RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 ZNF335Q9H4Z2 1342 aaPredicted RBP9.19□□□□□ -0.94
VPS4B-205ENST00000591383 PRAG1Q86YV5 1406 aa9.19□□□□□ -0.94
VPS4B-205ENST00000591383 NKTRP30414 1462 aaKnown RBP9.19□□□□□ -0.94
VPS4B-205ENST00000591383 CPS1P31327 1500 aa9.18□□□□□ -0.94
VPS4B-205ENST00000591383 PIP4P2Q8N4L2 257 aa9.18□□□□□ -0.94
VPS4B-205ENST00000591383 LTBP4Q8N2S1 1624 aa9.17□□□□□ -0.94
VPS4B-205ENST00000591383 L3MBTL2Q969R5 705 aa9.17□□□□□ -0.94
VPS4B-205ENST00000591383 PHF12Q96QT6 1004 aa9.17□□□□□ -0.94
VPS4B-205ENST00000591383 NALCNQ8IZF0 1738 aa9.17□□□□□ -0.94
VPS4B-205ENST00000591383 ARHGEF28Q8N1W1 1705 aaKnown RBP9.17□□□□□ -0.94
VPS4B-205ENST00000591383 METP08581 1390 aa9.16□□□□□ -0.94
VPS4B-205ENST00000591383 GOLGA2Q08379 1002 aa9.16□□□□□ -0.94
VPS4B-205ENST00000591383 TMEM106CQ9BVX2 250 aa9.16□□□□□ -0.94
VPS4B-205ENST00000591383 ADGRB1O14514 1584 aa9.16□□□□□ -0.94
VPS4B-205ENST00000591383 RALGAPBQ86X10 1494 aa9.15□□□□□ -0.94
VPS4B-205ENST00000591383 PTPRUQ92729 1446 aa9.15□□□□□ -0.94
VPS4B-205ENST00000591383 XIRP1Q702N8 1843 aaKnown RBP9.15□□□□□ -0.94
VPS4B-205ENST00000591383 PTCH1Q13635 1447 aa9.14□□□□□ -0.95
VPS4B-205ENST00000591383 PIK3R4Q99570 1358 aa9.14□□□□□ -0.95
VPS4B-205ENST00000591383 MLLT3P42568 568 aaPredicted RBP9.14□□□□□ -0.95
VPS4B-205ENST00000591383 RBM26Q5T8P6 1007 aaKnown RBP9.14□□□□□ -0.95
VPS4B-205ENST00000591383 YTHDC2Q9H6S0 1430 aaKnown RBP9.14□□□□□ -0.95
VPS4B-205ENST00000591383 QRICH2Q9H0J4 1663 aa9.13□□□□□ -0.95
VPS4B-205ENST00000591383 ROCK2O75116 1388 aaKnown RBP9.13□□□□□ -0.95
VPS4B-205ENST00000591383 CD44P16070 742 aaKnown RBP9.13□□□□□ -0.95
VPS4B-205ENST00000591383 CFAP70Q5T0N1 1121 aa9.13□□□□□ -0.95
VPS4B-205ENST00000591383 CHRDL2Q6WN34 429 aa9.13□□□□□ -0.95
VPS4B-205ENST00000591383 TBX22Q9Y458 520 aa9.13□□□□□ -0.95
VPS4B-205ENST00000591383 LRRC7Q96NW7 1537 aa9.13□□□□□ -0.95
VPS4B-205ENST00000591383 LRPPRCP42704 1394 aaKnown RBP9.12□□□□□ -0.95
VPS4B-205ENST00000591383 MKRN3Q13064 507 aaKnown RBP9.12□□□□□ -0.95
VPS4B-205ENST00000591383 HOMEZQ8IX15 550 aa9.12□□□□□ -0.95
VPS4B-205ENST00000591383 AK7Q96M32 723 aa9.12□□□□□ -0.95
VPS4B-205ENST00000591383 STK26Q9P289 416 aa9.12□□□□□ -0.95
VPS4B-205ENST00000591383 TRPC6Q9Y210 931 aa9.12□□□□□ -0.95
VPS4B-205ENST00000591383 DLC1Q96QB1 1528 aa9.11□□□□□ -0.95
VPS4B-205ENST00000591383 KCNA6P17658 529 aa9.11□□□□□ -0.95
VPS4B-205ENST00000591383 TMEM132EQ6IEE7 984 aa9.11□□□□□ -0.95
VPS4B-205ENST00000591383 GPIHBP1Q8IV16 184 aa9.11□□□□□ -0.95
VPS4B-205ENST00000591383 STAC3Q96MF2 364 aa9.11□□□□□ -0.95
VPS4B-205ENST00000591383 TECPR2O15040 1411 aa9.11□□□□□ -0.95
VPS4B-205ENST00000591383 TMEM94Q12767 1356 aa9.11□□□□□ -0.95
VPS4B-205ENST00000591383 ROBO2Q9HCK4 1378 aa9.11□□□□□ -0.95
VPS4B-205ENST00000591383 PPP1R15BQ5SWA1 713 aa9.1□□□□□ -0.95
VPS4B-205ENST00000591383 RBM33Q96EV2 1170 aaKnown RBP9.1□□□□□ -0.95
VPS4B-205ENST00000591383 C14orf93Q9H972 538 aaKnown RBP9.1□□□□□ -0.95
VPS4B-205ENST00000591383 GPHNQ9NQX3 736 aaPredicted RBP9.1□□□□□ -0.95
VPS4B-205ENST00000591383 AMOTL2Q9Y2J4 779 aa9.1□□□□□ -0.95
VPS4B-205ENST00000591383 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.09□□□□□ -0.95
VPS4B-205ENST00000591383 CDC42BPGQ6DT37 1551 aa9.09□□□□□ -0.95
VPS4B-205ENST00000591383 ADGRL3Q9HAR2 1447 aa9.09□□□□□ -0.95
VPS4B-205ENST00000591383 NBPF8Q3BBV2 869 aa9.09□□□□□ -0.95
VPS4B-205ENST00000591383 PROSER2Q86WR7 435 aaPredicted RBP9.09□□□□□ -0.95
VPS4B-205ENST00000591383 KRI1Q8N9T8 703 aaKnown RBP9.09□□□□□ -0.95
VPS4B-205ENST00000591383 GPBP1L1Q9HC44 474 aaPredicted RBP9.09□□□□□ -0.95
VPS4B-205ENST00000591383 IQSEC2Q5JU85 1478 aa9.08□□□□□ -0.96
VPS4B-205ENST00000591383 ADGRB2O60241 1585 aa9.08□□□□□ -0.96
VPS4B-205ENST00000591383 SAFB2Q14151 953 aaKnown RBP eCLIP9.08□□□□□ -0.96
VPS4B-205ENST00000591383 MS4A3Q96HJ5 214 aa9.08□□□□□ -0.96
VPS4B-205ENST00000591383 TRAK1Q9UPV9 953 aa9.08□□□□□ -0.96
VPS4B-205ENST00000591383 MSH6P52701 1360 aa9.08□□□□□ -0.96
VPS4B-205ENST00000591383 EIF3AQ14152 1382 aaKnown RBP9.08□□□□□ -0.96
VPS4B-205ENST00000591383 PLEKHH1Q9ULM0 1364 aa9.08□□□□□ -0.96
VPS4B-205ENST00000591383 FAM135BQ49AJ0 1406 aa9.07□□□□□ -0.96
VPS4B-205ENST00000591383 NBPF1Q3BBV0 1214 aa9.07□□□□□ -0.96
VPS4B-205ENST00000591383 ILDR1Q86SU0 546 aaPredicted RBP9.07□□□□□ -0.96
VPS4B-205ENST00000591383 FMN2Q9NZ56 1722 aa9.07□□□□□ -0.96
VPS4B-205ENST00000591383 ABCC11Q96J66 1382 aa9.07□□□□□ -0.96
VPS4B-205ENST00000591383 CERKQ8TCT0 537 aa9.06□□□□□ -0.96
VPS4B-205ENST00000591383 PRAM1Q96QH2 718 aa9.06□□□□□ -0.96
VPS4B-205ENST00000591383 CARD11Q9BXL7 1154 aa9.06□□□□□ -0.96
VPS4B-205ENST00000591383 POGKQ9P215 609 aa9.06□□□□□ -0.96
VPS4B-205ENST00000591383 GPRASP1Q5JY77 1395 aa9.06□□□□□ -0.96
VPS4B-205ENST00000591383 DPYSL4O14531 572 aa9.05□□□□□ -0.96
VPS4B-205ENST00000591383 EMILIN3Q9NT22 766 aa9.05□□□□□ -0.96
VPS4B-205ENST00000591383 DAXXQ9UER7 740 aaPredicted RBP9.05□□□□□ -0.96
VPS4B-205ENST00000591383 ITSN1Q15811 1721 aa9.05□□□□□ -0.96
VPS4B-205ENST00000591383 DCCP43146 1447 aa9.05□□□□□ -0.96
VPS4B-205ENST00000591383 USP47Q96K76 1375 aa9.04□□□□□ -0.96
VPS4B-205ENST00000591383 WAPLQ7Z5K2 1190 aa9.04□□□□□ -0.96
VPS4B-205ENST00000591383 IL27Q8NEV9 243 aa9.04□□□□□ -0.96
VPS4B-205ENST00000591383 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.04□□□□□ -0.965e-7■□□□□ 9.4
VPS4B-205ENST00000591383 TULP4Q9NRJ4 1543 aa9.04□□□□□ -0.96
VPS4B-205ENST00000591383 MINK1Q8N4C8 1332 aaPredicted RBP9.04□□□□□ -0.96
VPS4B-205ENST00000591383 CENPJQ9HC77 1338 aaPredicted RBP9.04□□□□□ -0.96
VPS4B-205ENST00000591383 ROBO1Q9Y6N7 1651 aa9.04□□□□□ -0.96
VPS4B-205ENST00000591383 SPDYE16A6NNV3 312 aaPredicted RBP9.03□□□□□ -0.96
VPS4B-205ENST00000591383 TRIM66O15016 1216 aa9.03□□□□□ -0.96
VPS4B-205ENST00000591383 PDIA6Q15084 440 aa9.03□□□□□ -0.96
VPS4B-205ENST00000591383 KDM4CQ9H3R0 1056 aa9.03□□□□□ -0.96
VPS4B-205ENST00000591383 NCOA3Q9Y6Q9 1424 aa9.03□□□□□ -0.96
VPS4B-205ENST00000591383 TOPAZ1Q8N9V7 1692 aa9.02□□□□□ -0.97
VPS4B-205ENST00000591383 TTLL13PA6NNM8 815 aa9.02□□□□□ -0.97
VPS4B-205ENST00000591383 UBAP1LF5GYI3 381 aa9.02□□□□□ -0.97
VPS4B-205ENST00000591383 ATF3P18847 181 aa9.02□□□□□ -0.97
VPS4B-205ENST00000591383 TIE1P35590 1138 aa9.02□□□□□ -0.97
VPS4B-205ENST00000591383 DSG2Q14126 1118 aa9.02□□□□□ -0.97
VPS4B-205ENST00000591383 HIRIP3Q9BW71 556 aaPredicted RBP9.02□□□□□ -0.97
VPS4B-205ENST00000591383 USP32Q8NFA0 1604 aa9.02□□□□□ -0.97
VPS4B-205ENST00000591383 RGPD8O14715 1765 aaPredicted RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms