RNA–Protein interactions for RNA: ENST00000590049.5

CAPNS1-209, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5

Gene CAPNS1, Length 592 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-209ENST00000590049 AATKQ6ZMQ8 1374 aa17.7■□□□□ 0.42
CAPNS1-209ENST00000590049 ABCA3Q99758 1704 aa17.69■□□□□ 0.42
CAPNS1-209ENST00000590049 IQGAP3Q86VI3 1631 aa17.69■□□□□ 0.42
CAPNS1-209ENST00000590049 SPATA31A1Q5TZJ5 1347 aa17.68■□□□□ 0.42
CAPNS1-209ENST00000590049 PLSCR1O15162 318 aa17.67■□□□□ 0.42
CAPNS1-209ENST00000590049 PSME1Q06323 249 aa17.67■□□□□ 0.42
CAPNS1-209ENST00000590049 LMOD2Q6P5Q4 547 aa17.67■□□□□ 0.42
CAPNS1-209ENST00000590049 ARHGEF10O15013 1369 aa17.66■□□□□ 0.42
CAPNS1-209ENST00000590049 RGPD3A6NKT7 1758 aaPredicted RBP17.66■□□□□ 0.42
CAPNS1-209ENST00000590049 COL14A1Q05707 1796 aaKnown RBP17.66■□□□□ 0.42
CAPNS1-209ENST00000590049 RGPD4Q7Z3J3 1758 aa17.66■□□□□ 0.42
CAPNS1-209ENST00000590049 NUTM2FA1L443 756 aa17.66■□□□□ 0.42
CAPNS1-209ENST00000590049 GRIN3BO60391 1043 aa17.66■□□□□ 0.42
CAPNS1-209ENST00000590049 JMYQ8N9B5 988 aa17.66■□□□□ 0.42
CAPNS1-209ENST00000590049 PRAG1Q86YV5 1406 aa17.65■□□□□ 0.42
CAPNS1-209ENST00000590049 ZNF526Q8TF50 670 aaPredicted RBP17.65■□□□□ 0.42
CAPNS1-209ENST00000590049 STK32BQ9NY57 414 aa17.64■□□□□ 0.41
CAPNS1-209ENST00000590049 KIF1AQ12756 1690 aa17.64■□□□□ 0.41
CAPNS1-209ENST00000590049 ZNF326Q5BKZ1 582 aaKnown RBP17.63■□□□□ 0.41
CAPNS1-209ENST00000590049 ANKRD30AQ9BXX3 1397 aa17.63■□□□□ 0.41
CAPNS1-209ENST00000590049 C11orf95C9JLR9 678 aaPredicted RBP17.62■□□□□ 0.41
CAPNS1-209ENST00000590049 KLRG1Q96E93 195 aa17.62■□□□□ 0.41
CAPNS1-209ENST00000590049 SBNO1A3KN83 1393 aa17.62■□□□□ 0.41
CAPNS1-209ENST00000590049 SLC15A2Q16348 729 aa17.6■□□□□ 0.41
CAPNS1-209ENST00000590049 KLHL34Q8N239 644 aa17.6■□□□□ 0.41
CAPNS1-209ENST00000590049 NAIPQ13075 1403 aa17.58■□□□□ 0.41
CAPNS1-209ENST00000590049 ADCY9O60503 1353 aa17.58■□□□□ 0.4
CAPNS1-209ENST00000590049 KIF3CO14782 793 aa17.57■□□□□ 0.4
CAPNS1-209ENST00000590049 BARGINQ6ZT62 677 aa17.57■□□□□ 0.4
CAPNS1-209ENST00000590049 PROM2Q8N271 834 aa17.57■□□□□ 0.4
CAPNS1-209ENST00000590049 YBX3P16989 372 aaKnown RBP eCLIP17.56■□□□□ 0.44e-7■■■□□ 18.5
CAPNS1-209ENST00000590049 TECPR2O15040 1411 aa17.55■□□□□ 0.4
CAPNS1-209ENST00000590049 DAPK1P53355 1430 aa17.55■□□□□ 0.4
CAPNS1-209ENST00000590049 CHIC2Q9UKJ5 165 aa17.55■□□□□ 0.4
CAPNS1-209ENST00000590049 PCNTO95613 3336 aa17.55■□□□□ 0.4
CAPNS1-209ENST00000590049 USP35Q9P2H5 1018 aa17.54■□□□□ 0.4
CAPNS1-209ENST00000590049 E9PCH4 1651 aa17.54■□□□□ 0.4
CAPNS1-209ENST00000590049 PRDM11Q9NQV5 511 aa17.53■□□□□ 0.4
CAPNS1-209ENST00000590049 STRN4Q9NRL3 753 aa17.52■□□□□ 0.4
CAPNS1-209ENST00000590049 PHF8Q9UPP1 1060 aa17.52■□□□□ 0.4
CAPNS1-209ENST00000590049 NLGN2Q8NFZ4 835 aa17.51■□□□□ 0.39
CAPNS1-209ENST00000590049 WDR90Q96KV7 1748 aa17.51■□□□□ 0.39
CAPNS1-209ENST00000590049 TOMM70O94826 608 aa17.5■□□□□ 0.39
CAPNS1-209ENST00000590049 PPARGC1BQ86YN6 1023 aaKnown RBP17.5■□□□□ 0.39
CAPNS1-209ENST00000590049 OVOS2A0A0G2JMS6 1433 aa17.49■□□□□ 0.39
CAPNS1-209ENST00000590049 OVOS2A0A0J9YW53 1432 aa17.49■□□□□ 0.39
CAPNS1-209ENST00000590049 OVOS2Q6IE36 1432 aa17.49■□□□□ 0.39
CAPNS1-209ENST00000590049 DHX57Q6P158 1386 aaKnown RBP17.49■□□□□ 0.39
CAPNS1-209ENST00000590049 TNS2Q63HR2 1409 aa17.48■□□□□ 0.39
CAPNS1-209ENST00000590049 POLD1P28340 1107 aa17.48■□□□□ 0.39
CAPNS1-209ENST00000590049 TXNRD1Q16881 649 aa17.48■□□□□ 0.39
CAPNS1-209ENST00000590049 FAM161AQ3B820 660 aa17.48■□□□□ 0.39
CAPNS1-209ENST00000590049 FMN2Q9NZ56 1722 aa17.47■□□□□ 0.39
CAPNS1-209ENST00000590049 ANKRD50Q9ULJ7 1429 aa17.47■□□□□ 0.39
CAPNS1-209ENST00000590049 HTRA3P83110 453 aa17.46■□□□□ 0.39
CAPNS1-209ENST00000590049 TCP11L2Q8N4U5 519 aa17.46■□□□□ 0.39
CAPNS1-209ENST00000590049 NRXN1Q9ULB1 1477 aa17.45■□□□□ 0.38
CAPNS1-209ENST00000590049 KANK4Q5T7N3 995 aaPredicted RBP17.45■□□□□ 0.38
CAPNS1-209ENST00000590049 PTF1AQ7RTS3 328 aa17.44■□□□□ 0.38
CAPNS1-209ENST00000590049 HSPA1AP0DMV8 641 aaKnown RBP17.43■□□□□ 0.38
CAPNS1-209ENST00000590049 HSPA1BP0DMV9 641 aaKnown RBP17.43■□□□□ 0.38
CAPNS1-209ENST00000590049 PEAK1Q9H792 1746 aa17.42■□□□□ 0.38
CAPNS1-209ENST00000590049 EVA1CP58658 441 aa17.42■□□□□ 0.38
CAPNS1-209ENST00000590049 WAPLQ7Z5K2 1190 aa17.42■□□□□ 0.38
CAPNS1-209ENST00000590049 VGFO15240 615 aaPredicted RBP17.41■□□□□ 0.38
CAPNS1-209ENST00000590049 SBF2Q86WG5 1849 aa17.4■□□□□ 0.38
CAPNS1-209ENST00000590049 SSH2Q76I76 1423 aa17.4■□□□□ 0.38
CAPNS1-209ENST00000590049 CHRNA2Q15822 529 aa17.4■□□□□ 0.38
CAPNS1-209ENST00000590049 THRAP3Q9Y2W1 955 aaKnown RBP17.4■□□□□ 0.38
CAPNS1-209ENST00000590049 KIAA0232Q92628 1395 aa17.4■□□□□ 0.38
CAPNS1-209ENST00000590049 SLC16A10Q8TF71 515 aa17.39■□□□□ 0.37
CAPNS1-209ENST00000590049 PARP4Q9UKK3 1724 aaKnown RBP17.38■□□□□ 0.37
CAPNS1-209ENST00000590049 ATP7BP35670 1465 aa17.37■□□□□ 0.37
CAPNS1-209ENST00000590049 LARP1Q6PKG0 1096 aaKnown RBP17.36■□□□□ 0.37
CAPNS1-209ENST00000590049 PMFBP1Q8TBY8 1022 aa17.36■□□□□ 0.37
CAPNS1-209ENST00000590049 ALS2Q96Q42 1657 aa17.35■□□□□ 0.37
CAPNS1-209ENST00000590049 RGPD8O14715 1765 aaPredicted RBP17.34■□□□□ 0.37
CAPNS1-209ENST00000590049 RBM46Q8TBY0 533 aaKnown RBP17.34■□□□□ 0.37
CAPNS1-209ENST00000590049 TRPM3Q9HCF6 1732 aaPredicted RBP17.33■□□□□ 0.37
CAPNS1-209ENST00000590049 TOPAZ1Q8N9V7 1692 aa17.33■□□□□ 0.37
CAPNS1-209ENST00000590049 PLEKHH1Q9ULM0 1364 aa17.33■□□□□ 0.36
CAPNS1-209ENST00000590049 STK26Q9P289 416 aa17.33■□□□□ 0.36
CAPNS1-209ENST00000590049 ARHGEF28Q8N1W1 1705 aaKnown RBP17.33■□□□□ 0.36
CAPNS1-209ENST00000590049 CRYBG1Q9Y4K1 1723 aa17.33■□□□□ 0.36
CAPNS1-209ENST00000590049 TULP4Q9NRJ4 1543 aa17.32■□□□□ 0.36
CAPNS1-209ENST00000590049 GPRASP1Q5JY77 1395 aa17.31■□□□□ 0.36
CAPNS1-209ENST00000590049 MLLT1Q03111 559 aaPredicted RBP17.31■□□□□ 0.36
CAPNS1-209ENST00000590049 CLTCL1P53675 1640 aa17.3■□□□□ 0.36
CAPNS1-209ENST00000590049 FSTL1Q12841 308 aa17.3■□□□□ 0.36
CAPNS1-209ENST00000590049 DDB1Q16531 1140 aa17.3■□□□□ 0.36
CAPNS1-209ENST00000590049 COL24A1Q17RW2 1714 aa17.3■□□□□ 0.36
CAPNS1-209ENST00000590049 BCL9O00512 1426 aa17.3■□□□□ 0.36
CAPNS1-209ENST00000590049 ZC3H6P61129 1189 aaKnown RBP17.29■□□□□ 0.36
CAPNS1-209ENST00000590049 ZNF827Q17R98 1081 aa17.29■□□□□ 0.36
CAPNS1-209ENST00000590049 PAPPAQ13219 1627 aa17.28■□□□□ 0.36
CAPNS1-209ENST00000590049 IFT172Q9UG01 1749 aa17.27■□□□□ 0.35
CAPNS1-209ENST00000590049 TRIM26Q12899 539 aaPredicted RBP17.26■□□□□ 0.35
CAPNS1-209ENST00000590049 C16orf71Q8IYS4 520 aaPredicted RBP17.26■□□□□ 0.35
CAPNS1-209ENST00000590049 NUP155O75694 1391 aa17.26■□□□□ 0.35
CAPNS1-209ENST00000590049 ABCC11Q96J66 1382 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms