RNA–Protein interactions for RNA: ENST00000591515.6

LSM7-206, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 2

Gene LSM7, Length 710 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM7-206	ENST00000591515	R3HDM1	Q15032	1099 aa	Known RBP	33.43	■■■□□ 2.94
LSM7-206	ENST00000591515	PRAM1	Q96QH2	718 aa		33.43	■■■□□ 2.94
LSM7-206	ENST00000591515	DLC1	Q96QB1	1528 aa		33.42	■■■□□ 2.94
LSM7-206	ENST00000591515	CFAP70	Q5T0N1	1121 aa		33.41	■■■□□ 2.94
LSM7-206	ENST00000591515	SPATA31A5	Q5VU36	1347 aa		33.39	■■■□□ 2.94
LSM7-206	ENST00000591515	SPATA31A7	Q8IWB4	1347 aa		33.39	■■■□□ 2.94
LSM7-206	ENST00000591515	STAC3	Q96MF2	364 aa		33.39	■■■□□ 2.94
LSM7-206	ENST00000591515	EZH2	Q15910	746 aa	Known RBP	33.33	■■■□□ 2.93
LSM7-206	ENST00000591515	GPRASP1	Q5JY77	1395 aa		33.32	■■■□□ 2.92
LSM7-206	ENST00000591515	POGK	Q9P215	609 aa		33.31	■■■□□ 2.92
LSM7-206	ENST00000591515	RREB1	Q92766	1687 aa		33.31	■■■□□ 2.92
LSM7-206	ENST00000591515	PRR36	Q9H6K5	1346 aa		33.3	■■■□□ 2.92
LSM7-206	ENST00000591515	ADGRB1	O14514	1584 aa		33.3	■■■□□ 2.92
LSM7-206	ENST00000591515	TULP4	Q9NRJ4	1543 aa		33.3	■■■□□ 2.92
LSM7-206	ENST00000591515	CLSPN	Q9HAW4	1339 aa		33.28	■■■□□ 2.92
LSM7-206	ENST00000591515	NEUROD1	Q13562	356 aa		33.28	■■■□□ 2.92
LSM7-206	ENST00000591515	PHRF1	Q9P1Y6	1649 aa	Known RBP	33.28	■■■□□ 2.92
LSM7-206	ENST00000591515	DCAF11	Q8TEB1	546 aa		33.27	■■■□□ 2.92
LSM7-206	ENST00000591515	HIRIP3	Q9BW71	556 aa	Predicted RBP	33.27	■■■□□ 2.92
LSM7-206	ENST00000591515	NUP188	Q5SRE5	1749 aa		33.27	■■■□□ 2.92
LSM7-206	ENST00000591515	CAMKK2	Q96RR4	588 aa		33.26	■■■□□ 2.91
LSM7-206	ENST00000591515	SIN3A	Q96ST3	1273 aa		33.26	■■■□□ 2.91
LSM7-206	ENST00000591515	PRDM11	Q9NQV5	511 aa		33.24	■■■□□ 2.91
LSM7-206	ENST00000591515	ITSN1	Q15811	1721 aa		33.23	■■■□□ 2.91
LSM7-206	ENST00000591515	SPATA31A1	Q5TZJ5	1347 aa		33.23	■■■□□ 2.91
LSM7-206	ENST00000591515	EIF3A	Q14152	1382 aa	Known RBP	33.22	■■■□□ 2.91
LSM7-206	ENST00000591515	TRIM37	O94972	964 aa		33.22	■■■□□ 2.91
LSM7-206	ENST00000591515	MINK1	Q8N4C8	1332 aa	Predicted RBP	33.22	■■■□□ 2.91
LSM7-206	ENST00000591515	KDM2A	Q9Y2K7	1162 aa		33.21	■■■□□ 2.91
LSM7-206	ENST00000591515	CCER1	Q8TC90	406 aa	Predicted RBP	33.2	■■■□□ 2.91
LSM7-206	ENST00000591515	FAM196A	Q6ZSG2	479 aa		33.19	■■■□□ 2.9
LSM7-206	ENST00000591515	TRAK1	Q9UPV9	953 aa		33.19	■■■□□ 2.9
LSM7-206	ENST00000591515	PARD3	Q8TEW0	1356 aa		33.19	■■■□□ 2.9
LSM7-206	ENST00000591515	KIAA0232	Q92628	1395 aa		33.19	■■■□□ 2.9
LSM7-206	ENST00000591515	PAK3	O75914	559 aa	Predicted RBP	33.17	■■■□□ 2.9
LSM7-206	ENST00000591515	TONSL	Q96HA7	1378 aa		33.17	■■■□□ 2.9
LSM7-206	ENST00000591515	NGDN	Q8NEJ9	315 aa	Known RBP	33.16	■■■□□ 2.9
LSM7-206	ENST00000591515	WASL	O00401	505 aa	Predicted RBP	33.15	■■■□□ 2.9
LSM7-206	ENST00000591515	APBA3	O96018	575 aa		33.15	■■■□□ 2.9
LSM7-206	ENST00000591515	CHRNA2	Q15822	529 aa		33.15	■■■□□ 2.9
LSM7-206	ENST00000591515	STRN4	Q9NRL3	753 aa		33.13	■■■□□ 2.89
LSM7-206	ENST00000591515	ARHGEF28	Q8N1W1	1705 aa	Known RBP	33.13	■■■□□ 2.89
LSM7-206	ENST00000591515	L3MBTL2	Q969R5	705 aa		33.12	■■■□□ 2.89
LSM7-206	ENST00000591515	ATP7B	P35670	1465 aa		33.12	■■■□□ 2.89
LSM7-206	ENST00000591515	YY1	P25490	414 aa		33.1	■■■□□ 2.89
LSM7-206	ENST00000591515	SSH2	Q76I76	1423 aa		33.08	■■■□□ 2.89
LSM7-206	ENST00000591515	NRK	Q7Z2Y5	1582 aa		33.07	■■■□□ 2.88
LSM7-206	ENST00000591515	TOPAZ1	Q8N9V7	1692 aa		33.07	■■■□□ 2.88
LSM7-206	ENST00000591515	ZC3H6	P61129	1189 aa	Known RBP	33.06	■■■□□ 2.88
LSM7-206	ENST00000591515	USP35	Q9P2H5	1018 aa		33.06	■■■□□ 2.88
LSM7-206	ENST00000591515	LMO7	Q8WWI1	1683 aa		33.06	■■■□□ 2.88
LSM7-206	ENST00000591515	CAMTA1	Q9Y6Y1	1673 aa		33.04	■■■□□ 2.88
LSM7-206	ENST00000591515	BARGIN	Q6ZT62	677 aa		33.04	■■■□□ 2.88
LSM7-206	ENST00000591515	PARP4	Q9UKK3	1724 aa	Known RBP	33.03	■■■□□ 2.88
LSM7-206	ENST00000591515	TIMELESS	Q9UNS1	1208 aa		33.03	■■■□□ 2.88
LSM7-206	ENST00000591515	PDE3B	Q13370	1112 aa		33.02	■■■□□ 2.88
LSM7-206	ENST00000591515	NUTM2G	Q5VZR2	741 aa		33.02	■■■□□ 2.88
LSM7-206	ENST00000591515	NBPF8	Q3BBV2	869 aa		33	■■■□□ 2.87
LSM7-206	ENST00000591515	NBPF14	Q5TI25	921 aa		33	■■■□□ 2.87
LSM7-206	ENST00000591515	NUDT16	Q96DE0	195 aa	Known RBP	33	■■■□□ 2.87
LSM7-206	ENST00000591515	KIAA1210	Q9ULL0	1709 aa		32.99	■■■□□ 2.87
LSM7-206	ENST00000591515	SBF2	Q86WG5	1849 aa		32.98	■■■□□ 2.87
LSM7-206	ENST00000591515	RGPD3	A6NKT7	1758 aa	Predicted RBP	32.97	■■■□□ 2.87
LSM7-206	ENST00000591515	RGPD4	Q7Z3J3	1758 aa		32.97	■■■□□ 2.87
LSM7-206	ENST00000591515	LARP1	Q6PKG0	1096 aa	Known RBP	32.97	■■■□□ 2.87
LSM7-206	ENST00000591515	EVA1C	P58658	441 aa		32.96	■■■□□ 2.87
LSM7-206	ENST00000591515	PEAK1	Q9H792	1746 aa		32.96	■■■□□ 2.87
LSM7-206	ENST00000591515	POLR3A	O14802	1390 aa	Predicted RBP	32.95	■■■□□ 2.86
LSM7-206	ENST00000591515	TCP11L2	Q8N4U5	519 aa		32.94	■■■□□ 2.86
LSM7-206	ENST00000591515	SPON1	Q9HCB6	807 aa		32.94	■■■□□ 2.86
LSM7-206	ENST00000591515	NINL	Q9Y2I6	1382 aa		32.94	■■■□□ 2.86
LSM7-206	ENST00000591515	PPP1R1B	Q9UD71	204 aa	Predicted RBP	32.93	■■■□□ 2.86
LSM7-206	ENST00000591515	CASZ1	Q86V15	1759 aa		32.92	■■■□□ 2.86
LSM7-206	ENST00000591515	CPD	O75976	1380 aa		32.92	■■■□□ 2.86
LSM7-206	ENST00000591515	KCNQ2	O43526	872 aa		32.91	■■■□□ 2.86
LSM7-206	ENST00000591515	ACE	P12821	1306 aa		32.9	■■■□□ 2.86
LSM7-206	ENST00000591515	USP19	O94966	1318 aa		32.88	■■■□□ 2.85
LSM7-206	ENST00000591515	LRRC37A3	O60309	1634 aa		32.88	■■■□□ 2.85
LSM7-206	ENST00000591515	COL5A2	P05997	1499 aa	Predicted RBP	32.87	■■■□□ 2.85
LSM7-206	ENST00000591515	CDK19	Q9BWU1	502 aa		32.87	■■■□□ 2.85
LSM7-206	ENST00000591515	THRAP3	Q9Y2W1	955 aa	Known RBP	32.86	■■■□□ 2.85
LSM7-206	ENST00000591515	WNK3	Q9BYP7	1800 aa		32.84	■■■□□ 2.85
LSM7-206	ENST00000591515	OVOS2	A0A0G2JMS6	1433 aa		32.84	■■■□□ 2.85
LSM7-206	ENST00000591515	OVOS2	A0A0J9YW53	1432 aa		32.84	■■■□□ 2.85
LSM7-206	ENST00000591515	OVOS2	Q6IE36	1432 aa		32.84	■■■□□ 2.85
LSM7-206	ENST00000591515	ABTB2	Q8N961	1025 aa		32.83	■■■□□ 2.85
LSM7-206	ENST00000591515	TRPM1	Q7Z4N2	1603 aa		32.82	■■■□□ 2.84
LSM7-206	ENST00000591515	PLEKHG3	A1L390	1219 aa		32.81	■■■□□ 2.84
LSM7-206	ENST00000591515	DCAF8L1	A6NGE4	600 aa		32.81	■■■□□ 2.84
LSM7-206	ENST00000591515	CCDC61	Q9Y6R9	512 aa		32.81	■■■□□ 2.84
LSM7-206	ENST00000591515	ROCK2	O75116	1388 aa	Known RBP	32.81	■■■□□ 2.84
LSM7-206	ENST00000591515	MYOM1	P52179	1685 aa		32.79	■■■□□ 2.84
LSM7-206	ENST00000591515	CRB1	P82279	1406 aa		32.79	■■■□□ 2.84
LSM7-206	ENST00000591515	ANO8	Q9HCE9	1232 aa	Predicted RBP	32.79	■■■□□ 2.84
LSM7-206	ENST00000591515	AKAP12	Q02952	1782 aa		32.78	■■■□□ 2.84
LSM7-206	ENST00000591515	C11orf95	C9JLR9	678 aa	Predicted RBP	32.77	■■■□□ 2.84
LSM7-206	ENST00000591515	GC	P02774	474 aa		32.77	■■■□□ 2.84
LSM7-206	ENST00000591515	NBPF1	Q3BBV0	1214 aa		32.77	■■■□□ 2.84
LSM7-206	ENST00000591515	PLSCR1	O15162	318 aa		32.75	■■■□□ 2.83
LSM7-206	ENST00000591515	UTRN	P46939	3433 aa		32.74	■■■□□ 2.83

Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms