RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 TTC21BQ7Z4L5 1316 aa23.52■■□□□ 1.36
CXXC1-212ENST00000589940 ESCO1Q5FWF5 840 aa23.52■■□□□ 1.36
CXXC1-212ENST00000589940 CADPS2Q86UW7 1296 aa23.52■■□□□ 1.36
CXXC1-212ENST00000589940 C1orf167Q5SNV9 1468 aa23.51■■□□□ 1.35
CXXC1-212ENST00000589940 NME9Q86XW9 330 aa23.51■■□□□ 1.35
CXXC1-212ENST00000589940 PNISRQ8TF01 805 aaKnown RBP23.51■■□□□ 1.35
CXXC1-212ENST00000589940 MST1RQ04912 1400 aa23.5■■□□□ 1.35
CXXC1-212ENST00000589940 TNNT2P45379 298 aaPredicted RBP23.5■■□□□ 1.35
CXXC1-212ENST00000589940 FAM9BQ8IZU0 186 aa23.49■■□□□ 1.35
CXXC1-212ENST00000589940 TTC21AQ8NDW8 1320 aa23.48■■□□□ 1.35
CXXC1-212ENST00000589940 ORAI2Q96SN7 254 aa23.48■■□□□ 1.35
CXXC1-212ENST00000589940 COG3Q96JB2 828 aa23.45■■□□□ 1.35
CXXC1-212ENST00000589940 SCAF1Q9H7N4 1312 aaKnown RBP23.45■■□□□ 1.34
CXXC1-212ENST00000589940 KIF1AQ12756 1690 aa23.44■■□□□ 1.34
CXXC1-212ENST00000589940 ZRANB1Q9UGI0 708 aa23.44■■□□□ 1.34
CXXC1-212ENST00000589940 OVOS2A0A0J9YW53 1432 aa23.42■■□□□ 1.34
CXXC1-212ENST00000589940 OVOS2Q6IE36 1432 aa23.42■■□□□ 1.34
CXXC1-212ENST00000589940 MTHFSP49914 203 aa23.41■■□□□ 1.34
CXXC1-212ENST00000589940 PSME1Q06323 249 aa23.41■■□□□ 1.34
CXXC1-212ENST00000589940 AEBP2Q6ZN18 517 aaPredicted RBP23.4■■□□□ 1.34
CXXC1-212ENST00000589940 FOXO3O43524 673 aa23.4■■□□□ 1.34
CXXC1-212ENST00000589940 USP31Q70CQ4 1352 aa23.4■■□□□ 1.34
CXXC1-212ENST00000589940 AATKQ6ZMQ8 1374 aa23.39■■□□□ 1.33
CXXC1-212ENST00000589940 LTBP4Q8N2S1 1624 aa23.38■■□□□ 1.33
CXXC1-212ENST00000589940 PIK3C2AO00443 1686 aa23.38■■□□□ 1.33
CXXC1-212ENST00000589940 PAK3O75914 559 aaPredicted RBP23.37■■□□□ 1.33
CXXC1-212ENST00000589940 CFAP53Q96M91 514 aa23.37■■□□□ 1.33
CXXC1-212ENST00000589940 CENPBP07199 599 aaPredicted RBP23.35■■□□□ 1.33
CXXC1-212ENST00000589940 SLAIN2Q9P270 581 aa23.35■■□□□ 1.33
CXXC1-212ENST00000589940 HNRNPUQ00839 825 aaKnown RBP eCLIP23.35■■□□□ 1.33
CXXC1-212ENST00000589940 WDR43Q15061 677 aaKnown RBP eCLIP23.35■■□□□ 1.332e-7■■■■□ 19.5
CXXC1-212ENST00000589940 ABTB2Q8N961 1025 aa23.35■■□□□ 1.33
CXXC1-212ENST00000589940 INSRP06213 1382 aa23.34■■□□□ 1.33
CXXC1-212ENST00000589940 POLKQ9UBT6 870 aa23.34■■□□□ 1.33
CXXC1-212ENST00000589940 NLRP6P59044 892 aa23.33■■□□□ 1.33
CXXC1-212ENST00000589940 USP54Q70EL1 1684 aa23.33■■□□□ 1.33
CXXC1-212ENST00000589940 SMG6Q86US8 1419 aaKnown RBP23.33■■□□□ 1.33
CXXC1-212ENST00000589940 FBLN1P23142 703 aa23.33■■□□□ 1.33
CXXC1-212ENST00000589940 KRT28Q7Z3Y7 464 aa23.33■■□□□ 1.33
CXXC1-212ENST00000589940 XPCQ01831 940 aaPredicted RBP23.32■■□□□ 1.32
CXXC1-212ENST00000589940 BRINP3Q76B58 766 aa23.32■■□□□ 1.32
CXXC1-212ENST00000589940 PNPLA6Q8IY17 1366 aa23.32■■□□□ 1.32
CXXC1-212ENST00000589940 NPHP3Q7Z494 1330 aa23.31■■□□□ 1.32
CXXC1-212ENST00000589940 ADAMTS8Q9UP79 889 aa23.31■■□□□ 1.32
CXXC1-212ENST00000589940 TRPM3Q9HCF6 1732 aaPredicted RBP23.31■■□□□ 1.32
CXXC1-212ENST00000589940 MAP2P11137 1827 aaKnown RBP23.3■■□□□ 1.32
CXXC1-212ENST00000589940 COL3A1P02461 1466 aaPredicted RBP23.3■■□□□ 1.32
CXXC1-212ENST00000589940 SHPRHQ149N8 1683 aa23.29■■□□□ 1.32
CXXC1-212ENST00000589940 NUTM2GQ5VZR2 741 aa23.29■■□□□ 1.32
CXXC1-212ENST00000589940 EMILIN1Q9Y6C2 1016 aa23.29■■□□□ 1.32
CXXC1-212ENST00000589940 BLMP54132 1417 aaPredicted RBP23.28■■□□□ 1.32
CXXC1-212ENST00000589940 MARF1Q9Y4F3 1742 aaKnown RBP23.28■■□□□ 1.32
CXXC1-212ENST00000589940 RRS1Q15050 365 aaKnown RBP23.28■■□□□ 1.32
CXXC1-212ENST00000589940 CDK12Q9NYV4 1490 aaPredicted RBP23.28■■□□□ 1.32
CXXC1-212ENST00000589940 PPM1GO15355 546 aaPredicted RBP23.27■■□□□ 1.32
CXXC1-212ENST00000589940 DDX17Q92841 729 aaKnown RBP23.27■■□□□ 1.31
CXXC1-212ENST00000589940 SBNO1A3KN83 1393 aa23.26■■□□□ 1.31
CXXC1-212ENST00000589940 PXDNQ92626 1479 aa23.26■■□□□ 1.31
CXXC1-212ENST00000589940 SOX12O15370 315 aa23.24■■□□□ 1.31
CXXC1-212ENST00000589940 DIAPH1O60610 1272 aaKnown RBP23.23■■□□□ 1.31
CXXC1-212ENST00000589940 NUDCQ9Y266 331 aa23.23■■□□□ 1.31
CXXC1-212ENST00000589940 ALS2Q96Q42 1657 aa23.23■■□□□ 1.31
CXXC1-212ENST00000589940 ZBED9Q6R2W3 1325 aa23.23■■□□□ 1.31
CXXC1-212ENST00000589940 LMOD2Q6P5Q4 547 aa23.21■■□□□ 1.31
CXXC1-212ENST00000589940 MAP3K19Q56UN5 1328 aa23.21■■□□□ 1.31
CXXC1-212ENST00000589940 TNS3Q68CZ2 1445 aa23.21■■□□□ 1.31
CXXC1-212ENST00000589940 KCNH5Q8NCM2 988 aa23.2■■□□□ 1.3
CXXC1-212ENST00000589940 USP19O94966 1318 aa23.19■■□□□ 1.3
CXXC1-212ENST00000589940 SLIT3O75094 1523 aa23.19■■□□□ 1.3
CXXC1-212ENST00000589940 SOS2Q07890 1332 aaPredicted RBP23.19■■□□□ 1.3
CXXC1-212ENST00000589940 PEAK1Q9H792 1746 aa23.18■■□□□ 1.3
CXXC1-212ENST00000589940 NFAT5O94916 1531 aa23.18■■□□□ 1.3
CXXC1-212ENST00000589940 U2AF1L5P0DN76 240 aaPredicted RBP23.18■■□□□ 1.3
CXXC1-212ENST00000589940 U2AF1Q01081 240 aaKnown RBP eCLIP23.18■■□□□ 1.37e-6■■■■□ 20
CXXC1-212ENST00000589940 KIF24Q5T7B8 1368 aa23.18■■□□□ 1.3
CXXC1-212ENST00000589940 SPATA31A3Q5VYP0 1347 aa23.18■■□□□ 1.3
CXXC1-212ENST00000589940 FLT4P35916 1363 aa23.17■■□□□ 1.3
CXXC1-212ENST00000589940 U2SURPO15042 1029 aaKnown RBP23.17■■□□□ 1.3
CXXC1-212ENST00000589940 ARHGEF10O15013 1369 aa23.16■■□□□ 1.3
CXXC1-212ENST00000589940 NHSL1Q5SYE7 1610 aa23.16■■□□□ 1.3
CXXC1-212ENST00000589940 IL13P35225 146 aa23.16■■□□□ 1.3
CXXC1-212ENST00000589940 CCDC146Q8IYE0 955 aa23.15■■□□□ 1.3
CXXC1-212ENST00000589940 GCP02774 474 aa23.14■■□□□ 1.3
CXXC1-212ENST00000589940 AMPHP49418 695 aa23.14■■□□□ 1.3
CXXC1-212ENST00000589940 SENP3-EIF4A1A0A087X0R7 540 aa23.13■■□□□ 1.29
CXXC1-212ENST00000589940 HSP90AB2PQ58FF8 381 aa23.13■■□□□ 1.29
CXXC1-212ENST00000589940 RTL1A6NKG5 1358 aa23.13■■□□□ 1.29
CXXC1-212ENST00000589940 MED1Q15648 1581 aaPredicted RBP23.12■■□□□ 1.29
CXXC1-212ENST00000589940 ROBO1Q9Y6N7 1651 aa23.12■■□□□ 1.29
CXXC1-212ENST00000589940 RUNDC1Q96C34 613 aa23.12■■□□□ 1.29
CXXC1-212ENST00000589940 EIF4A2Q14240 407 aaKnown RBP23.11■■□□□ 1.29
CXXC1-212ENST00000589940 HOXC9P31274 260 aa23.1■■□□□ 1.29
CXXC1-212ENST00000589940 LTN1O94822 1766 aa23.1■■□□□ 1.29
CXXC1-212ENST00000589940 PLEKHG5O94827 1062 aa23.09■■□□□ 1.29
CXXC1-212ENST00000589940 PHRF1Q9P1Y6 1649 aaKnown RBP23.09■■□□□ 1.29
CXXC1-212ENST00000589940 TOM1O60784 492 aa23.09■■□□□ 1.29
CXXC1-212ENST00000589940 APAF1O14727 1248 aa23.08■■□□□ 1.29
CXXC1-212ENST00000589940 ARHGEF25Q86VW2 580 aa23.08■■□□□ 1.29
CXXC1-212ENST00000589940 IQSEC2Q5JU85 1478 aa23.08■■□□□ 1.28
CXXC1-212ENST00000589940 FCHSD2O94868 740 aa23.08■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms