RNA–Protein interactions for RNA: ENST00000592354.5

CAPNS1-213, Transcript of calpain small subunit 1, humanhuman

TSL 2

Gene CAPNS1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-213ENST00000592354 NUDT16Q96DE0 195 aaKnown RBP19.57■□□□□ 0.72
CAPNS1-213ENST00000592354 TRPM1Q7Z4N2 1603 aa19.57■□□□□ 0.72
CAPNS1-213ENST00000592354 FAM83GA6ND36 823 aa19.55■□□□□ 0.72
CAPNS1-213ENST00000592354 VPS72Q15906 364 aa19.55■□□□□ 0.72
CAPNS1-213ENST00000592354 CDK19Q9BWU1 502 aa19.55■□□□□ 0.72
CAPNS1-213ENST00000592354 NRKQ7Z2Y5 1582 aa19.52■□□□□ 0.71
CAPNS1-213ENST00000592354 SEPT12Q8IYM1 358 aa19.51■□□□□ 0.71
CAPNS1-213ENST00000592354 BTG4Q9NY30 223 aa19.51■□□□□ 0.71
CAPNS1-213ENST00000592354 POLR3AO14802 1390 aaPredicted RBP19.51■□□□□ 0.71
CAPNS1-213ENST00000592354 ACEP12821 1306 aa19.5■□□□□ 0.71
CAPNS1-213ENST00000592354 A0A0G2JS52 829 aa19.49■□□□□ 0.71
CAPNS1-213ENST00000592354 MYT1Q01538 1121 aa19.49■□□□□ 0.71
CAPNS1-213ENST00000592354 NUTM2GQ5VZR2 741 aa19.49■□□□□ 0.71
CAPNS1-213ENST00000592354 SIN3AQ96ST3 1273 aa19.49■□□□□ 0.71
CAPNS1-213ENST00000592354 PPIP5K1Q6PFW1 1433 aa19.49■□□□□ 0.71
CAPNS1-213ENST00000592354 CENPJQ9HC77 1338 aaPredicted RBP19.49■□□□□ 0.71
CAPNS1-213ENST00000592354 L3MBTL2Q969R5 705 aa19.48■□□□□ 0.71
CAPNS1-213ENST00000592354 BLMP54132 1417 aaPredicted RBP19.48■□□□□ 0.71
CAPNS1-213ENST00000592354 KIAA0232Q92628 1395 aa19.47■□□□□ 0.71
CAPNS1-213ENST00000592354 THSD7AQ9UPZ6 1657 aa19.47■□□□□ 0.71
CAPNS1-213ENST00000592354 SRPK2P78362 688 aaKnown RBP19.47■□□□□ 0.71
CAPNS1-213ENST00000592354 PRDM11Q9NQV5 511 aa19.47■□□□□ 0.71
CAPNS1-213ENST00000592354 CCDC61Q9Y6R9 512 aa19.47■□□□□ 0.71
CAPNS1-213ENST00000592354 FAM98CQ17RN3 349 aaKnown RBP19.46■□□□□ 0.71
CAPNS1-213ENST00000592354 NEUROD1Q13562 356 aa19.45■□□□□ 0.7
CAPNS1-213ENST00000592354 CABP2Q9NPB3 220 aa19.45■□□□□ 0.7
CAPNS1-213ENST00000592354 CHRNA2Q15822 529 aa19.44■□□□□ 0.7
CAPNS1-213ENST00000592354 NBPF8Q3BBV2 869 aa19.44■□□□□ 0.7
CAPNS1-213ENST00000592354 CCDC125Q86Z20 511 aa19.44■□□□□ 0.7
CAPNS1-213ENST00000592354 ONECUT3O60422 494 aaPredicted RBP19.43■□□□□ 0.7
CAPNS1-213ENST00000592354 KRT27Q7Z3Y8 459 aa19.43■□□□□ 0.7
CAPNS1-213ENST00000592354 LMO7Q8WWI1 1683 aa19.43■□□□□ 0.7
CAPNS1-213ENST00000592354 PLEKHG3A1L390 1219 aa19.42■□□□□ 0.7
CAPNS1-213ENST00000592354 ZC3H6P61129 1189 aaKnown RBP19.42■□□□□ 0.7
CAPNS1-213ENST00000592354 SPATA31A5Q5VU36 1347 aa19.42■□□□□ 0.7
CAPNS1-213ENST00000592354 SPATA31A7Q8IWB4 1347 aa19.42■□□□□ 0.7
CAPNS1-213ENST00000592354 ROCK2O75116 1388 aaKnown RBP19.42■□□□□ 0.7
CAPNS1-213ENST00000592354 RGPD1P0DJD0 1748 aa19.42■□□□□ 0.7
CAPNS1-213ENST00000592354 PIK3C2AO00443 1686 aa19.41■□□□□ 0.7
CAPNS1-213ENST00000592354 DEFB132Q7Z7B7 95 aa19.4■□□□□ 0.7
CAPNS1-213ENST00000592354 TNS1Q9HBL0 1735 aaKnown RBP19.39■□□□□ 0.7
CAPNS1-213ENST00000592354 AKAP12Q02952 1782 aa19.39■□□□□ 0.7
CAPNS1-213ENST00000592354 ABTB2Q8N961 1025 aa19.39■□□□□ 0.69
CAPNS1-213ENST00000592354 STRN4Q9NRL3 753 aa19.39■□□□□ 0.69
CAPNS1-213ENST00000592354 ZRANB1Q9UGI0 708 aa19.39■□□□□ 0.69
CAPNS1-213ENST00000592354 USP19O94966 1318 aa19.38■□□□□ 0.69
CAPNS1-213ENST00000592354 USP6P35125 1406 aa19.38■□□□□ 0.69
CAPNS1-213ENST00000592354 SF3B2Q13435 895 aaKnown RBP19.38■□□□□ 0.69
CAPNS1-213ENST00000592354 CAMTA1Q9Y6Y1 1673 aa19.38■□□□□ 0.69
CAPNS1-213ENST00000592354 SSH2Q76I76 1423 aa19.37■□□□□ 0.69
CAPNS1-213ENST00000592354 FAM182BQ5T319 152 aa19.37■□□□□ 0.69
CAPNS1-213ENST00000592354 SPATA31A1Q5TZJ5 1347 aa19.36■□□□□ 0.69
CAPNS1-213ENST00000592354 CABP1Q9NZU7 370 aa19.35■□□□□ 0.69
CAPNS1-213ENST00000592354 SLIT3O75094 1523 aa19.35■□□□□ 0.69
CAPNS1-213ENST00000592354 EVC2Q86UK5 1308 aa19.34■□□□□ 0.69
CAPNS1-213ENST00000592354 USP35Q9P2H5 1018 aa19.34■□□□□ 0.69
CAPNS1-213ENST00000592354 CPDO75976 1380 aa19.33■□□□□ 0.69
CAPNS1-213ENST00000592354 MON2Q7Z3U7 1717 aa19.33■□□□□ 0.68
CAPNS1-213ENST00000592354 NLRP13Q86W25 1043 aa19.32■□□□□ 0.68
CAPNS1-213ENST00000592354 COL5A2P05997 1499 aaPredicted RBP19.31■□□□□ 0.68
CAPNS1-213ENST00000592354 WNK3Q9BYP7 1800 aa19.31■□□□□ 0.68
CAPNS1-213ENST00000592354 ZBTB7CA1YPR0 619 aa19.31■□□□□ 0.68
CAPNS1-213ENST00000592354 GCP02774 474 aa19.31■□□□□ 0.68
CAPNS1-213ENST00000592354 EVA1CP58658 441 aa19.31■□□□□ 0.68
CAPNS1-213ENST00000592354 BRD4O60885 1362 aaPredicted RBP19.31■□□□□ 0.68
CAPNS1-213ENST00000592354 LARP1Q6PKG0 1096 aaKnown RBP19.3■□□□□ 0.68
CAPNS1-213ENST00000592354 PARP4Q9UKK3 1724 aaKnown RBP19.3■□□□□ 0.68
CAPNS1-213ENST00000592354 COL18A1P39060 1754 aa19.29■□□□□ 0.68
CAPNS1-213ENST00000592354 RGPD5Q99666 1765 aa19.29■□□□□ 0.68
CAPNS1-213ENST00000592354 BAG6P46379 1132 aa19.28■□□□□ 0.68
CAPNS1-213ENST00000592354 NLRP6P59044 892 aa19.28■□□□□ 0.68
CAPNS1-213ENST00000592354 LRRC37A3O60309 1634 aa19.28■□□□□ 0.68
CAPNS1-213ENST00000592354 SRCAPQ6ZRS2 3230 aa19.28■□□□□ 0.68
CAPNS1-213ENST00000592354 TONSLQ96HA7 1378 aa19.27■□□□□ 0.68
CAPNS1-213ENST00000592354 CARD11Q9BXL7 1154 aa19.25■□□□□ 0.67
CAPNS1-213ENST00000592354 EN1Q05925 392 aaPredicted RBP19.24■□□□□ 0.67
CAPNS1-213ENST00000592354 BARGINQ6ZT62 677 aa19.24■□□□□ 0.67
CAPNS1-213ENST00000592354 TCP11L2Q8N4U5 519 aa19.24■□□□□ 0.67
CAPNS1-213ENST00000592354 LRP5O75197 1615 aa19.24■□□□□ 0.67
CAPNS1-213ENST00000592354 DISP2A7MBM2 1401 aa19.24■□□□□ 0.67
CAPNS1-213ENST00000592354 CRB1P82279 1406 aa19.24■□□□□ 0.67
CAPNS1-213ENST00000592354 CPSF1Q10570 1443 aaKnown RBP19.24■□□□□ 0.67
CAPNS1-213ENST00000592354 TTC21BQ7Z4L5 1316 aa19.24■□□□□ 0.67
CAPNS1-213ENST00000592354 KTN1Q86UP2 1357 aaKnown RBP19.23■□□□□ 0.67
CAPNS1-213ENST00000592354 SOX12O15370 315 aa19.23■□□□□ 0.67
CAPNS1-213ENST00000592354 NFAT5O94916 1531 aa19.23■□□□□ 0.67
CAPNS1-213ENST00000592354 RREB1Q92766 1687 aa19.23■□□□□ 0.67
CAPNS1-213ENST00000592354 AATKQ6ZMQ8 1374 aa19.22■□□□□ 0.67
CAPNS1-213ENST00000592354 SBNO2Q9Y2G9 1366 aa19.22■□□□□ 0.67
CAPNS1-213ENST00000592354 USP54Q70EL1 1684 aa19.22■□□□□ 0.67
CAPNS1-213ENST00000592354 PSDA5PKW4 1024 aaPredicted RBP19.22■□□□□ 0.67
CAPNS1-213ENST00000592354 TRIM37O94972 964 aa19.22■□□□□ 0.67
CAPNS1-213ENST00000592354 LTN1O94822 1766 aa19.21■□□□□ 0.67
CAPNS1-213ENST00000592354 NUP188Q5SRE5 1749 aa19.2■□□□□ 0.66
CAPNS1-213ENST00000592354 PEAK1Q9H792 1746 aa19.2■□□□□ 0.66
CAPNS1-213ENST00000592354 PDE3BQ13370 1112 aa19.2■□□□□ 0.66
CAPNS1-213ENST00000592354 FAM196AQ6ZSG2 479 aa19.2■□□□□ 0.66
CAPNS1-213ENST00000592354 CD163L1Q9NR16 1453 aa19.2■□□□□ 0.66
CAPNS1-213ENST00000592354 ZNF692Q9BU19 519 aaPredicted RBP19.19■□□□□ 0.66
CAPNS1-213ENST00000592354 TTC21AQ8NDW8 1320 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms