RNA–Protein interactions for RNA: ENST00000591548.5

TUBD1-211, Transcript of tubulin delta 1, humanhuman

TSL 1 (best)

Gene TUBD1, Length 1,577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-211ENST00000591548 NME9Q86XW9 330 aa15.33■□□□□ 0.05
TUBD1-211ENST00000591548 ZNF335Q9H4Z2 1342 aaPredicted RBP15.33■□□□□ 0.04
TUBD1-211ENST00000591548 NGDNQ8NEJ9 315 aaKnown RBP15.32■□□□□ 0.04
TUBD1-211ENST00000591548 TTC21BQ7Z4L5 1316 aa15.32■□□□□ 0.04
TUBD1-211ENST00000591548 ZRANB1Q9UGI0 708 aa15.32■□□□□ 0.04
TUBD1-211ENST00000591548 PHF8Q9UPP1 1060 aa15.32■□□□□ 0.04
TUBD1-211ENST00000591548 DMRT2Q9Y5R5 561 aa15.32■□□□□ 0.04
TUBD1-211ENST00000591548 LRRC7Q96NW7 1537 aa15.3■□□□□ 0.04
TUBD1-211ENST00000591548 HNRNPUQ00839 825 aaKnown RBP eCLIP15.3■□□□□ 0.04
TUBD1-211ENST00000591548 XIRP1Q702N8 1843 aaKnown RBP15.3■□□□□ 0.04
TUBD1-211ENST00000591548 MTHFSP49914 203 aa15.29■□□□□ 0.04
TUBD1-211ENST00000591548 ESCO1Q5FWF5 840 aa15.29■□□□□ 0.04
TUBD1-211ENST00000591548 DCCP43146 1447 aa15.29■□□□□ 0.04
TUBD1-211ENST00000591548 ORAI2Q96SN7 254 aa15.28■□□□□ 0.04
TUBD1-211ENST00000591548 C1orf167Q5SNV9 1468 aa15.28■□□□□ 0.04
TUBD1-211ENST00000591548 MST1RQ04912 1400 aa15.27■□□□□ 0.03
TUBD1-211ENST00000591548 TTC21AQ8NDW8 1320 aa15.27■□□□□ 0.03
TUBD1-211ENST00000591548 SCAF1Q9H7N4 1312 aaKnown RBP15.27■□□□□ 0.03
TUBD1-211ENST00000591548 ATF3P18847 181 aa15.27■□□□□ 0.03
TUBD1-211ENST00000591548 COG3Q96JB2 828 aa15.27■□□□□ 0.03
TUBD1-211ENST00000591548 FBLN1P23142 703 aa15.26■□□□□ 0.03
TUBD1-211ENST00000591548 ADAMTS8Q9UP79 889 aa15.26■□□□□ 0.03
TUBD1-211ENST00000591548 OVOS2A0A0J9YW53 1432 aa15.25■□□□□ 0.03
TUBD1-211ENST00000591548 OVOS2Q6IE36 1432 aa15.25■□□□□ 0.03
TUBD1-211ENST00000591548 MSH6P52701 1360 aa15.25■□□□□ 0.03
TUBD1-211ENST00000591548 INSRP06213 1382 aa15.25■□□□□ 0.03
TUBD1-211ENST00000591548 CADPS2Q86UW7 1296 aa15.24■□□□□ 0.03
TUBD1-211ENST00000591548 PIK3C2AO00443 1686 aa15.24■□□□□ 0.03
TUBD1-211ENST00000591548 WDR43Q15061 677 aaKnown RBP eCLIP15.24■□□□□ 0.03
TUBD1-211ENST00000591548 POLKQ9UBT6 870 aa15.24■□□□□ 0.03
TUBD1-211ENST00000591548 SHPRHQ149N8 1683 aa15.23■□□□□ 0.03
TUBD1-211ENST00000591548 AATKQ6ZMQ8 1374 aa15.23■□□□□ 0.03
TUBD1-211ENST00000591548 USP31Q70CQ4 1352 aa15.23■□□□□ 0.03
TUBD1-211ENST00000591548 FOXO3O43524 673 aa15.23■□□□□ 0.03
TUBD1-211ENST00000591548 PSME1Q06323 249 aa15.23■□□□□ 0.03
TUBD1-211ENST00000591548 CFAP53Q96M91 514 aa15.23■□□□□ 0.03
TUBD1-211ENST00000591548 BLMP54132 1417 aaPredicted RBP15.23■□□□□ 0.03
TUBD1-211ENST00000591548 PNPLA6Q8IY17 1366 aa15.22■□□□□ 0.03
TUBD1-211ENST00000591548 KIF1AQ12756 1690 aa15.21■□□□□ 0.03
TUBD1-211ENST00000591548 COL3A1P02461 1466 aaPredicted RBP15.21■□□□□ 0.03
TUBD1-211ENST00000591548 ZBED9Q6R2W3 1325 aa15.21■□□□□ 0.02
TUBD1-211ENST00000591548 SMG6Q86US8 1419 aaKnown RBP15.2■□□□□ 0.02
TUBD1-211ENST00000591548 SENP3-EIF4A1A0A087X0R7 540 aa15.2■□□□□ 0.02
TUBD1-211ENST00000591548 PAK3O75914 559 aaPredicted RBP15.2■□□□□ 0.02
TUBD1-211ENST00000591548 EMILIN1Q9Y6C2 1016 aa15.2■□□□□ 0.02
TUBD1-211ENST00000591548 MAP2P11137 1827 aaKnown RBP15.2■□□□□ 0.02
TUBD1-211ENST00000591548 NLRP6P59044 892 aa15.19■□□□□ 0.02
TUBD1-211ENST00000591548 ABTB2Q8N961 1025 aa15.19■□□□□ 0.02
TUBD1-211ENST00000591548 MARF1Q9Y4F3 1742 aaKnown RBP15.19■□□□□ 0.02
TUBD1-211ENST00000591548 XPCQ01831 940 aaPredicted RBP15.19■□□□□ 0.02
TUBD1-211ENST00000591548 RRS1Q15050 365 aaKnown RBP15.19■□□□□ 0.02
TUBD1-211ENST00000591548 USP54Q70EL1 1684 aa15.18■□□□□ 0.02
TUBD1-211ENST00000591548 PPM1GO15355 546 aaPredicted RBP15.18■□□□□ 0.02
TUBD1-211ENST00000591548 NUTM2GQ5VZR2 741 aa15.18■□□□□ 0.02
TUBD1-211ENST00000591548 KRT28Q7Z3Y7 464 aa15.17■□□□□ 0.02
TUBD1-211ENST00000591548 TRPM3Q9HCF6 1732 aaPredicted RBP15.17■□□□□ 0.02
TUBD1-211ENST00000591548 CDK12Q9NYV4 1490 aaPredicted RBP15.16■□□□□ 0.02
TUBD1-211ENST00000591548 DDX17Q92841 729 aaKnown RBP15.16■□□□□ 0.02
TUBD1-211ENST00000591548 SLAIN2Q9P270 581 aa15.16■□□□□ 0.02
TUBD1-211ENST00000591548 LTBP4Q8N2S1 1624 aa15.16■□□□□ 0.02
TUBD1-211ENST00000591548 DIAPH1O60610 1272 aaKnown RBP15.15■□□□□ 0.02
TUBD1-211ENST00000591548 CCDC146Q8IYE0 955 aa15.15■□□□□ 0.02
TUBD1-211ENST00000591548 SOX12O15370 315 aa15.15■□□□□ 0.02
TUBD1-211ENST00000591548 BRINP3Q76B58 766 aa15.15■□□□□ 0.02
TUBD1-211ENST00000591548 PEAK1Q9H792 1746 aa15.13■□□□□ 0.01
TUBD1-211ENST00000591548 U2AF1L5P0DN76 240 aaPredicted RBP15.13■□□□□ 0.01
TUBD1-211ENST00000591548 U2AF1Q01081 240 aaKnown RBP eCLIP15.13■□□□□ 0.01
TUBD1-211ENST00000591548 NUDCQ9Y266 331 aa15.13■□□□□ 0.01
TUBD1-211ENST00000591548 MAP3K19Q56UN5 1328 aa15.13■□□□□ 0.01
TUBD1-211ENST00000591548 NPHP3Q7Z494 1330 aa15.13■□□□□ 0.01
TUBD1-211ENST00000591548 U2SURPO15042 1029 aaKnown RBP15.12■□□□□ 0.01
TUBD1-211ENST00000591548 SALL2Q9Y467 1007 aaPredicted RBP15.12■□□□□ 0.01
TUBD1-211ENST00000591548 PXDNQ92626 1479 aa15.11■□□□□ 0.01
TUBD1-211ENST00000591548 IL13P35225 146 aa15.11■□□□□ 0.01
TUBD1-211ENST00000591548 POTEDQ86YR6 584 aa15.11■□□□□ 0.01
TUBD1-211ENST00000591548 ALS2Q96Q42 1657 aa15.11■□□□□ 0.01
TUBD1-211ENST00000591548 APAF1O14727 1248 aa15.11■□□□□ 0.01
TUBD1-211ENST00000591548 SBNO1A3KN83 1393 aa15.1■□□□□ 0.01
TUBD1-211ENST00000591548 HSP90AB2PQ58FF8 381 aa15.1■□□□□ 0.01
TUBD1-211ENST00000591548 LMOD2Q6P5Q4 547 aa15.1■□□□□ 0.01
TUBD1-211ENST00000591548 RUNDC1Q96C34 613 aa15.1■□□□□ 0.01
TUBD1-211ENST00000591548 NFAT5O94916 1531 aa15.09■□□□□ 0.01
TUBD1-211ENST00000591548 USP19O94966 1318 aa15.09■□□□□ 0.01
TUBD1-211ENST00000591548 SLIT3O75094 1523 aa15.09■□□□□ 0.01
TUBD1-211ENST00000591548 EIF4A2Q14240 407 aaKnown RBP15.08■□□□□ 0
TUBD1-211ENST00000591548 PLEKHF1Q96S99 279 aa15.08■□□□□ 0
TUBD1-211ENST00000591548 FLT4P35916 1363 aa15.08■□□□□ 0
TUBD1-211ENST00000591548 KCNH5Q8NCM2 988 aa15.07■□□□□ 0
TUBD1-211ENST00000591548 IQSEC2Q5JU85 1478 aa15.07■□□□□ 0
TUBD1-211ENST00000591548 TNS3Q68CZ2 1445 aa15.07■□□□□ 0
TUBD1-211ENST00000591548 KIF24Q5T7B8 1368 aa15.07■□□□□ 0
TUBD1-211ENST00000591548 SOS2Q07890 1332 aaPredicted RBP15.07■□□□□ 0
TUBD1-211ENST00000591548 SPATA31A3Q5VYP0 1347 aa15.07■□□□□ 0
TUBD1-211ENST00000591548 GCP02774 474 aa15.07■□□□□ 0
TUBD1-211ENST00000591548 AMPHP49418 695 aa15.07■□□□□ 0
TUBD1-211ENST00000591548 TCP11L2Q8N4U5 519 aa15.07■□□□□ 0
TUBD1-211ENST00000591548 MED1Q15648 1581 aaPredicted RBP15.06■□□□□ 0
TUBD1-211ENST00000591548 ZNF521Q96K83 1311 aa15.06■□□□□ 0
TUBD1-211ENST00000591548 FCHSD2O94868 740 aa15.06■□□□□ 0
TUBD1-211ENST00000591548 HOXC9P31274 260 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms