RNA–Protein interactions for RNA: ENST00000592078.1

CXXC1-217, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-217ENST00000592078 SPATA31A7Q8IWB4 1347 aa22.26■■□□□ 1.15
CXXC1-217ENST00000592078 WASLO00401 505 aaPredicted RBP22.25■■□□□ 1.15
CXXC1-217ENST00000592078 NGDNQ8NEJ9 315 aaKnown RBP22.25■■□□□ 1.15
CXXC1-217ENST00000592078 TULP4Q9NRJ4 1543 aa22.25■■□□□ 1.15
CXXC1-217ENST00000592078 DISP2A7MBM2 1401 aa22.24■■□□□ 1.15
CXXC1-217ENST00000592078 TRAK1Q9UPV9 953 aa22.23■■□□□ 1.15
CXXC1-217ENST00000592078 ALS2Q96Q42 1657 aa22.23■■□□□ 1.15
CXXC1-217ENST00000592078 NRAPQ86VF7 1730 aa22.23■■□□□ 1.15
CXXC1-217ENST00000592078 TRPM3Q9HCF6 1732 aaPredicted RBP22.23■■□□□ 1.15
CXXC1-217ENST00000592078 ADGRB1O14514 1584 aa22.22■■□□□ 1.15
CXXC1-217ENST00000592078 PLEKHG5O94827 1062 aa22.22■■□□□ 1.15
CXXC1-217ENST00000592078 PRDM11Q9NQV5 511 aa22.22■■□□□ 1.15
CXXC1-217ENST00000592078 RGPD1P0DJD0 1748 aa22.22■■□□□ 1.15
CXXC1-217ENST00000592078 FAM196AQ6ZSG2 479 aa22.2■■□□□ 1.14
CXXC1-217ENST00000592078 PARD3Q8TEW0 1356 aa22.2■■□□□ 1.14
CXXC1-217ENST00000592078 PAK3O75914 559 aaPredicted RBP22.19■■□□□ 1.14
CXXC1-217ENST00000592078 NEUROD1Q13562 356 aa22.19■■□□□ 1.14
CXXC1-217ENST00000592078 MINK1Q8N4C8 1332 aaPredicted RBP22.19■■□□□ 1.14
CXXC1-217ENST00000592078 C11orf95C9JLR9 678 aaPredicted RBP22.18■■□□□ 1.14
CXXC1-217ENST00000592078 HIRIP3Q9BW71 556 aaPredicted RBP22.18■■□□□ 1.14
CXXC1-217ENST00000592078 ZEB1P37275 1124 aaPredicted RBP22.17■■□□□ 1.14
CXXC1-217ENST00000592078 EN1Q05925 392 aaPredicted RBP22.17■■□□□ 1.14
CXXC1-217ENST00000592078 ATP7BP35670 1465 aa22.16■■□□□ 1.14
CXXC1-217ENST00000592078 PRR36Q9H6K5 1346 aa22.16■■□□□ 1.14
CXXC1-217ENST00000592078 DCAF11Q8TEB1 546 aa22.16■■□□□ 1.14
CXXC1-217ENST00000592078 SPATA31A1Q5TZJ5 1347 aa22.15■■□□□ 1.14
CXXC1-217ENST00000592078 PSDA5PKW4 1024 aaPredicted RBP22.15■■□□□ 1.14
CXXC1-217ENST00000592078 THSD7AQ9UPZ6 1657 aa22.14■■□□□ 1.14
CXXC1-217ENST00000592078 ITSN1Q15811 1721 aa22.14■■□□□ 1.13
CXXC1-217ENST00000592078 BARGINQ6ZT62 677 aa22.13■■□□□ 1.13
CXXC1-217ENST00000592078 NUDT16Q96DE0 195 aaKnown RBP22.13■■□□□ 1.13
CXXC1-217ENST00000592078 KDM2AQ9Y2K7 1162 aa22.12■■□□□ 1.13
CXXC1-217ENST00000592078 L3MBTL2Q969R5 705 aa22.11■■□□□ 1.13
CXXC1-217ENST00000592078 KIAA0232Q92628 1395 aa22.11■■□□□ 1.13
CXXC1-217ENST00000592078 EVA1CP58658 441 aa22.1■■□□□ 1.13
CXXC1-217ENST00000592078 PDE3BQ13370 1112 aa22.1■■□□□ 1.13
CXXC1-217ENST00000592078 R3HDM1Q15032 1099 aaKnown RBP22.1■■□□□ 1.13
CXXC1-217ENST00000592078 THRAP3Q9Y2W1 955 aaKnown RBP22.1■■□□□ 1.13
CXXC1-217ENST00000592078 CRYBG1Q9Y4K1 1723 aa22.1■■□□□ 1.13
CXXC1-217ENST00000592078 CCDC61Q9Y6R9 512 aa22.1■■□□□ 1.13
CXXC1-217ENST00000592078 NBPF8Q3BBV2 869 aa22.09■■□□□ 1.13
CXXC1-217ENST00000592078 NBPF14Q5TI25 921 aa22.09■■□□□ 1.13
CXXC1-217ENST00000592078 CAMKK2Q96RR4 588 aa22.09■■□□□ 1.13
CXXC1-217ENST00000592078 POLR3AO14802 1390 aaPredicted RBP22.09■■□□□ 1.13
CXXC1-217ENST00000592078 BRD4O60885 1362 aaPredicted RBP22.08■■□□□ 1.12
CXXC1-217ENST00000592078 TONSLQ96HA7 1378 aa22.08■■□□□ 1.12
CXXC1-217ENST00000592078 PLEKHG3A1L390 1219 aa22.07■■□□□ 1.12
CXXC1-217ENST00000592078 EZH2Q15910 746 aaKnown RBP22.07■■□□□ 1.12
CXXC1-217ENST00000592078 TRIM37O94972 964 aa22.06■■□□□ 1.12
CXXC1-217ENST00000592078 APBA3O96018 575 aa22.06■■□□□ 1.12
CXXC1-217ENST00000592078 STRN4Q9NRL3 753 aa22.06■■□□□ 1.12
CXXC1-217ENST00000592078 CPDO75976 1380 aa22.05■■□□□ 1.12
CXXC1-217ENST00000592078 FAM182BQ5T319 152 aa22.05■■□□□ 1.12
CXXC1-217ENST00000592078 CDK19Q9BWU1 502 aa22.05■■□□□ 1.12
CXXC1-217ENST00000592078 TNS1Q9HBL0 1735 aaKnown RBP22.05■■□□□ 1.12
CXXC1-217ENST00000592078 ZC3H6P61129 1189 aaKnown RBP22.04■■□□□ 1.12
CXXC1-217ENST00000592078 NLRP13Q86W25 1043 aa22.04■■□□□ 1.12
CXXC1-217ENST00000592078 TCP11L2Q8N4U5 519 aa22.04■■□□□ 1.12
CXXC1-217ENST00000592078 SSH2Q76I76 1423 aa22.03■■□□□ 1.12
CXXC1-217ENST00000592078 ACEP12821 1306 aa22.03■■□□□ 1.12
CXXC1-217ENST00000592078 CHRNA2Q15822 529 aa22.02■■□□□ 1.12
CXXC1-217ENST00000592078 ABTB2Q8N961 1025 aa22.02■■□□□ 1.12
CXXC1-217ENST00000592078 PHRF1Q9P1Y6 1649 aaKnown RBP22.02■■□□□ 1.11
CXXC1-217ENST00000592078 ARHGEF28Q8N1W1 1705 aaKnown RBP22.01■■□□□ 1.11
CXXC1-217ENST00000592078 DCAF8L1A6NGE4 600 aa22.01■■□□□ 1.11
CXXC1-217ENST00000592078 USP19O94966 1318 aa21.99■■□□□ 1.11
CXXC1-217ENST00000592078 USP35Q9P2H5 1018 aa21.98■■□□□ 1.11
CXXC1-217ENST00000592078 KIAA1210Q9ULL0 1709 aa21.97■■□□□ 1.11
CXXC1-217ENST00000592078 GCP02774 474 aa21.96■■□□□ 1.11
CXXC1-217ENST00000592078 SPON1Q9HCB6 807 aa21.95■■□□□ 1.1
CXXC1-217ENST00000592078 TOPAZ1Q8N9V7 1692 aa21.95■■□□□ 1.1
CXXC1-217ENST00000592078 NUTM2GQ5VZR2 741 aa21.94■■□□□ 1.1
CXXC1-217ENST00000592078 LARP1Q6PKG0 1096 aaKnown RBP21.94■■□□□ 1.1
CXXC1-217ENST00000592078 CAMTA1Q9Y6Y1 1673 aa21.94■■□□□ 1.1
CXXC1-217ENST00000592078 PLSCR1O15162 318 aa21.93■■□□□ 1.1
CXXC1-217ENST00000592078 RREB1Q92766 1687 aa21.92■■□□□ 1.1
CXXC1-217ENST00000592078 NRKQ7Z2Y5 1582 aa21.92■■□□□ 1.1
CXXC1-217ENST00000592078 SRPK2P78362 688 aaKnown RBP21.92■■□□□ 1.1
CXXC1-217ENST00000592078 CDCA7Q9BWT1 371 aaPredicted RBP21.92■■□□□ 1.1
CXXC1-217ENST00000592078 LMO7Q8WWI1 1683 aa21.91■■□□□ 1.1
CXXC1-217ENST00000592078 CRB1P82279 1406 aa21.91■■□□□ 1.1
CXXC1-217ENST00000592078 PPP1R1BQ9UD71 204 aaPredicted RBP21.91■■□□□ 1.1
CXXC1-217ENST00000592078 OVOS2A0A0G2JMS6 1433 aa21.9■■□□□ 1.1
CXXC1-217ENST00000592078 OVOS2A0A0J9YW53 1432 aa21.9■■□□□ 1.1
CXXC1-217ENST00000592078 OVOS2Q6IE36 1432 aa21.9■■□□□ 1.1
CXXC1-217ENST00000592078 KCNQ2O43526 872 aa21.9■■□□□ 1.1
CXXC1-217ENST00000592078 AATKQ6ZMQ8 1374 aa21.89■■□□□ 1.1
CXXC1-217ENST00000592078 NINLQ9Y2I6 1382 aa21.89■■□□□ 1.1
CXXC1-217ENST00000592078 COL5A2P05997 1499 aaPredicted RBP21.89■■□□□ 1.09
CXXC1-217ENST00000592078 PARP4Q9UKK3 1724 aaKnown RBP21.89■■□□□ 1.09
CXXC1-217ENST00000592078 PPIP5K1Q6PFW1 1433 aa21.89■■□□□ 1.09
CXXC1-217ENST00000592078 CENPJQ9HC77 1338 aaPredicted RBP21.88■■□□□ 1.09
CXXC1-217ENST00000592078 YY1P25490 414 aa21.87■■□□□ 1.09
CXXC1-217ENST00000592078 NUP188Q5SRE5 1749 aa21.86■■□□□ 1.09
CXXC1-217ENST00000592078 NLRP6P59044 892 aa21.86■■□□□ 1.09
CXXC1-217ENST00000592078 DDB1Q16531 1140 aa21.86■■□□□ 1.09
CXXC1-217ENST00000592078 RGPD3A6NKT7 1758 aaPredicted RBP21.86■■□□□ 1.09
CXXC1-217ENST00000592078 RGPD4Q7Z3J3 1758 aa21.86■■□□□ 1.09
CXXC1-217ENST00000592078 ZNF692Q9BU19 519 aaPredicted RBP21.85■■□□□ 1.09
CXXC1-217ENST00000592078 BCL11BQ9C0K0 894 aaPredicted RBP21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms