
CIRBP-241ENST00000593048 TTC21BQ7Z4L5 1316 aa22.89■■□□□ 1.26
CIRBP-241ENST00000593048 RGPD1P0DJD0 1748 aa22.89■■□□□ 1.26
CIRBP-241ENST00000593048 FAM196AQ6ZSG2 479 aa22.88■■□□□ 1.25
CIRBP-241ENST00000593048 THRAP3Q9Y2W1 955 aaKnown RBP22.87■■□□□ 1.25
CIRBP-241ENST00000593048 KTN1Q86UP2 1357 aaKnown RBP22.87■■□□□ 1.25
CIRBP-241ENST00000593048 TTC21AQ8NDW8 1320 aa22.86■■□□□ 1.25
CIRBP-241ENST00000593048 SOX12O15370 315 aa22.86■■□□□ 1.25
CIRBP-241ENST00000593048 EN1Q05925 392 aaPredicted RBP22.86■■□□□ 1.25
CIRBP-241ENST00000593048 TMC1Q8TDI8 760 aa22.86■■□□□ 1.25
CIRBP-241ENST00000593048 TNS1Q9HBL0 1735 aaKnown RBP22.85■■□□□ 1.25
CIRBP-241ENST00000593048 KCNH5Q8NCM2 988 aa22.85■■□□□ 1.25
CIRBP-241ENST00000593048 AATKQ6ZMQ8 1374 aa22.85■■□□□ 1.25
CIRBP-241ENST00000593048 SBNO2Q9Y2G9 1366 aa22.85■■□□□ 1.25
CIRBP-241ENST00000593048 LMO7Q8WWI1 1683 aa22.84■■□□□ 1.25
CIRBP-241ENST00000593048 COL5A2P05997 1499 aaPredicted RBP22.84■■□□□ 1.25
CIRBP-241ENST00000593048 TRIM37O94972 964 aa22.83■■□□□ 1.25
CIRBP-241ENST00000593048 TOM1L2Q6ZVM7 507 aa22.83■■□□□ 1.25
CIRBP-241ENST00000593048 SLIT3O75094 1523 aa22.82■■□□□ 1.24
CIRBP-241ENST00000593048 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.82■■□□□ 1.24
CIRBP-241ENST00000593048 DISP2A7MBM2 1401 aa22.82■■□□□ 1.24
CIRBP-241ENST00000593048 CPSF1Q10570 1443 aaKnown RBP22.82■■□□□ 1.24
CIRBP-241ENST00000593048 PIK3C2AO00443 1686 aa22.81■■□□□ 1.24
CIRBP-241ENST00000593048 HDGFL2Q7Z4V5 671 aaPredicted RBP22.81■■□□□ 1.24
CIRBP-241ENST00000593048 CRB1P82279 1406 aa22.81■■□□□ 1.24
CIRBP-241ENST00000593048 PSDA5PKW4 1024 aaPredicted RBP22.8■■□□□ 1.24
CIRBP-241ENST00000593048 ARHGEF25Q86VW2 580 aa22.79■■□□□ 1.24
CIRBP-241ENST00000593048 AXIN2Q9Y2T1 843 aa22.79■■□□□ 1.24
CIRBP-241ENST00000593048 APBA3O96018 575 aa22.78■■□□□ 1.24
CIRBP-241ENST00000593048 CSB-PGBD3P0DP91 1061 aa22.78■■□□□ 1.24
CIRBP-241ENST00000593048 SLC12A5Q9H2X9 1139 aa22.78■■□□□ 1.24
CIRBP-241ENST00000593048 AKAP12Q02952 1782 aa22.77■■□□□ 1.24
CIRBP-241ENST00000593048 EZH2Q15910 746 aaKnown RBP22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 137 ms