RNA–Protein interactions for RNA: ENST00000589964.1

CROCCP3-203, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 3 BASIC

Gene CROCCP3, Length 255 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-203ENST00000589964 CENPJQ9HC77 1338 aaPredicted RBP24.34■■□□□ 1.49
CROCCP3-203ENST00000589964 EP400Q96L91 3159 aa24.34■■□□□ 1.49
CROCCP3-203ENST00000589964 NRAPQ86VF7 1730 aa24.33■■□□□ 1.49
CROCCP3-203ENST00000589964 PAK3O75914 559 aaPredicted RBP24.33■■□□□ 1.49
CROCCP3-203ENST00000589964 CABP2Q9NPB3 220 aa24.33■■□□□ 1.49
CROCCP3-203ENST00000589964 ACEP12821 1306 aa24.33■■□□□ 1.48
CROCCP3-203ENST00000589964 POLR3AO14802 1390 aaPredicted RBP24.32■■□□□ 1.48
CROCCP3-203ENST00000589964 NWD2Q9ULI1 1742 aa24.3■■□□□ 1.48
CROCCP3-203ENST00000589964 BRWD3Q6RI45 1802 aa24.29■■□□□ 1.48
CROCCP3-203ENST00000589964 PHRF1Q9P1Y6 1649 aaKnown RBP24.28■■□□□ 1.48
CROCCP3-203ENST00000589964 CCDC61Q9Y6R9 512 aa24.28■■□□□ 1.48
CROCCP3-203ENST00000589964 PLEKHG3A1L390 1219 aa24.27■■□□□ 1.48
CROCCP3-203ENST00000589964 VPS72Q15906 364 aa24.27■■□□□ 1.48
CROCCP3-203ENST00000589964 PPIP5K1Q6PFW1 1433 aa24.27■■□□□ 1.48
CROCCP3-203ENST00000589964 SRPK2P78362 688 aaKnown RBP24.26■■□□□ 1.47
CROCCP3-203ENST00000589964 ATAD2Q6PL18 1390 aa24.26■■□□□ 1.47
CROCCP3-203ENST00000589964 CHRNA2Q15822 529 aa24.25■■□□□ 1.47
CROCCP3-203ENST00000589964 BTG4Q9NY30 223 aa24.25■■□□□ 1.47
CROCCP3-203ENST00000589964 ROCK2O75116 1388 aaKnown RBP24.25■■□□□ 1.47
CROCCP3-203ENST00000589964 COL14A1Q05707 1796 aaKnown RBP24.24■■□□□ 1.47
CROCCP3-203ENST00000589964 KIAA0232Q92628 1395 aa24.24■■□□□ 1.47
CROCCP3-203ENST00000589964 NRKQ7Z2Y5 1582 aa24.22■■□□□ 1.47
CROCCP3-203ENST00000589964 SEPT12Q8IYM1 358 aa24.22■■□□□ 1.47
CROCCP3-203ENST00000589964 CCDC9Q9Y3X0 531 aaKnown RBP24.22■■□□□ 1.47
CROCCP3-203ENST00000589964 CABP1Q9NZU7 370 aa24.21■■□□□ 1.47
CROCCP3-203ENST00000589964 ZC3H6P61129 1189 aaKnown RBP24.2■■□□□ 1.46
CROCCP3-203ENST00000589964 PRDM11Q9NQV5 511 aa24.19■■□□□ 1.46
CROCCP3-203ENST00000589964 USP19O94966 1318 aa24.17■■□□□ 1.46
CROCCP3-203ENST00000589964 FAM98CQ17RN3 349 aaKnown RBP24.17■■□□□ 1.46
CROCCP3-203ENST00000589964 ONECUT3O60422 494 aaPredicted RBP24.16■■□□□ 1.46
CROCCP3-203ENST00000589964 TRIM26Q12899 539 aaPredicted RBP24.16■■□□□ 1.46
CROCCP3-203ENST00000589964 USP6P35125 1406 aa24.16■■□□□ 1.46
CROCCP3-203ENST00000589964 ABTB2Q8N961 1025 aa24.15■■□□□ 1.46
CROCCP3-203ENST00000589964 SSH2Q76I76 1423 aa24.15■■□□□ 1.46
CROCCP3-203ENST00000589964 SPATA31A5Q5VU36 1347 aa24.14■■□□□ 1.46
CROCCP3-203ENST00000589964 SPATA31A7Q8IWB4 1347 aa24.14■■□□□ 1.46
CROCCP3-203ENST00000589964 FAM182BQ5T319 152 aa24.14■■□□□ 1.45
CROCCP3-203ENST00000589964 CAMTA1Q9Y6Y1 1673 aa24.14■■□□□ 1.45
CROCCP3-203ENST00000589964 PIK3C2AO00443 1686 aa24.13■■□□□ 1.45
CROCCP3-203ENST00000589964 LMO7Q8WWI1 1683 aa24.12■■□□□ 1.45
CROCCP3-203ENST00000589964 THSD7AQ9UPZ6 1657 aa24.11■■□□□ 1.45
CROCCP3-203ENST00000589964 EVC2Q86UK5 1308 aa24.11■■□□□ 1.45
CROCCP3-203ENST00000589964 STRN4Q9NRL3 753 aa24.11■■□□□ 1.45
CROCCP3-203ENST00000589964 DEFB132Q7Z7B7 95 aa24.1■■□□□ 1.45
CROCCP3-203ENST00000589964 TONSLQ96HA7 1378 aa24.1■■□□□ 1.45
CROCCP3-203ENST00000589964 A0A0G2JS52 829 aa24.09■■□□□ 1.45
CROCCP3-203ENST00000589964 MYT1Q01538 1121 aa24.09■■□□□ 1.45
CROCCP3-203ENST00000589964 KRT27Q7Z3Y8 459 aa24.08■■□□□ 1.45
CROCCP3-203ENST00000589964 CARD11Q9BXL7 1154 aa24.08■■□□□ 1.45
CROCCP3-203ENST00000589964 AKAP12Q02952 1782 aa24.07■■□□□ 1.44
CROCCP3-203ENST00000589964 SLIT3O75094 1523 aa24.07■■□□□ 1.44
CROCCP3-203ENST00000589964 GCP02774 474 aa24.07■■□□□ 1.44
CROCCP3-203ENST00000589964 SPATA31A1Q5TZJ5 1347 aa24.07■■□□□ 1.44
CROCCP3-203ENST00000589964 CPDO75976 1380 aa24.06■■□□□ 1.44
CROCCP3-203ENST00000589964 LARP1Q6PKG0 1096 aaKnown RBP24.06■■□□□ 1.44
CROCCP3-203ENST00000589964 ZRANB1Q9UGI0 708 aa24.06■■□□□ 1.44
CROCCP3-203ENST00000589964 CD163L1Q9NR16 1453 aa24.06■■□□□ 1.44
CROCCP3-203ENST00000589964 BLMP54132 1417 aaPredicted RBP24.05■■□□□ 1.44
CROCCP3-203ENST00000589964 CPSF1Q10570 1443 aaKnown RBP24.04■■□□□ 1.44
CROCCP3-203ENST00000589964 USP35Q9P2H5 1018 aa24.04■■□□□ 1.44
CROCCP3-203ENST00000589964 ZBTB7CA1YPR0 619 aa24.03■■□□□ 1.44
CROCCP3-203ENST00000589964 NLRP6P59044 892 aa24.03■■□□□ 1.44
CROCCP3-203ENST00000589964 TTC21BQ7Z4L5 1316 aa24.03■■□□□ 1.44
CROCCP3-203ENST00000589964 NLRP13Q86W25 1043 aa24.02■■□□□ 1.44
CROCCP3-203ENST00000589964 SBNO2Q9Y2G9 1366 aa24.02■■□□□ 1.44
CROCCP3-203ENST00000589964 SRCAPQ6ZRS2 3230 aa24.01■■□□□ 1.43
CROCCP3-203ENST00000589964 COL5A2P05997 1499 aaPredicted RBP24■■□□□ 1.43
CROCCP3-203ENST00000589964 COL18A1P39060 1754 aa24■■□□□ 1.43
CROCCP3-203ENST00000589964 MON2Q7Z3U7 1717 aa23.99■■□□□ 1.43
CROCCP3-203ENST00000589964 SOX12O15370 315 aa23.99■■□□□ 1.43
CROCCP3-203ENST00000589964 TESK2Q96S53 571 aa23.98■■□□□ 1.43
CROCCP3-203ENST00000589964 BRD4O60885 1362 aaPredicted RBP23.98■■□□□ 1.43
CROCCP3-203ENST00000589964 SLC12A5Q9H2X9 1139 aa23.97■■□□□ 1.43
CROCCP3-203ENST00000589964 AXIN2Q9Y2T1 843 aa23.97■■□□□ 1.43
CROCCP3-203ENST00000589964 NFAT5O94916 1531 aa23.96■■□□□ 1.43
CROCCP3-203ENST00000589964 KTN1Q86UP2 1357 aaKnown RBP23.96■■□□□ 1.43
CROCCP3-203ENST00000589964 CCDC125Q86Z20 511 aa23.96■■□□□ 1.43
CROCCP3-203ENST00000589964 EVA1CP58658 441 aa23.95■■□□□ 1.42
CROCCP3-203ENST00000589964 ST20-MTHFSA0A0A6YYL1 179 aa23.94■■□□□ 1.42
CROCCP3-203ENST00000589964 NME9Q86XW9 330 aa23.94■■□□□ 1.42
CROCCP3-203ENST00000589964 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.94■■□□□ 1.42
CROCCP3-203ENST00000589964 TNS1Q9HBL0 1735 aaKnown RBP23.93■■□□□ 1.42
CROCCP3-203ENST00000589964 AATKQ6ZMQ8 1374 aa23.93■■□□□ 1.42
CROCCP3-203ENST00000589964 RGPD5Q99666 1765 aa23.92■■□□□ 1.42
CROCCP3-203ENST00000589964 ARHGEF25Q86VW2 580 aa23.91■■□□□ 1.42
CROCCP3-203ENST00000589964 TMC1Q8TDI8 760 aa23.91■■□□□ 1.42
CROCCP3-203ENST00000589964 A0A1W2PP64 1363 aa23.91■■□□□ 1.42
CROCCP3-203ENST00000589964 BARGINQ6ZT62 677 aa23.9■■□□□ 1.42
CROCCP3-203ENST00000589964 TCP11L2Q8N4U5 519 aa23.9■■□□□ 1.42
CROCCP3-203ENST00000589964 TTC21AQ8NDW8 1320 aa23.89■■□□□ 1.42
CROCCP3-203ENST00000589964 ZNF692Q9BU19 519 aaPredicted RBP23.89■■□□□ 1.41
CROCCP3-203ENST00000589964 EN1Q05925 392 aaPredicted RBP23.88■■□□□ 1.41
CROCCP3-203ENST00000589964 CRB1P82279 1406 aa23.87■■□□□ 1.41
CROCCP3-203ENST00000589964 TRIM37O94972 964 aa23.86■■□□□ 1.41
CROCCP3-203ENST00000589964 PCGF6Q9BYE7 350 aa23.86■■□□□ 1.41
CROCCP3-203ENST00000589964 RGPD1P0DJD0 1748 aa23.86■■□□□ 1.41
CROCCP3-203ENST00000589964 USP54Q70EL1 1684 aa23.86■■□□□ 1.41
CROCCP3-203ENST00000589964 LRRC37A3O60309 1634 aa23.85■■□□□ 1.41
CROCCP3-203ENST00000589964 USP31Q70CQ4 1352 aa23.85■■□□□ 1.41
CROCCP3-203ENST00000589964 PARP4Q9UKK3 1724 aaKnown RBP23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms