RNA–Protein interactions for RNA: ENST00000591648.1

TPGS2-216, Transcript of tubulin polyglutamylase complex subunit 2, humanhuman

TSL 2

Gene TPGS2, Length 790 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPGS2-216ENST00000591648 GJD4Q96KN9 370 aaPredicted RBP36.94■■■■□ 3.5
TPGS2-216ENST00000591648 FAM83GA6ND36 823 aa36.92■■■■□ 3.5
TPGS2-216ENST00000591648 NUTM2GQ5VZR2 741 aa36.91■■■■□ 3.5
TPGS2-216ENST00000591648 PLEKHG3A1L390 1219 aa36.89■■■■□ 3.5
TPGS2-216ENST00000591648 TNKS1BP1Q9C0C2 1729 aaKnown RBP36.89■■■■□ 3.5
TPGS2-216ENST00000591648 PLCH1Q4KWH8 1693 aa36.89■■■■□ 3.5
TPGS2-216ENST00000591648 POLR3AO14802 1390 aaPredicted RBP36.89■■■■□ 3.5
TPGS2-216ENST00000591648 PPIP5K1Q6PFW1 1433 aa36.88■■■■□ 3.49
TPGS2-216ENST00000591648 RALGAPBQ86X10 1494 aa36.88■■■■□ 3.49
TPGS2-216ENST00000591648 TONSLQ96HA7 1378 aa36.87■■■■□ 3.49
TPGS2-216ENST00000591648 CCDC9Q9Y3X0 531 aaKnown RBP36.85■■■■□ 3.49
TPGS2-216ENST00000591648 GLI3P10071 1580 aa36.85■■■■□ 3.49
TPGS2-216ENST00000591648 BTG4Q9NY30 223 aa36.81■■■■□ 3.48
TPGS2-216ENST00000591648 CABP1Q9NZU7 370 aa36.81■■■■□ 3.48
TPGS2-216ENST00000591648 CRYBG1Q9Y4K1 1723 aa36.81■■■■□ 3.48
TPGS2-216ENST00000591648 VPS72Q15906 364 aa36.8■■■■□ 3.48
TPGS2-216ENST00000591648 EVC2Q86UK5 1308 aa36.79■■■■□ 3.48
TPGS2-216ENST00000591648 NWD2Q9ULI1 1742 aa36.79■■■■□ 3.48
TPGS2-216ENST00000591648 ATAD2Q6PL18 1390 aa36.78■■■■□ 3.48
TPGS2-216ENST00000591648 CARD11Q9BXL7 1154 aa36.77■■■■□ 3.48
TPGS2-216ENST00000591648 ABTB2Q8N961 1025 aa36.76■■■■□ 3.48
TPGS2-216ENST00000591648 PRDM11Q9NQV5 511 aa36.75■■■■□ 3.47
TPGS2-216ENST00000591648 ZC3H6P61129 1189 aaKnown RBP36.74■■■■□ 3.47
TPGS2-216ENST00000591648 CHRNA2Q15822 529 aa36.74■■■■□ 3.47
TPGS2-216ENST00000591648 EP400Q96L91 3159 aa36.74■■■■□ 3.47
TPGS2-216ENST00000591648 COL14A1Q05707 1796 aaKnown RBP36.73■■■■□ 3.47
TPGS2-216ENST00000591648 KIAA0232Q92628 1395 aa36.73■■■■□ 3.47
TPGS2-216ENST00000591648 PHRF1Q9P1Y6 1649 aaKnown RBP36.72■■■■□ 3.47
TPGS2-216ENST00000591648 NRAPQ86VF7 1730 aa36.71■■■■□ 3.47
TPGS2-216ENST00000591648 SEPT12Q8IYM1 358 aa36.7■■■■□ 3.47
TPGS2-216ENST00000591648 USP6P35125 1406 aa36.66■■■■□ 3.46
TPGS2-216ENST00000591648 A0A0G2JS52 829 aa36.65■■■■□ 3.46
TPGS2-216ENST00000591648 MYT1Q01538 1121 aa36.65■■■■□ 3.46
TPGS2-216ENST00000591648 FAM98CQ17RN3 349 aaKnown RBP36.64■■■■□ 3.46
TPGS2-216ENST00000591648 BRWD3Q6RI45 1802 aa36.62■■■■□ 3.45
TPGS2-216ENST00000591648 NRKQ7Z2Y5 1582 aa36.61■■■■□ 3.45
TPGS2-216ENST00000591648 USP19O94966 1318 aa36.61■■■■□ 3.45
TPGS2-216ENST00000591648 NLRP13Q86W25 1043 aa36.61■■■■□ 3.45
TPGS2-216ENST00000591648 STRN4Q9NRL3 753 aa36.61■■■■□ 3.45
TPGS2-216ENST00000591648 ONECUT3O60422 494 aaPredicted RBP36.59■■■■□ 3.45
TPGS2-216ENST00000591648 SPATA31A5Q5VU36 1347 aa36.58■■■■□ 3.45
TPGS2-216ENST00000591648 SPATA31A7Q8IWB4 1347 aa36.58■■■■□ 3.45
TPGS2-216ENST00000591648 GCP02774 474 aa36.57■■■■□ 3.44
TPGS2-216ENST00000591648 NLRP6P59044 892 aa36.57■■■■□ 3.44
TPGS2-216ENST00000591648 BRD4O60885 1362 aaPredicted RBP36.55■■■■□ 3.44
TPGS2-216ENST00000591648 ZBTB7CA1YPR0 619 aa36.55■■■■□ 3.44
TPGS2-216ENST00000591648 SSH2Q76I76 1423 aa36.55■■■■□ 3.44
TPGS2-216ENST00000591648 PCGF6Q9BYE7 350 aa36.55■■■■□ 3.44
TPGS2-216ENST00000591648 SBNO2Q9Y2G9 1366 aa36.54■■■■□ 3.44
TPGS2-216ENST00000591648 KRT27Q7Z3Y8 459 aa36.53■■■■□ 3.44
TPGS2-216ENST00000591648 TTC21BQ7Z4L5 1316 aa36.51■■■■□ 3.43
TPGS2-216ENST00000591648 EVA1CP58658 441 aa36.5■■■■□ 3.43
TPGS2-216ENST00000591648 ZNF692Q9BU19 519 aaPredicted RBP36.5■■■■□ 3.43
TPGS2-216ENST00000591648 USP35Q9P2H5 1018 aa36.5■■■■□ 3.43
TPGS2-216ENST00000591648 PIK3C2AO00443 1686 aa36.5■■■■□ 3.43
TPGS2-216ENST00000591648 CPDO75976 1380 aa36.5■■■■□ 3.43
TPGS2-216ENST00000591648 CAMTA1Q9Y6Y1 1673 aa36.48■■■■□ 3.43
TPGS2-216ENST00000591648 TMC1Q8TDI8 760 aa36.48■■■■□ 3.43
TPGS2-216ENST00000591648 SPATA31A1Q5TZJ5 1347 aa36.48■■■■□ 3.43
TPGS2-216ENST00000591648 KTN1Q86UP2 1357 aaKnown RBP36.48■■■■□ 3.43
TPGS2-216ENST00000591648 CPSF1Q10570 1443 aaKnown RBP36.47■■■■□ 3.43
TPGS2-216ENST00000591648 AKAP12Q02952 1782 aa36.47■■■■□ 3.43
TPGS2-216ENST00000591648 FAM182BQ5T319 152 aa36.46■■■■□ 3.43
TPGS2-216ENST00000591648 ST20-MTHFSA0A0A6YYL1 179 aa36.45■■■■□ 3.43
TPGS2-216ENST00000591648 SOX12O15370 315 aa36.45■■■■□ 3.43
TPGS2-216ENST00000591648 LARP1Q6PKG0 1096 aaKnown RBP36.45■■■■□ 3.43
TPGS2-216ENST00000591648 CCDC125Q86Z20 511 aa36.44■■■■□ 3.42
TPGS2-216ENST00000591648 SLIT3O75094 1523 aa36.44■■■■□ 3.42
TPGS2-216ENST00000591648 LMO7Q8WWI1 1683 aa36.43■■■■□ 3.42
TPGS2-216ENST00000591648 SUGP2Q8IX01 1082 aaKnown RBP eCLIP36.42■■■■□ 3.42
TPGS2-216ENST00000591648 SLC12A5Q9H2X9 1139 aa36.42■■■■□ 3.42
TPGS2-216ENST00000591648 BLMP54132 1417 aaPredicted RBP36.41■■■■□ 3.42
TPGS2-216ENST00000591648 TESK2Q96S53 571 aa36.4■■■■□ 3.42
TPGS2-216ENST00000591648 ZRANB1Q9UGI0 708 aa36.4■■■■□ 3.42
TPGS2-216ENST00000591648 THSD7AQ9UPZ6 1657 aa36.39■■■■□ 3.42
TPGS2-216ENST00000591648 CD163L1Q9NR16 1453 aa36.39■■■■□ 3.42
TPGS2-216ENST00000591648 TTC21AQ8NDW8 1320 aa36.38■■■■□ 3.41
TPGS2-216ENST00000591648 DEFB132Q7Z7B7 95 aa36.38■■■■□ 3.41
TPGS2-216ENST00000591648 MON2Q7Z3U7 1717 aa36.35■■■■□ 3.41
TPGS2-216ENST00000591648 COL5A2P05997 1499 aaPredicted RBP36.35■■■■□ 3.41
TPGS2-216ENST00000591648 SF3B2Q13435 895 aaKnown RBP36.33■■■■□ 3.41
TPGS2-216ENST00000591648 HDGFL2Q7Z4V5 671 aaPredicted RBP36.33■■■■□ 3.41
TPGS2-216ENST00000591648 AATKQ6ZMQ8 1374 aa36.32■■■■□ 3.4
TPGS2-216ENST00000591648 NME9Q86XW9 330 aa36.32■■■■□ 3.4
TPGS2-216ENST00000591648 AXIN2Q9Y2T1 843 aa36.31■■■■□ 3.4
TPGS2-216ENST00000591648 USP47Q96K76 1375 aa36.3■■■■□ 3.4
TPGS2-216ENST00000591648 TCP11L2Q8N4U5 519 aa36.3■■■■□ 3.4
TPGS2-216ENST00000591648 A0A1W2PP64 1363 aa36.29■■■■□ 3.4
TPGS2-216ENST00000591648 KCNH5Q8NCM2 988 aa36.29■■■■□ 3.4
TPGS2-216ENST00000591648 BARGINQ6ZT62 677 aa36.28■■■■□ 3.4
TPGS2-216ENST00000591648 ARHGEF25Q86VW2 580 aa36.28■■■■□ 3.4
TPGS2-216ENST00000591648 TERF2IPQ9NYB0 399 aa36.26■■■■□ 3.4
TPGS2-216ENST00000591648 COL18A1P39060 1754 aa36.25■■■■□ 3.39
TPGS2-216ENST00000591648 PUS7Q96PZ0 661 aaKnown RBP36.25■■■■□ 3.39
TPGS2-216ENST00000591648 NFAT5O94916 1531 aa36.24■■■■□ 3.39
TPGS2-216ENST00000591648 CRB1P82279 1406 aa36.24■■■■□ 3.39
TPGS2-216ENST00000591648 TOM1L2Q6ZVM7 507 aa36.23■■■■□ 3.39
TPGS2-216ENST00000591648 EDC4Q6P2E9 1401 aaKnown RBP36.23■■■■□ 3.39
TPGS2-216ENST00000591648 CLSPNQ9HAW4 1339 aa36.22■■■■□ 3.39
TPGS2-216ENST00000591648 USP31Q70CQ4 1352 aa36.21■■■■□ 3.39
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms