RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 POLR3AO14802 1390 aaPredicted RBP20.66■□□□□ 0.9
MBD1-220ENST00000589758 TOPAZ1Q8N9V7 1692 aa20.65■□□□□ 0.9
MBD1-220ENST00000589758 PLEKHG3A1L390 1219 aa20.65■□□□□ 0.9
MBD1-220ENST00000589758 SIN3AQ96ST3 1273 aa20.65■□□□□ 0.9
MBD1-220ENST00000589758 COL14A1Q05707 1796 aaKnown RBP20.64■□□□□ 0.9
MBD1-220ENST00000589758 ACEP12821 1306 aa20.64■□□□□ 0.89
MBD1-220ENST00000589758 NBPF8Q3BBV2 869 aa20.64■□□□□ 0.89
MBD1-220ENST00000589758 ONECUT3O60422 494 aaPredicted RBP20.63■□□□□ 0.89
MBD1-220ENST00000589758 BTG4Q9NY30 223 aa20.63■□□□□ 0.89
MBD1-220ENST00000589758 CRYBG1Q9Y4K1 1723 aa20.63■□□□□ 0.89
MBD1-220ENST00000589758 SRPK2P78362 688 aaKnown RBP20.62■□□□□ 0.89
MBD1-220ENST00000589758 NEUROD1Q13562 356 aa20.62■□□□□ 0.89
MBD1-220ENST00000589758 SEPT12Q8IYM1 358 aa20.62■□□□□ 0.89
MBD1-220ENST00000589758 NRAPQ86VF7 1730 aa20.61■□□□□ 0.89
MBD1-220ENST00000589758 TRIM26Q12899 539 aaPredicted RBP20.61■□□□□ 0.89
MBD1-220ENST00000589758 PRDM11Q9NQV5 511 aa20.6■□□□□ 0.89
MBD1-220ENST00000589758 QRICH2Q9H0J4 1663 aa20.59■□□□□ 0.89
MBD1-220ENST00000589758 BRWD3Q6RI45 1802 aa20.59■□□□□ 0.89
MBD1-220ENST00000589758 TRPM1Q7Z4N2 1603 aa20.59■□□□□ 0.89
MBD1-220ENST00000589758 PPIP5K1Q6PFW1 1433 aa20.59■□□□□ 0.89
MBD1-220ENST00000589758 CABP2Q9NPB3 220 aa20.58■□□□□ 0.89
MBD1-220ENST00000589758 KRT27Q7Z3Y8 459 aa20.57■□□□□ 0.88
MBD1-220ENST00000589758 ABTB2Q8N961 1025 aa20.57■□□□□ 0.88
MBD1-220ENST00000589758 BRD4O60885 1362 aaPredicted RBP20.57■□□□□ 0.88
MBD1-220ENST00000589758 PHRF1Q9P1Y6 1649 aaKnown RBP20.56■□□□□ 0.88
MBD1-220ENST00000589758 BLMP54132 1417 aaPredicted RBP20.56■□□□□ 0.88
MBD1-220ENST00000589758 ROCK2O75116 1388 aaKnown RBP20.56■□□□□ 0.88
MBD1-220ENST00000589758 KIAA0232Q92628 1395 aa20.56■□□□□ 0.88
MBD1-220ENST00000589758 EVC2Q86UK5 1308 aa20.55■□□□□ 0.88
MBD1-220ENST00000589758 A0A0G2JS52 829 aa20.55■□□□□ 0.88
MBD1-220ENST00000589758 MYT1Q01538 1121 aa20.55■□□□□ 0.88
MBD1-220ENST00000589758 NUTM2GQ5VZR2 741 aa20.55■□□□□ 0.88
MBD1-220ENST00000589758 FAM98CQ17RN3 349 aaKnown RBP20.54■□□□□ 0.88
MBD1-220ENST00000589758 SPATA31A5Q5VU36 1347 aa20.53■□□□□ 0.88
MBD1-220ENST00000589758 SPATA31A7Q8IWB4 1347 aa20.53■□□□□ 0.88
MBD1-220ENST00000589758 ZC3H6P61129 1189 aaKnown RBP20.53■□□□□ 0.88
MBD1-220ENST00000589758 SF3B2Q13435 895 aaKnown RBP20.53■□□□□ 0.88
MBD1-220ENST00000589758 NLRP13Q86W25 1043 aa20.53■□□□□ 0.88
MBD1-220ENST00000589758 CABP1Q9NZU7 370 aa20.52■□□□□ 0.88
MBD1-220ENST00000589758 ZRANB1Q9UGI0 708 aa20.52■□□□□ 0.88
MBD1-220ENST00000589758 CHRNA2Q15822 529 aa20.51■□□□□ 0.87
MBD1-220ENST00000589758 USP19O94966 1318 aa20.51■□□□□ 0.87
MBD1-220ENST00000589758 NRKQ7Z2Y5 1582 aa20.49■□□□□ 0.87
MBD1-220ENST00000589758 CPDO75976 1380 aa20.48■□□□□ 0.87
MBD1-220ENST00000589758 USP6P35125 1406 aa20.48■□□□□ 0.87
MBD1-220ENST00000589758 EVA1CP58658 441 aa20.48■□□□□ 0.87
MBD1-220ENST00000589758 STRN4Q9NRL3 753 aa20.48■□□□□ 0.87
MBD1-220ENST00000589758 SPATA31A1Q5TZJ5 1347 aa20.48■□□□□ 0.87
MBD1-220ENST00000589758 GCP02774 474 aa20.47■□□□□ 0.87
MBD1-220ENST00000589758 EP400Q96L91 3159 aa20.46■□□□□ 0.87
MBD1-220ENST00000589758 ZNF692Q9BU19 519 aaPredicted RBP20.46■□□□□ 0.87
MBD1-220ENST00000589758 NLRP6P59044 892 aa20.45■□□□□ 0.86
MBD1-220ENST00000589758 TONSLQ96HA7 1378 aa20.45■□□□□ 0.86
MBD1-220ENST00000589758 THSD7AQ9UPZ6 1657 aa20.45■□□□□ 0.86
MBD1-220ENST00000589758 SSH2Q76I76 1423 aa20.44■□□□□ 0.86
MBD1-220ENST00000589758 DEFB132Q7Z7B7 95 aa20.43■□□□□ 0.86
MBD1-220ENST00000589758 CARD11Q9BXL7 1154 aa20.43■□□□□ 0.86
MBD1-220ENST00000589758 LMO7Q8WWI1 1683 aa20.42■□□□□ 0.86
MBD1-220ENST00000589758 CAMTA1Q9Y6Y1 1673 aa20.42■□□□□ 0.86
MBD1-220ENST00000589758 BAG6P46379 1132 aa20.42■□□□□ 0.86
MBD1-220ENST00000589758 BARGINQ6ZT62 677 aa20.42■□□□□ 0.86
MBD1-220ENST00000589758 SBNO2Q9Y2G9 1366 aa20.42■□□□□ 0.86
MBD1-220ENST00000589758 SLIT3O75094 1523 aa20.4■□□□□ 0.86
MBD1-220ENST00000589758 USP35Q9P2H5 1018 aa20.4■□□□□ 0.86
MBD1-220ENST00000589758 TTC21AQ8NDW8 1320 aa20.39■□□□□ 0.85
MBD1-220ENST00000589758 LARP1Q6PKG0 1096 aaKnown RBP20.39■□□□□ 0.85
MBD1-220ENST00000589758 THRAP3Q9Y2W1 955 aaKnown RBP20.39■□□□□ 0.85
MBD1-220ENST00000589758 AKAP12Q02952 1782 aa20.39■□□□□ 0.85
MBD1-220ENST00000589758 TTC21BQ7Z4L5 1316 aa20.38■□□□□ 0.85
MBD1-220ENST00000589758 TCP11L2Q8N4U5 519 aa20.38■□□□□ 0.85
MBD1-220ENST00000589758 RGPD1P0DJD0 1748 aa20.38■□□□□ 0.85
MBD1-220ENST00000589758 PIK3C2AO00443 1686 aa20.38■□□□□ 0.85
MBD1-220ENST00000589758 CPSF1Q10570 1443 aaKnown RBP20.37■□□□□ 0.85
MBD1-220ENST00000589758 AATKQ6ZMQ8 1374 aa20.37■□□□□ 0.85
MBD1-220ENST00000589758 FAM182BQ5T319 152 aa20.37■□□□□ 0.85
MBD1-220ENST00000589758 FAM196AQ6ZSG2 479 aa20.37■□□□□ 0.85
MBD1-220ENST00000589758 PCGF6Q9BYE7 350 aa20.37■□□□□ 0.85
MBD1-220ENST00000589758 COL5A2P05997 1499 aaPredicted RBP20.37■□□□□ 0.85
MBD1-220ENST00000589758 KCNH5Q8NCM2 988 aa20.36■□□□□ 0.85
MBD1-220ENST00000589758 KTN1Q86UP2 1357 aaKnown RBP20.35■□□□□ 0.85
MBD1-220ENST00000589758 ZBTB7CA1YPR0 619 aa20.35■□□□□ 0.85
MBD1-220ENST00000589758 PDE3BQ13370 1112 aa20.35■□□□□ 0.85
MBD1-220ENST00000589758 CRB1P82279 1406 aa20.34■□□□□ 0.85
MBD1-220ENST00000589758 DISP2A7MBM2 1401 aa20.32■□□□□ 0.84
MBD1-220ENST00000589758 EN1Q05925 392 aaPredicted RBP20.31■□□□□ 0.84
MBD1-220ENST00000589758 ARHGEF25Q86VW2 580 aa20.31■□□□□ 0.84
MBD1-220ENST00000589758 PUS7Q96PZ0 661 aaKnown RBP20.31■□□□□ 0.84
MBD1-220ENST00000589758 MON2Q7Z3U7 1717 aa20.3■□□□□ 0.84
MBD1-220ENST00000589758 SRCAPQ6ZRS2 3230 aa20.3■□□□□ 0.84
MBD1-220ENST00000589758 SLC24A1O60721 1099 aa20.3■□□□□ 0.84
MBD1-220ENST00000589758 HDGFL2Q7Z4V5 671 aaPredicted RBP20.3■□□□□ 0.84
MBD1-220ENST00000589758 COL18A1P39060 1754 aa20.3■□□□□ 0.84
MBD1-220ENST00000589758 C11orf95C9JLR9 678 aaPredicted RBP20.29■□□□□ 0.84
MBD1-220ENST00000589758 TRIM37O94972 964 aa20.29■□□□□ 0.84
MBD1-220ENST00000589758 TOM1L2Q6ZVM7 507 aa20.29■□□□□ 0.84
MBD1-220ENST00000589758 TMC1Q8TDI8 760 aa20.29■□□□□ 0.84
MBD1-220ENST00000589758 TNS1Q9HBL0 1735 aaKnown RBP20.29■□□□□ 0.84
MBD1-220ENST00000589758 WDR17Q8IZU2 1322 aa20.27■□□□□ 0.84
MBD1-220ENST00000589758 PARP4Q9UKK3 1724 aaKnown RBP20.27■□□□□ 0.84
MBD1-220ENST00000589758 AXIN2Q9Y2T1 843 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms